G517


Basic Information

Item Value
gene id G517
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 1391396 ~ 1392384 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU615
CGAATTACGATGTTGCTCAATATTGCTTGTGAAATTACTAAATTCTTGCGAATTTTAAGCCACACCCTTCCTAAAAACAAACTGACACAATGCTTGTGAAACGGTGCTGATTGTTTTCATCACACTAAAGACTACAACATAGGTTACATCTGTGACAAATGACCAGCAGGGTGCCGTTCCCTAGAGTTATCTCAGTCAGACACCATGGAGTCGTGCTCTGGGTGGCTCTTCAGTTGGTAGCCTATGGCTTTTCCATCTGCTCTGATTTCCAGATAGGACCTTCACTAATGTGACACCACTCAGACCAGGGTAGGGCTGCACAAGCCATTCGTAAGTTCTTAAATTGGAAGTCCACACTAGTAACTACTAGCAAGTTTGTTACTAACTCTGTACTTCATTCGATTGTACCATTTGTTCTTAAAGGGTTAGTTTACCCAAAAATGATGTCATTAATTACTCAGCCTCATGTCGTTCTAAACTCGTAAGACTTTCCGAAGACCGCTCATCTTCGAAACACAAATAAAGATCTTTTCGATGAAATCTAAGAGCTTTCTGTCCCTCCATTGACAGCCACATAACACTTTGAAGCTTCAAAAAGTTCATAAAGAGATTGTAAAACAAATCCATATGAACTGAGCGGTTTAGTCCAAATTTTCTGAAGAGACACAATCGCTTTATATAATCAACAGATTGAATTTAGGCTTTTATTGACATATAAACATTCATCAATTCACACATCAGTTATGGTAAACGGAAACTCAAGCATGTTTTCTTGACGTGCGAGAACCAGTGAGGTTCATTCTCATGTTACAAAGCACGTTTGAGCTTCCGCAAGAGGTTTGCTCTCACGTGTCAATCAGGTTTGGATCAGCTTCTGTTTATGTTCGCTGATCAATGTTTATATGTGAATAAAAGCCTAAAGTAAATCTGTTCATCATATAAGCGATCATGTCTCTTCAGAAAATTTGGACTAAACCACTCAATTCATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU615 True 989 lncRNA 0.44 1 1391396 1392384

Neighbor

gene id symbol gene type direction distance location
CI01000000_01347674_01352321 NA coding upstream 38168 1347674 ~ 1353228 (+)
CI01000000_01209256_01229839 NA coding upstream 161037 1208489 ~ 1230359 (+)
CI01000000_01196208_01208022 CLK4, CLK4A coding upstream 183039 1196208 ~ 1208357 (+)
CI01000000_01176488_01180221 4EB3L, 4EBP, EIF4EBP3, EIF4EBP3L coding upstream 211127 1176450 ~ 1180269 (+)
CI01000000_01149697_01163047 RUFY1 coding upstream 227416 1149697 ~ 1163980 (+)
CI01000000_01405606_01410241 NIPSNAP3A coding downstream 13222 1405606 ~ 1410503 (+)
CI01000000_01459294_01485147 SLC44A1 coding downstream 66910 1459294 ~ 1485311 (+)
CI01000000_01511690_01517631 IKBKAP coding downstream 119306 1511690 ~ 1517719 (+)
CI01000000_01680507_01690297 CPLX2, CPLX1, CPLX1.L coding downstream 288123 1680507 ~ 1691194 (+)
CI01000000_01848610_01851296 NA coding downstream 455159 1847543 ~ 1851898 (+)
G516 NA non-coding upstream 738 1390435 ~ 1390658 (+)
G515 NA non-coding upstream 1806 1389309 ~ 1389590 (+)
G514 NA non-coding upstream 6859 1384326 ~ 1384537 (+)
G513 NA non-coding upstream 7229 1383904 ~ 1384167 (+)
G512 NA non-coding upstream 8075 1383108 ~ 1383321 (+)
G503 NA non-coding downstream 1958 1394342 ~ 1394620 (+)
G520 NA non-coding downstream 10769 1403153 ~ 1404134 (+)
G428 NA non-coding downstream 94840 1487224 ~ 1490347 (+)
G576 NA non-coding downstream 314386 1706770 ~ 1706985 (+)
G350 NA other upstream 714459 671842 ~ 676937 (+)
G252 NA other upstream 884324 503209 ~ 507072 (+)
G435 NA other downstream 32737 1425121 ~ 1432854 (+)
G579 NA other downstream 423069 1767917 ~ 1908808 (+)
G2774 NA other downstream 3061394 4453778 ~ 4454232 (+)
G2850 NA other downstream 3333602 4725986 ~ 4726482 (+)
G6811 NA other downstream 8812447 10204831 ~ 10321679 (+)

Expression


Co-expression Network