frrs1a (LOC107693701,LOC107722512,LOC107594678)


Basic Information

Item Value
gene id frrs1a
gene name LOC107693701,LOC107722512,LOC107594678
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 9570591 ~ 9577749 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224923.1
CCTGAGCAGACAAGGTTTTGACAAGCGTATCATATGCAGATTAGGATAGCATTGCCTCTGCTGGAAATGTGGAATCTACAAACTGCTCTGGCAATTCTTGGGACTTTGTGTTTGACCTCTATAAGCGGATACAAAAATGGAAAGGTGGAGAAATCTTGTGAGAGCATGATGCCAGAACATCACAGCCAACCCAACACTACTGCCAGCCCATACACACTGACTGCGAACGCCAGTAAGTTCAGTCCAGGGGACGATATAAGAGTCACTCTTTTTGGAAGTGAGCACTTTAAGGGCTTTCTGATTCAGGCCCGAGATGCCACGAACCCTGATGCACCAGCTATTGGCTCGTTCACGCTGGTAGATCCTGACATTTCTCAGCGTTTGACATGCAACAGAATAGAGGGTTCTGCTGTTAGTCACACCAGTAATGCCAAAAAGAGTGAAATTCGGGTGATTTGGAAAGCTCCGTCCAATGCTCCTCCCGCTGTACAGTTTTTTGCCACAGTTCTTGCTCACTACAATATTTTCTGGCACAAGCTTCCTGGTCCTGTCATATCTCACATCTCAATGTCTCCCGCTCCACCTCAACCAACCACCATCACGTCTACAAACTCTGCAAGCACTTCTATTCTGCCTCAGCCATCCACCTCAGAGGGATGCGGCAAGTGGAAGTCTTGTCTCACTGACCCTGTCAGCTGCAACCCTTCGGTGCACACAAACTGCTTCTTCCTTTCTTATTCTACTTTGGGCCAGACAGTTTCGTTCGAGCTCAGCGGCCCTTCACAGGGATACGTATCTTTTGCTCTGTCCAAGGATCAGTGGATGGGAGATGACGATGCGTACCTGTGCATAAATGACGAGGGTCGTGTAAGTGTGGAGGCTGCACACACAACAGGCCGGACGTATCCAGAGGTATCATCCAAGTCTGTGCTGACTGATGTAGGCTGGAGAGTTTCCGATGGGGTCATTCAGTGCAAGTTCTCTAGGTCCATCTACGCTCCTCAGGATCCGGTCCGGTTCAGCCTTAACAACAGTTACTACCTGTTTGTAGCGCACGGGACTGCAGAATATGGTATGATCCACAGACACACGCGGCAGCCGCTGATATCATCCCATTCTCAGATCATTACCGGCCCTCCTGAGATACTGACGGGATCTCGATCTCCACTGCTCATGAAATATCATGGAGCTCTAATGCTGATGGCCTGGATGCTAGCAGGAAGCACTGGAAAATTAATGGCTGCCTATTTTAAACCTGACTGGCCAGAACAGACATTGTTTGGGCAAAAGATATGGTTTCAGgtgCATCGCATGTTGATGTCTCTTACAGTTTTGCTGACCGCTGTAGGCTTTGTATTTCCTTTCGTCTACAGAGGAAAGTGGAGCACAAGAGCTGGTGCTCATCCATACCTCGGCTGCACTGTTATGATTCTCGCTTTTTGTCAGCCTGTAATGGCAGCATTCAGACCAGCTCCAGATTCCTCACGgCGATGGATATTTAACTGGATGCACTGGGGTGCTGGAAATGCTGCAGAAATTATAGCAGTGTTGTCCATGTTTTTTGGAATGAGGCAACAGTCTCTATTGCTGCCTTATCCTTGGACCACAGGGGTTCTCTCTGCTTTTGTGGTTTGGACCATTGTGTTAAAGCTGGTGTTAAAACTTCATAAGCATGGTATTGTTAGAAAAGGGAGTGGAAAGGAAGATGAAATTCCAGTTCTCTCAAACTTTTCAGAGGATGTAAATTGGGATACTAAGTTTAGAGTGGCTGTCCTTGCTGTTTTAGTGCTCGGAAACTCAGCATTCTGTATCTCACTACTCGCCTCCATAGGGGACATATAACCAACATATGAATCATATGGAACTACAGAAATTGGAACGAAGACCTAATTATTTATAGAGCAAGACAAGTCATCAtcagtttcattttattcaagGTTTGAACAGTATTTTGCattgaaaacatcctgcaaggAAGAAACGTATCTATTAAGACATTTCAAACATgaatattatgaattaaaattcacacatcttttaaattattttcacagAAGAATAAATGTCAACATTATATCCAGACAATCaaagcataaaacatttaaaaggctCACAATGTAATTGTACAGAAACCAGCTACTTTTCTTGTAACACCTCTGGAAGCTACATCCACAATATACTCTTGTTAGACATTCCAAGCGGCCTTCTCTTGTCTTAAATTGCACTTTTGTTCAGATTAAATCaaagataaatgtatttttatttgcttctgCTCTTCACTGTATGGTTAATATAAATtagaataataca
>XM_043224931.1
CCTGAGCAGACAAGGTTTTGACAAGCGTATCATATGCAGATTAGGATAGCATTGCCTCTGCTGGAAATGTGGAATCTACAAACTGCTCTGGCAATTCTTGGGACTTTGTGTTTGACCTCTATAAGCGGATACAAAAATGGAAAGGTGGAGAAATCTTGTGAGAGCATGATGCCAGAACATCACAGCCAACCCAACACTACTGCCAGCCCATACACACTGACTGCGAACGCCAGTAAGTTCAGTCCAGGGGACGATATAAGAGTCACTCTTTTTGGAAGTGAGCACTTTAAGGGCTTTCTGATTCAGGCCCGAGATGCCACGAACCCTGATGCACCAGCTATTGGCTCGTTCACGCTGGTAGATCCTGACATTTCTCAGCGTTTGACATGCAACAGAATAGAGGGTTCTGCTGTTAGTCACACCAGTAATGCCAAAAAGAGTGAAATTCGGGTGATTTGGAAAGCTCCGTCCAATGCTCCTCCCGCTGTACAGTTTTTTGCCACAGTTCTTGCTCACTACAATATTTTCTGGCACAAGCTTCCTGGTCCTGTCATATCTCACATCTCAATGTCTCCCGCTCCACCTCAACCAACCACCATCACGTCTACAAACTCTGCAAGCACTTCTATTCTGCCTCAGCCATCCACCTCAGAGGGATGCGGCAAGTGGAAGTCTTGTCTCACTGACCCTGTCAGCTGCAACCCTTCGGTGCACACAAACTGCTTCTTCCTTTCTTATTCTACTTTGGGCCAGACAGTTTCGTTCGAGCTCAGCGGCCCTTCACAGGGATACGTATCTTTTGCTCTGTCCAAGGATCAGTGGATGGGAGATGACGATGCGTACCTGTGCATAAATGACGAGGGTCGTGTAAGTGTGGAGGCTGCACACACAACAGGCCGGACGTATCCAGAGGTATCATCCAAGTCTGTGCTGACTGATGTAGGCTGGAGAGTTTCCGATGGGGTCATTCAGTGCAAGTTCTCTAGGTCCATCTACGCTCCTCAGGATCCGGTCCGGTTCAGCCTTAACAACAGTTACTACCTGTTTGTAGCGCACGGGACTGCAGAATATGGTATGATCCACAGACACACGCGGCAGCCGCTGATATCATCCCATTCTCAGATCATTACCGGCCCTCCTGAGATACTGACGGGATCTCGATCTCCACTGCTCATGAAATATCATGGAGCTCTAATGCTGATGGCCTGGATGCTAGCAGGAAGCACTGGAAAATTAATGGCTGCCTATTTTAAACCTGACTGGCCAGAACAGACATTGTTTGGGCAAAAGATATGGTTTCAGgtgCATCGCATGTTGATGTCTCTTACAGTTTTGCTGACCGCTGTAGGCTTTGTATTTCCTTTCGTCTACAGAGGAAAGTGGAGCACACGGTTCTGTGCAGAGAGCTGGTGCTCATCCATACCTCGGCTGCACTGTTATGATTCTCGCTTTTTGTCAGCCTGTAATGGCAGCATTCAGACCAGCTCCAGATTCCTCACGgCGATGGATATTTAACTGGATGCACTGGGGTGCTGGAAATGCTGCAGAAATTATAGCAGTGTTGTCCATGTTTTTTGGAATGAGGCAACAGTCTCTATTGCTGCCTTATCCTTGGACCACAGGGGTTCTCTCTGCTTTTGTGGTTTGGACCATTGTGTTAAAGCTGGTGTTAAAACTTCATAAGCATGGTATTGTTA

Function

NR:

description
putative ferric-chelate reductase 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224923.1 True 2310 mRNA 0.44 16 9570591 9577749
XM_043224931.1 False 1697 mRNA 0.48 14 9572293 9577749

Neighbor

gene id symbol gene type direction distance location
dpydb dpyd,dpydb,LOC107677757,LOC107718148 coding downstream 123809 9346029 ~ 9446782 (-)
cnn3b cnn3b,cnn3,LOC107680046,LOC107730489,LOC107570492 coding downstream 299494 9263194 ~ 9271097 (-)
f3b f3,LOC107730491,LOC107564531,LOC107680051 coding downstream 319622 9248600 ~ 9250969 (-)
arhgap29b arhgap29,LOC107745695,LOC107564532,LOC107680050 coding downstream 331642 9212459 ~ 9238949 (-)
amy2a amy2a,LOC107700520,LOC103353956 coding downstream 511489 9055723 ~ 9059102 (-)
dusp12 dusp12,LOC107722526,LOC107589915,LOC107677752,LOC107718184,LOC107693747 coding upstream 71059 9648808 ~ 9651247 (-)
tpra tpra,LOC107693743,LOC107722541,LOC107718142,LOC107589873,LOC107677758 coding upstream 104224 9681973 ~ 9702207 (-)
pdca pdca,LOC107594646,LOC107722648,LOC107693745,LOC107589870,LOC107677764 coding upstream 133044 9710793 ~ 9713560 (-)
ptgs2a ptgs2a,LOC107594645,LOC107722606,LOC107693741,LOC107677761,LOC107718138,LOC107589869 coding upstream 148898 9726647 ~ 9729940 (-)
rnf2 rnf2,LOC107718134,LOC107564705,LOC107693737,LOC107677769 coding upstream 198318 9776067 ~ 9780623 (-)
G10562 NA non-coding downstream 109507 9457163 ~ 9461084 (-)
G10569 NA non-coding downstream 119665 9450560 ~ 9450926 (-)
G10518 ptbp2,ptbp2b,LOC107570490,LOC107594658 non-coding downstream 239348 9327802 ~ 9331243 (-)
G10438 NA non-coding downstream 626998 8943099 ~ 8943593 (-)
G10432 NA non-coding downstream 640508 8929490 ~ 8930083 (-)
G10621 NA non-coding upstream 27889 9605638 ~ 9606195 (-)
G10708 NA non-coding upstream 170638 9748387 ~ 9748740 (-)
G10773 NA non-coding upstream 348356 9926105 ~ 9927837 (-)
G10812 NA non-coding upstream 469069 10046818 ~ 10047373 (-)
G10869 selenof,sep15,LOC107693704,LOC107586130 non-coding upstream 580829 10158578 ~ 10160064 (-)
plppr5a plppr5,plppr5a,LOC107722655,LOC107693754,LOC107677753,LOC107589876,LOC108441579,LOC107718169 other downstream 50810 9491563 ~ 9519781 (-)
abca4b abca4,abca4b,LOC107564534,LOC107680047,LOC107745690 other downstream 360550 9182056 ~ 9210041 (-)
zfyve9a LOC107700554,LOC107563295,LOC107677579,LOC107553256,LOC107732202 other downstream 1142687 8403327 ~ 8427904 (-)
G10213 NA other downstream 1462803 8106856 ~ 8107788 (-)
G10196 NA other downstream 1498757 8070776 ~ 8071834 (-)
si:ch211-267e7.3 si:ch211-267e7.3,LOC107722581,LOC107594654,LOC107718186,LOC107589917,LOC107677774,LOC107693699 other upstream 28574 9606323 ~ 9618473 (-)
hfm1 hfm1,LOC107722645,LOC107586144 other upstream 502433 10080182 ~ 10095857 (-)
pkn2a pkn2,LOC107693716,LOC107585639,LOC107722607,LOC107718113,LOC107691687 other upstream 542224 10119973 ~ 10139585 (-)
lmo4 LOC107722609,LOC107693715,LOC107691760,LOC107589910 other upstream 563186 10140935 ~ 10143709 (-)
ca8 ca8,LOC107693711,LOC107585586,LOC107691405,LOC107589840,LOC107722503,LOC102778484 other upstream 736284 10314033 ~ 10320403 (-)

Expression


Co-expression Network