stk25b (stk25b,LOC107693719,LOC107585675,LOC107722570,LOC107589848,LOC108432500,LOC108278137)


Basic Information

Item Value
gene id stk25b
gene name stk25b,LOC107693719,LOC107585675,LOC107722570,LOC107589848,LOC108432500,LOC108278137
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10055965 ~ 10061716 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224595.1
GCTCCTATTATTTTGTTCTCTCGCAAGCAATAAATGAAGAGCCGCCCGAACGCGAGCGGATCAACATAAAACAATTAGACACGGAAAGCGGCCAGCTCGTACGCAGATGCTTTCATACATGGAGTCACACGACACCTAACCGTGATTCTCGCCAGGCTGCGGGGTCCGCCATCAGGGGATTGGAGGCCGAAAACACGGCAGACGAACAGGACATGCAGAggtgtttttgtatgtaaaagCTAGCTAGCTAAGCAGGGGATCGGAGGAGGAAGAGCAAACCGTTGAAGAGtttttccagcacccctccttTGGCAGAAAGGGCCACATCTGCTCTCGTCGACAGCGACCTGCCTTCAGGATGGCGCACCTCCGCGACATGCAGAACCAGAATTCCCGGCTAGATCCGGAGGAGTATTTCACAAAACAGGAGCGCATTGGGAAGGGGTCTTTTGGTGAGGTCTACAAGGGTATCAACAATCGCACTAAAGAGGTGGTGGCCATCAAGATCATTGACCTGGAGGAGGCGGAAGATGAGATCGAGGACATTCAGCAGGAGATCACGGTGCTCAGCCAGTGTGACAGCCCCTATGTCACCAAATACTATGGCTCATATCTGAAGGGAACAAAGCTGTGGATCATCATGGAGTATTTAGGCGGCGGCTCTGCTTTAGATCTTTTGAAACCAGGACCGCTGGAGGAGACGTACATTGCCACTATATTGAGGGAGATTCTGAAGGGACTGGAATACTTGCATTCGGAGAGGAAGATTCACCGCGATATCAAAGCTGCCAACGTGCTGCTGTCTGAGCAGGGAGATGTGAAGCTGGCAGACTTCGGGGTGGCGGGACAGCTCACAGACACCCAGATCAAGAGAAACACTTTTGTGGGAACTCCTTTCTGGATGGCTCCGGAGGTCATCAAACAGTCCGCGTACGATTTTAAGGCAGACATTTGGTCCTTGGGAATTACAGCTATTGAACTGGCGAAGGGGGAACCCCCGAATTCTGACCTGCATCCGATGAGAGTGCTGTTTCTCATTCCCAAGAACACTCCCCCGACGCTGGAGGGCTCCTACAGCAAACCCTTCAAAGAGTTTGTGGAGGCATGCCTCAATAAAGACCCTCGCTTCCGGCCCACCGCCAAGGAGTTACTGAAGCACAAATTCATCACACGCTACACCAAGAAAACCTCCTATCTGACAGAGCTGATTGACCGATACCGCCGCTGGAAGTCTGAAGGCCACGGAGATGAATCCAGCTCTGATGATTCTGATATGGATGGAGATGGTGATGACAGAGACCAGTGTCCCGTGTGGACGTTCCCCACAGTCCGGCCCAGCTCCATGAACAAGCTCCAGAAGGgctacacaaacacagactcagAGGCAGCAGAGACGGTAAAGAGGCAGCCCAAGTCACAATGTCTGTCAGCGCTGGTCTCTCCCATCTTCAGAGAGCtgaaggagaagaggagggcATGTGGAGGAGGAATGGGTGCCATAGAGGAGCTGGAGAATGCCTTTAACCTGGCAGAAGAGTCCTGCCCTGGCATCTCTGACCTGCTGGTCACACACATGATGGAGAGAGTGTGCAgGTTTGCTCTGAATGGCAACACCACGCCATCATCACGGTGAAGCCCCgcctctgctgctgctgctcgcCCGGCCCccaaaatcatcatcatcaccatcttcatcttcatcgcCCAGTCAGGACCACAATACGACTGCCCATCGTTCACCCCGTCTTACCCCCAGAGATCTTTTAATTAgttatgattaaatatttttacagttttctttatagAATGGAAAGTATTTAAGAGAAAAAGCCATGTCATTGAGCGAACTGTGTTTACCTGTTAGATCCAAATCctattataaagtgtttatgGAAA

Function

symbol description
stk25b Predicted to enable ATP binding activity and protein kinase activity. Acts upstream of or within blood vessel morphogenesis and heart development. Is expressed in blastomere; brain; head; and post-vent region. Orthologous to human STK25 (serine/threonine kinase 25).

NR:

description
serine/threonine-protein kinase 25

GO:

id name namespace
GO:0006915 apoptotic process biological_process
GO:0007507 heart development biological_process
GO:0048514 blood vessel morphogenesis biological_process
GO:0006950 response to stress biological_process
GO:0006468 protein phosphorylation biological_process
GO:0045595 regulation of cell differentiation biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004702 obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity molecular_function

KEGG:

id description
K08838 STK24_25_MST4; serine/threonine-protein kinase 24/25/MST4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224595.1 True 1896 mRNA 0.51 11 10055965 10061716

Neighbor

gene id symbol gene type direction distance location
thap4 thap4,LOC107586721,LOC107693706,LOC107589912,LOC107691505 coding upstream 6859 10046848 ~ 10049106 (+)
agxtb agxtb,LOC107722583,LOC107718120,LOC107693722,LOC107691560,LOC107585700,LOC105899541,LOC103036651,LOC108432502 coding upstream 15112 10036539 ~ 10040853 (+)
myo7bb LOC107693708,LOC107722614,LOC107564725,LOC107589856,LOC107691586 coding upstream 94490 9942861 ~ 9961475 (+)
sap130b sap130,sap130b,LOC107693727,LOC107691745,LOC107589892,LOC107722618 coding upstream 115218 9928426 ~ 9940747 (+)
mllt1b LOC107722626,LOC107718125,LOC107564713,LOC107691596,LOC107589857 coding upstream 128721 9917331 ~ 9927244 (+)
LOC122324805 LOC107695158,LOC107722506,LOC107586159,LOC107691708 coding downstream 13441 10075157 ~ 10077334 (+)
cldn18 LOC107722530,LOC107693705,LOC107718157,LOC107586152,LOC107589887 coding downstream 16684 10078400 ~ 10079945 (+)
znf644a LOC107722621,LOC107693692,LOC107589847,LOC107586139 coding downstream 34693 10096409 ~ 10107424 (+)
gtf2b gtf2b,LOC107693714,LOC107585659,LOC107718116 coding downstream 52857 10114573 ~ 10119939 (+)
fam110b fam110b,LOC107585622,LOC107722620,LOC107693712,LOC107691438,LOC107589841,LOC107718111 coding downstream 106524 10168240 ~ 10198276 (+)
G10753 NA non-coding upstream 40143 10014559 ~ 10015822 (+)
G10752 NA non-coding upstream 41599 10011937 ~ 10014366 (+)
G10738 NA non-coding upstream 45219 9989143 ~ 10010746 (+)
G10749 NA non-coding upstream 62570 9992784 ~ 9993395 (+)
G10674 kifap3b,LOC107693735,LOC107564707,LOC107722509,LOC107718166 non-coding upstream 229745 9825615 ~ 9826220 (+)
G10838 NA non-coding downstream 79626 10141342 ~ 10141971 (+)
G10883 NA non-coding downstream 147847 10209563 ~ 10209851 (+)
G10902 NA non-coding downstream 329953 10391669 ~ 10391956 (+)
G10903 NA non-coding downstream 330977 10392693 ~ 10393150 (+)
G10901 NA non-coding downstream 360221 10421937 ~ 10539990 (+)
znf414 LOC107722538,LOC107564712,LOC107693731,LOC107691619,LOC107718126 other upstream 139104 9911628 ~ 9916861 (+)
arpc5a arpc5a,arpc5,LOC107722639,LOC107693740,LOC107564704,LOC107677751,LOC107718183 other upstream 304753 9746570 ~ 9751212 (+)
olfm3b olfm3b,LOC107700521,LOC107710604,LOC107745696,LOC107680049 other upstream 884050 9162611 ~ 9171915 (+)
G10212 NA other upstream 1948188 8106865 ~ 8107777 (+)
G10108 NA other upstream 2473580 7504622 ~ 7582385 (+)
selenof selenof,sep15,LOC107693704,LOC106598901 other downstream 96816 10158532 ~ 10161809 (+)
lyrm4 lyrm4,LOC107718092,LOC107688446,LOC107722638,LOC107689406,LOC107688520 other downstream 601013 10662729 ~ 10665110 (+)
G10979 LOC107722568,LOC107585289,LOC107688450,LOC107718087,LOC107689412 other downstream 649414 10711130 ~ 10718194 (+)
LOC122359491 tesk2,si:dkeyp-75h12.2,LOC107585988,LOC107679327,LOC107602527,LOC107728975,LOC107714850,LOC107674209,LOC107562290,LOC107668671,LOC107588168,LOC107691921,LOC107753974 other downstream 1058138 11119854 ~ 11135991 (+)
kcnh2a kcnh2a,LOC107718079,LOC107589806,LOC107722642,LOC107676096,LOC107586123 other downstream 1168044 11229760 ~ 11264234 (+)

Expression


Co-expression Network