LOC122354760


Basic Information

Item Value
gene id LOC122354760
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 23625007 ~ 23630373 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043252978.1
GTGTTCACATTTATCATTTCGAAGTTCCTTTTCTTTGTACTTGTCCGCATTGATTGATCAATGGTGTGTCTTGATAATTGATCTCcatttgctttgtgtgtgtgtgtgtgtgtgtgtgtgtatgtagtgTCATAtaatttttccttgtttttcatATTACATCGTATTACTTCATATTACATCTCTTGCCTCTTGCTTTCAAAATATAGAGGAAATATAGCAAGAAAGCGTAGTCATCTTTGCactattgtatataatataatataatataatatgctgaGGCTCCTCtatctgtttttgaaaatttcagttgtatttatttaataatttttaaatggcataaataaaatggcatttattgttAACATGGCACCATAATCCTAACAACAAGgacattactattttatttctttatttcaaattgttTCTCAATCAAAGAAACCCATTACAGCctaaatgaaacactttttattggtaatatgcattgctaagaacttcgcttgaacaactttaaaggtaattttctcattttgagtttttttcgaAACATTGTATCTCAGACAAAAAATTTAGAAATtttgaaattacatataaagcCCTAAATGACTTAGCTCTTCAgtacttgagcaagctcttattGAATTTTAGTCCAGAGGAGAattggccccaactgagcctgtttttttttccttcattctgTTACAGATGGGGTTTTAATTTCTTGCACCTCAGGCTTGCTTAGTAGGAGACACTTATTTACTAGCGTTTATCGTTGATTGGATTACAgagtctctgcatttaataaataaatgaatacattactATTTATCACCatctatttagcacccaaactctccctaacactgttcgagaggcagacacactctgtcagtttaaatccagattaaagacccatctctttaacctggcttacacacaacacactaatacacttctattattcaaatctgttaaaggattgtttgGCTGCAGTAATTAGATCAACTGAAACCGAGAATACACCCCATAACATGTACTTGTTATATCGAAAGAAGAACAGCATCTACGTTAATATTAgtcagtttctttcttattgtCTAAATATACGAGACCTAAAGTGtctcatttttttatgtgttcatgCACGTAGTGTAACGGCTGGCTCGTAGGCCACGACAAAGGAGGAGTCAACACGTTGGATaacattcaaaaaaagaaaaaacatttataaaagtaaGGAAAATTAGAGtaaaagaagacaaaacaacagaagGATGGATAACAAGCGCCTCTGAAGGGAGCACAACTGAAGGGAGCAGTTTAAATCTTCCGGAGGAAGCTCCTAactcttctgtgtttttttacattcaaaactTTGGTGCCCATTTACGTCTAtcatatgactgacagacttcAATGGTTTAAgttctaatgaagaaacaaaaggTACATACATCTCTTTCCATTCCACTTATATGTTACTGgttcattaacatttaacatagGATTACCATACTTAGCAGATATGAAAAAAGTATTAGTATCTATTGAGTTGAGGATATCTATGGtctaaaaagtaactaataactaaactaaaagtaCTAATTCTATTGTTTTCTTAAATACCAATTACTATTGGAATAAGCACTAGTATCTAATGAATAACTTCTGCAACTACAAAAGGGCTTAATAAAAATCAGCCCTAAGAATCGTATAAATAAGCAGCTAAACAATAAGCATGAGTAGCTAAAGAATAAGTACTagtaatgaaaaatatactATCATCTAAAAAATAAGTACTAGTAGCATGAAAATAGATATTATAGAACttatagatatataatttttttaagcagtttagCCAGAATGTCTGTGAAGCTGTGAGGTTGTCtttgaaaataaagcaaaatgaaataaaattgtaattcttCTTGAGAAGACTGACACCTAGAGGGCATTATTATTTGAAGCTATTGCACACGTCTCTCAAACACATAACCAGGAAGTACTTAACCAGGAAACAAAAAACCTAAGCACTGACAGACCGCTGTATGTGCCTGTGTATACTTGCAGAAATGGCAGAAGGCAGTATTTCATGGGCTCAGGATCAGTTCAGCTGTCCGATCTGTCTGGATCTACTGAAAGATCCAGTGACCATCCCCTGTGGACACAGCTACTGCATGAACTGTATCACAGACTTCTGGAATCAAGATGATCAGAAGGGAGTCTACAGCTGCCCTGAGTGCCGACAGACCTTCAGTCCAAGACCTGCTTTAAACAAGAATGTGATGTTGGCTGAAATGGTGGAGAAACTGAAGAAGATCAAAGTCCAAACAGCTTGCCCTGATCCAAGTTATGCTGGACCTGGAGACGTAGAGTGTAACGTCTGCACAGGGAGAAAATATAAAGCTGTCAAGTCCTGTTTGTTGTGCCTGAACTCTTACTGTCAAATTCACCTCAAACAACACAACAGTTTCTTTAAAGATAAGAGGCACAATCTGATAAATGCCACTGGACGACTCGAGGAGAGGATCTGCCCTCAACATGACCGACTGCTGGAGATTTACTGTCGTACTGACCAacaatgtgtttgtttgctgtgtACGATAAACGAACATACAAATCATGACACAGTTTCAGCTAAAGCAGAGAGGACTGAGAAACAGAGACAACTGTTAGGCATTCAAAGAAATCTCCAGAAGAGAATccacaaaagagagaaaaagattcAGGAGCTGAAAGAGGCTGTGAAGTCGCATAAGCGCTCTGCACAGGCGGCAGTGGAGGACAGTGAGAGGATCTTCAATGAACTGATCCGCTCTATTAGGAGAAGCTACTCTGAGGTGACAAAGGTGATCAGAGATCAAGAAAAGGCTGAAGTGAGTCGAGCTGAAGGACTCTTGAAGCAACTGGAACTGGAGATTGATGATCTGAAGAAGAGAGACACCGAGCTAAATCGGCTTTCACACACAGATGATCACATCCATTTTCTACAGAGTTTTCAGTCTCTTTCTGTTGTTCCCGAATCCACAAAAAACATCAATGTCAGTTCTCTTCTCTCTTATGATGATGTTGGTAAATCTGTCTCTATGCTAAGAGAGAAATTTGAGGACATCTTCAAAGAGGAGATAAACAATATATCTGACAGAgTGAAATACATAGATATTGTTGCATCATCAGAACTCAAGACCTTAGATGATTTCCTGCAATATTCCCAGCAGCTCACCCTGGATCCGAACACTGCACATAAATATCTCAGTCTTTCTGAAGGCAACAGAGCAGCTACATTCATTGGGGCTGACCAGCGGTATCCTGATCATCCGGACAGATTTCATGGTTTTtctcaggtgttgtgtagagagagtgtgtgtggacgctgttactgggaggtgGAGTGGAGCGGGAGGGTTGGTGTGGGAATATCAGTGTCGTATAAAAGCATCGGCAGGAAAGGAGAGGGTGATGATTGTGCATTCGGATTTAATGATCATTCTTGGAGATTGTCATGCTCTGACTCCAGTTATGCATTCAGACACGATCAGAAAGCAGTTAATCTCCCTGTGTTCCCCAGCTCCTCTAGaataggagtgtatgtggatcaCAGAGCAGGCATTCTGTCtttctacagcgtctctgacacaatgaCCCTCATCCACagagtccagaccacattcactcagccGCTCTATCCGGGGTTTGCCATCAATTTAGGATCAACAGTGAAGCTGTCATCTTTAAAATTCTATGAATAGTGGCATATTAaacttcataataaaaataaatgggtATGGTTATCACATTTTTCTCCCATCTTATAATTATCTGGAATGGAACTGCacaaacagtattattattttgggggAAACTAATTGATAAATTGTATAGGTATGGGTGTCCTGGTTAACTTGCTGCTAGTCTTCACAAAGATACTTCTCTGAAGAGTTCTGGTAGTCTCTGAACTcttaatttttaagcatttgcaTTTAACTTGGATGTCTTATGAAATTTGCTCTAAAATAAACTACTACTTGCATCAGACCTTGACAGTATTTTACAAAATGCTTAAGTAAAATAGattcttgtttgttttaatattaaggacattgattttataaatgtgttcaaCTTTTAGCACCAAAACATTAAAGCAGTGGTTTTAGTTGGTCAAAGGTGCAGTGGTTTTAGACTCAAAATAGCAACGCTCCATGAACAGTGCACCTGAACACACTTAGTTTTCAGACATTATTCAGACCAGGACCCTTTTCAGACCTCTCAGGAAGATATCGTTGTGTTTGGTTATGTTGGGCAATgtctataatattttcatgcagaAGAATGTGCCTTTTCTTAGACTGTGGGCACTTTTGATAAGttctaaatatttcaacataagTATACTGTCATAATCTTTTTCTTGTGTATAATGATAAACACAACTACAACTGCTTGTTTAAGCATaagaaatttaattaaagtttattaaacacacacacacacacacaaatttttttattgttaaatgtaGTAATGTTCAGTTGAACAAAATAGGGTCGATTAATTGACAGTAATCAACTAAACTGTGTTATAAAAACCTTCAATTAAAAACTACAGGTCATTAATCTATATACGGTAAGTATACTAACTATACATTACAATTATAGCAACtgactaaatataaattaaaaacttcaaatgctaaacaaaacacaaatataataatt

Function

GO:

id name namespace
GO:0005622 intracellular anatomical structure cellular_component
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043252978.1 True 4721 mRNA 0.36 6 23625007 23630373

Neighbor

gene id symbol gene type direction distance location
mbnl1 mbnl1,LOC107724811,LOC107573627,LOC107745615,LOC107679403,LOC107567699 coding upstream 141 23563764 ~ 23624866 (+)
scg2b LOC107552496,LOC107552495,LOC107660152,LOC107738796 coding upstream 91650 23530770 ~ 23533357 (+)
wu:fb63a08 LOC107749217,LOC107572082,LOC107660374 coding upstream 182306 23424694 ~ 23442701 (+)
LOC122327352 LOC107572994,LOC107569272 coding upstream 364533 23250192 ~ 23260474 (+)
LOC122325295 mex3d,LOC107552694,LOC107713414,LOC107724985,LOC107696452,LOC107596262 coding upstream 599612 23018357 ~ 23025395 (+)
LOC122354999 NA coding downstream 3849 23634222 ~ 23637430 (+)
klf6b klf6,LOC107698482,LOC107679408,LOC107572997,LOC107724813,LOC107569266,LOC107728392 coding downstream 67884 23698257 ~ 23702264 (+)
pitrm1 pitrm1,LOC107698483,LOC107679400,LOC107724807 coding downstream 73128 23703501 ~ 23715237 (+)
trnaw-cca_1 NA coding downstream 106678 23737051 ~ 23737122 (+)
LOC122356725 LOC107698487,LOC107737400,LOC107679394,LOC107572992,LOC107728385,LOC107569271,LOC793909 coding downstream 135585 23765958 ~ 23770492 (+)
G14837 cul3a,LOC107679386,LOC102194569,LOC105907048,LOC107567698,LOC107724810 non-coding upstream 62655 23558249 ~ 23562352 (+)
G14832 LOC101170875,LOC106580681,LOC106612448 non-coding upstream 71774 23550605 ~ 23553233 (+)
G14779 NA non-coding upstream 443850 23180731 ~ 23181157 (+)
G14778 NA non-coding upstream 445252 23179445 ~ 23179755 (+)
G14772 NA non-coding upstream 445876 23158098 ~ 23179131 (+)
LOC122355031 NA non-coding downstream 12090 23642463 ~ 23643550 (+)
G14850 LOC107724821,LOC107698475,LOC107573003,LOC107709797,LOC107680183,LOC107577770 non-coding downstream 38190 23668563 ~ 23683398 (+)
G14841 NA non-coding downstream 60049 23690422 ~ 23691860 (+)
G14859 NA non-coding downstream 89269 23719642 ~ 23762825 (+)
G14860 NA non-coding downstream 91893 23722266 ~ 23722747 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other upstream 77033 23545106 ~ 23547974 (+)
LOC122324535 NA other upstream 619753 23003165 ~ 23005254 (+)
fcer1gl LOC107671799 other upstream 929677 22691199 ~ 22695330 (+)
LOC122327931 NA other upstream 950732 22633529 ~ 22674275 (+)
LOC122327302 LOC107705949,LOC107599389,LOC107675701,LOC107737183,LOC107661566,LOC107586444,LOC107679834,LOC107719545,LOC107717972 other upstream 1139352 22461916 ~ 22485655 (+)
LOC122323670 NA other downstream 305548 23935921 ~ 23939016 (+)
LOC122327416 LOC107728372,LOC107569261,LOC107681443 other downstream 415312 24045685 ~ 24048465 (+)
LOC122327425 LOC107728372,LOC107569261,LOC107681443 other downstream 429039 24059412 ~ 24062202 (+)
LOC122327442 LOC107549368,LOC107569260,LOC107737397,LOC107681447,LOC107681444 other downstream 453465 24083838 ~ 24096897 (+)
abhd17aa abhd17aa,LOC107599293,LOC107757810,LOC107698472,LOC107600230,LOC108433103,LOC105904035,LOC108280794 other downstream 611499 24241872 ~ 24249991 (+)

Expression


Co-expression Network