ubxn7 (ubxn7,LOC107677685,LOC107553259,LOC107732947,LOC107710610,LOC107563300,LOC107700557)


Basic Information

Item Value
gene id ubxn7
gene name ubxn7,LOC107677685,LOC107553259,LOC107732947,LOC107710610,LOC107563300,LOC107700557
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 8537215 ~ 8545646 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224561.1
CATGCGTGCAGTCGTGTTGTTGTCAGTGGCGGCAAGATGGCGACTCTCGGAGACGCATCAGCCCCGGGGGTTAATGGGTTAATACAACAGTTCACAGCCATAACTGGAGCCACAGAGAGTGTAGGGAAGCATATGTTGGAAGCATGTAACAACAACCTAGAGATGGCCGTCACCATGTTTCTAGACGGAGGGGGCATCGCAGAGGAACCCAGCACGAGCGCCAGTTCAGCCGGGGCGTCCAGCAGCAGACACCCCCCCGTAGAAGATGATGTGCGAGCGCCCATTCCTCAGAAGCAGGACATTCTGGTGGAGCCTGAGCCCTTGTTTGGAGTACCAAAGAGGCGTAGACCAGCGCGATCGATCTTTGATGGATTTCGTGATTTTCAGACGGAAACAATGCGACAGGAGCAGGAGCTGAGAAACGGAAGTGCGATGGACAAGAAGCTGAGCACTCTAGCCGATCTGTTCCGTCCCCCCATTGAACTCATGCACAAAGGCAGCTTTGAGACGGCGAAAGACTCCGGTCAGCTTGAGAACAAATGGCTGATGATCAACATTCAGAATGTCCAGGATTTCGCCTGTCAGTGTCTAAACCGAGACGtgtggagcaatgatgctgtgAAAAACATCATCAGAGAGCACTTCATATTCTGGCAGGTGTACCATGACAGTGAGGAAGGGCAGAGGTACATTCAGTTCTACAAGCTTAACAAGTTCCCATATATATCTATCCTGGACCCTCGTACAGGACAAAAGATGGTTGAGTGGAACCAGTTAGACGTGACCTCATTCTTGGATCAGGTCACAGGCTTCCTGTCAGAGCACGGGCAGCTGGATGGGCAGTCCAGTCAACCTCCGGCCAAACGGGCTCGTTCTGAGAGTCTGATAGATGCCAGTGAGGACAGTCAGTTAGAGGCCGCCATCCGGGCCTCTCTTCAAGAAACACACTACGAGTCCACCCAGGACAAGGCAGAGTCCCGCTCAGATGATGATTCAGACGCCGAACCTTTTTCTGACAGTGAAGGCCTGATCTCAGTGGACGGTTCAGATAATGAGGTCGGCGGAGGGGAGGATTCTTTAGATGGACACGTCTCTGCAGAGGTAGCTCCTCCCACCAGGCCGGACAGCCCAGCCCATCACAGGAAGTCCCCACACAAAGAGTTATGTCACAGGAAAGAGGAGAGCAAGAAGAACCACCTAGAGCCGGTCGGGATCAGTCACAGCCACAGCCAGTCAGAGTCTCAACAGCGTCTGGGAGAAAACCACAGTTCCACGTCGCATCAGCCCTCAGAACCTGCCGGCACCAGCACAGCAGATCCAGACGACAACGGTCCAAAGGCCCGCCTAATGCTTCGATACCCAGATGGCCAGAGAGAACAGATAGCATTGTCTGCTAAAGCTAAACTCATGGCACTGGTGAGACACGTTCAGTCGAAGGGATTCCCAAATGAACGCTTCGAACTTGTCACCAACTTCCCCCGCCGAAGACTCGCTCACTTGGACTATGACATCACACTGCAAGAAGCAGGACTGTGTCCGCAGGAGACTGTGTTTGTGCAGGAGAGGAATTAGCCCCTCCCCTTGTAGATAAATTACACCCCCTCCTGTCCTGTCATTTGTGCCCTAGAAAGACTGAATTGACTGTGCCCTGTTAccacttgtctttttttttttttttttcttttcttttttttataataagtcCAGGATACTCAGAACATTTTGTAGTTCATAGGGACCGTCCCTTGAGCTGCATTTGTCAAcgtatttatttacaaacaacTTGGCACATCCCATCCTATCTGGGTCTAATTCTTCAAGACAGTACGTGTCCGTGAGCTCGGCTCAAATTGATATGGAAATGAAAAGGGTTTTACAGATGGTAGGGAAAACATTGTGTATCGTGTATATGCAACGTTTTTAAGGATTGAACATCAGCTCCGAAGTGGCTACGGTTCCTGTTAAAGTCATCTGAGCAGGTTGGGGTCATGTTAAACGTGGGCTCGGATGAATTTGGgatgaatgtttattatttagagGTAAACCCTCACATATCTCATCTGCAATGTGCAGGGACGGAAGAAGTAGAGTGACATTTAGCTATAGTAAGTTTCTATCTCCTTTTTTATATACTGCatcatttccacaaaaaaactgattctCAAATATAATCATTGAAACAAAAGGGA
>XM_043224570.1
CGGGATTTTTTGCACAGGCCGTTTCGCTTGAGTAAAACACGGGGTCTTTAGAAATGCTGTATGTGGGGAAGAGGGCATCATCATTACTGCCCCCTCTGTCATGCAAAGGAAAGAGACTAACGAAAGCTTCGGCTAGCTGCTATCTTGCACTTGCTTTAATATGGATCTGCgtgcaaaagaaaagaattcCGAACAGAAAGGGGGCGATCTAATGTAGACTAATTTCTTAAGAGCCACAGAGAGTGTAGGGAAGCATATGTTGGAAGCATGTAACAACAACCTAGAGATGGCCGTCACCATGTTTCTAGACGGAGGGGGCATCGCAGAGGAACCCAGCACGAGCGCCAGTTCAGCCGGGGCGTCCAGCAGCAGACACCCCCCCGTAGAAGATGATGTGCGAGCGCCCATTCCTCAGAAGCAGGACATTCTGGTGGAGCCTGAGCCCTTGTTTGGAGTACCAAAGAGGCGTAGACCAGCGCGATCGATCTTTGATGGATTTCGTGATTTTCAGACGGAAACAATGCGACAGGAGCAGGAGCTGAGAAACGGAAGTGCGATGGACAAGAAGCTGAGCACTCTAGCCGATCTGTTCCGTCCCCCCATTGAACTCATGCACAAAGGCAGCTTTGAGACGGCGAAAGACTCCGGTCAGCTTGAGAACAAATGGCTGATGATCAACATTCAGAATGTCCAGGATTTCGCCTGTCAGTGTCTAAACCGAGACGtgtggagcaatgatgctgtgAAAAACATCATCAGAGAGCACTTCATATTCTGGCAGGTGTACCATGACAGTGAGGAAGGGCAGAGGTACATTCAGTTCTACAAGCTTAACAAGTTCCCATATATATCTATCCTGGACCCTCGTACAGGACAAAAGATGGTTGAGTGGAACCAGTTAGACGTGACCTCATTCTTGGATCAGGTCACAGGCTTCCTGTCAGAGCACGGGCAGCTGGATGGGCAGTCCAGTCAACCTCCGGCCAAACGGGCTCGTTCTGAGAGTCTGATAGATGCCAGTGAGGACAGTCAGTTAGAGGCCGCCATCCGGGCCTCTCTTCAAGAAACACACTACGAGTCCACCCAGGACAAGGCAGAGTCCCGCTCAGATGATGATTCAGACGCCGAACCTTTTTCTGACAGTGAAGGCCTGATCTCAGTGGACGGTTCAGATAATGAGGTCGGCGGAGGGGAGGATTCTTTAGATGGACACGTCTCTGCAGAGGTAGCTCCTCCCACCAGGCCGGACAGCCCAGCCCATCACAGGAAGTCCCCACACAAAGAGTTATGTCACAGGAAAGAGGAGAGCAAGAAGAACCACCTAGAGCCGGTCGGGATCAGTCACAGCCACAGCCAGTCAGAGTCTCAACAGCGTCTGGGAGAAAACCACAGTTCCACGTCGCATCAGCCCTCAGAACCTGCCGGCACCAGCACAGCAGATCCAGACGACAACGGTCCAAAGGCCCGCCTAATGCTTCGATACCCAGATGGCCAGAGAGAACAGATAGCATTGTCTGCTAAAGCTAAACTCATGGCACTGGTGAGACACGTTCAGTCGAAGGGATTCCCAAATGAACGCTTCGAACTTGTCACCAACTTCCCCCGCCGAAGACTCGCTCACTTGGACTATGACATCACACTGCAAGAAGCAGGACTGTGTCCGCAGGAGACTGTGTTTGTGCAGGAGAGGAATTAGCCCCTCCCCTTGTAGATAAATTACACCCCCTCCTGTCCTGTCATTTGTGCCCTAGAAAGACTGAATTGACTGTGCCCTGTTAccacttgtctttttttttttttttttcttttcttttttttataataagtcCAGGATACTCAGAACATTTTGTAGTTCATAGGGACCGTCCCTTGAGCTGCATTTGTCAAcgtatttatttacaaacaacTTGGCACATCCCATCCTATCTGGGTCTAATTCTTCAAGACAGTACGTGTCCGTGAGCTCGGCTCAAATTGATATGGAAATGAAAAGGGTTTTACAGATGGTAGGGAAAACATTGTGTATCGTGTATATGCAACGTTTTTAAGGATTGAACATCAGCTCCGAAGTGGCTACGGTTCCTGTTAAAGTCATCTGAGCAGGTTGGGGTCATGTTAAACGTGGGCTCGGATGAATTTGGgatgaatgtttattatttagagGTAAACCCTCACATATCTCATCTGCAATGTGCAGGGACGGAAGAAGTAGAGTGACATTTAGCTATAGTAAGTTTCTATCTCCTTTTTTATATACTGCatcatttccacaaaaaaactgattctCAAATATAATCATTGAAACAAAAGGGA

Function

symbol description
ubxn7 Orthologous to human UBXN7 (UBX domain protein 7).

NR:

description
PREDICTED: UBX domain-containing protein 7

GO: NA

KEGG:

id description
K24350 UBXN7; UBX domain-containing protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224561.1 False 2189 mRNA 0.49 11 8537215 8545646
XM_043224570.1 True 2313 mRNA 0.48 11 8537215 8545516

Neighbor

gene id symbol gene type direction distance location
tfa LOC107732944,LOC107677673 coding downstream 8472 8523486 ~ 8528743 (-)
eif4g1a LOC107563298,LOC107732943,LOC107677601 coding downstream 17636 8499265 ~ 8519579 (-)
fam131a fam131a,LOC107677593,LOC107700514,LOC107732946,LOC107710547,LOC107563308,LOC106528322 coding downstream 40570 8487110 ~ 8496645 (-)
thpo thpo,LOC107553247 coding downstream 100933 8430547 ~ 8436282 (-)
cdc20 cdc20,LOC107732200,LOC107553255,LOC107563294,LOC107700550,LOC107710546,LOC107677877 coding downstream 150957 8382987 ~ 8386258 (-)
ppp1r7 ppp1r7,LOC107700558,LOC107710611,LOC107677693,LOC107732935 coding upstream 2244 8547890 ~ 8552844 (-)
gk5 gk5,LOC107710612,LOC107700559 coding upstream 7629 8553275 ~ 8565815 (-)
xrn1 xrn1,LOC107710613,LOC107732934,LOC107553240,LOC107563287 coding upstream 20735 8566381 ~ 8585034 (-)
LOC122358258 NA coding upstream 40576 8586222 ~ 8589901 (-)
grk7a grk7a,LOC107553262,LOC107677726,LOC107732950,LOC107710616,LOC107563306 coding upstream 56896 8602542 ~ 8607495 (-)
G10194 NA non-coding downstream 466862 8070154 ~ 8070353 (-)
G10185 NA non-coding downstream 602590 7934401 ~ 7934625 (-)
LOC122328801 NA non-coding downstream 745605 7788737 ~ 7791610 (-)
G10165 NA non-coding downstream 1005150 7526339 ~ 7532065 (-)
G10029 rpl5,LOC107568084,LOC107694375,LOC107743362,LOC107716952 non-coding downstream 1330813 7204484 ~ 7206402 (-)
G10345 NA non-coding upstream 84760 8630406 ~ 8630606 (-)
G10389 NA non-coding upstream 209203 8754849 ~ 8755145 (-)
G10400 NA non-coding upstream 252936 8798582 ~ 8798986 (-)
G10432 NA non-coding upstream 383844 8929490 ~ 8930083 (-)
G10438 NA non-coding upstream 397453 8943099 ~ 8943593 (-)
zfyve9a LOC107700554,LOC107563295,LOC107677579,LOC107553256,LOC107732202 other downstream 109311 8403327 ~ 8427904 (-)
G10213 NA other downstream 429427 8106856 ~ 8107788 (-)
G10196 NA other downstream 465381 8070776 ~ 8071834 (-)
G10178 NA other downstream 752061 7784468 ~ 7785154 (-)
G10170 kdm4ab,LOC107564389,LOC107700543,LOC107551714,LOC107684932,LOC107743373 other downstream 1043371 7492206 ~ 7493844 (-)
abca4b abca4,abca4b,LOC107564534,LOC107680047,LOC107745690 other upstream 636410 9182056 ~ 9210041 (-)
plppr5a plppr5,plppr5a,LOC107722655,LOC107693754,LOC107677753,LOC107589876,LOC108441579,LOC107718169 other upstream 945917 9491563 ~ 9519781 (-)
si:ch211-267e7.3 si:ch211-267e7.3,LOC107722581,LOC107594654,LOC107718186,LOC107589917,LOC107677774,LOC107693699 other upstream 1060677 9606323 ~ 9618473 (-)
hfm1 hfm1,LOC107722645,LOC107586144 other upstream 1534536 10080182 ~ 10095857 (-)
pkn2a pkn2,LOC107693716,LOC107585639,LOC107722607,LOC107718113,LOC107691687 other upstream 1574327 10119973 ~ 10139585 (-)

Expression


Co-expression Network