LOC122354999


Basic Information

Item Value
gene id LOC122354999
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 23634222 ~ 23637430 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253002.1
GCCTGTGTTTTACTGTCAGTAAAGAACATCTACTAGTTGTCAGTCTCAGGCTGAAGCCAAGGCAGAATGATGGAGCGGAAACGCTATTGAGAGAAACCACAAGGCTATGTGTTGTTAAGGAGTTGTCTGTATCGTATGTACGTGAAAGAACATGAAAGAAACCAGTATTTTAGTGGCTGAGGATCAGTTCAGCTGTCTGATCTGTCTGGATCTACTGAAGGATCCAGTGACCATCCCCTGTGGACACAGCTACTGCATGAACTGTATCACAGAGTGCTGGAATCAAGAAGATCAGAAGGGAGTTTACAGCTGCCCTCAGTGCAGACAGACCTTCAGTCCAAGACCTGCTTTAAACAAGAATGTGATTTTGGATGAAATGGTGGAAAGCCTGAGGAAGACAAGATCTGGTTTCAGTTATGCTGGACCTGGAGATGTTGAGTGTGATGTTTGTACTAGAAGGAAACGTAAAGCTGTAAAGTCTTGTCTGATGTGTCTAGAATCATACTGTCAAACTCACTTTGAGTGTCATGAGGAATCTCATACGAGGAAACGACACAAAGTGACCAATGCCACTGGACGAATCCAGGAGATCATCTGCCCCGAACATAACAGACTACTGGAGGTCTTTTGTCATTCTGACCAGAAGTGTATTTGTTTGATGTGTGTGATGAAGGAACACAAAGAACACGAAAATGTTTCAGCTGAAGCACAGAGGACAGAGAAACAGAAACAAGTTGAAGAGACAGTGATAATTATACAGAATAAACTTCAAGAGAGGCAAACAGAGCTTCAGAAGTTGAGAGAGTCTGTGCAGACACACAAGcgTTCTGCACAGGCAGCCGTGGAGGACAGCGAGAGGATCTTCACTGAACTCATCCACTGCGTGAAGAGAAGACGCTCTGAGATGACACAGATGATCAGAGATCGAGAAAAGACTGAAGTGAGTCGAGCTGAAGGACTCTTAGAGCAACTGAAGCAGGAGATCGATGATCTGAAGAAGAGAGATGCCGAGCTGGAGCAGCTTGTACGCACAGAAAACCACATCCGTTTCCTACAGAGTTTTCCCTTTCTGTCTGTTCCTCCTGCATCTTCAGACAGCACCGGTGTCGGTTCTCTGCTCTCGTATGATGATGTGAGAAGCTCTGTCTCTATAATAAGAACAAAATTTTTGAATTTCTGCAGAGAGggtatatagaaaatataaatggtGGTGGAGGTAAAGTATAGACTCATCTTgtaaaataagttaatatataaatattgtttggaTGCGAGTAGTAAAAACATTATACTTGTTCTTAATACATTATTGGTATTGATTAGTAGTAATATTATAATGGtaatagtttaatattattgatatctTTATTAGAtatctgtatgtttgtgtatagtGAATATTGAAATCCATCACTGAACCCCAAAGAGAGCACTTCTTACATTGTAAgtgttacaaataataattcaaataaaacaaacgctagacacatttatacatttttaaaggtgaTGTTTTTAACTCCAACCAGTGGCAGACAATGGGAATAtctcatatttaaaattttttgttatttagtaATTCTGTCTCACTAGtgtcaattttttaaatacatttttattaaactgtttcATACCGTTTTCTGTAATAGATCAGTGATCTATTTTTGCTACTCGTTGCTATATGTTCCGACAGATTTTTCAAGAGGTGAAAttgtaaattaatgtaaaatactgaaaagctttttattttattttttgttctccGTTTCGcggaaatgtaaatgtactgtgtgtattattaaaatgcaataaaatatatgaaaaagaa

Function

GO:

id name namespace
GO:0005622 intracellular anatomical structure cellular_component
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253002.1 True 1828 mRNA 0.38 5 23634222 23637430

Neighbor

gene id symbol gene type direction distance location
LOC122354760 NA coding upstream 3849 23625007 ~ 23630373 (+)
mbnl1 mbnl1,LOC107724811,LOC107573627,LOC107745615,LOC107679403,LOC107567699 coding upstream 9356 23563764 ~ 23624866 (+)
scg2b LOC107552496,LOC107552495,LOC107660152,LOC107738796 coding upstream 100865 23530770 ~ 23533357 (+)
wu:fb63a08 LOC107749217,LOC107572082,LOC107660374 coding upstream 191521 23424694 ~ 23442701 (+)
LOC122327352 LOC107572994,LOC107569272 coding upstream 373748 23250192 ~ 23260474 (+)
klf6b klf6,LOC107698482,LOC107679408,LOC107572997,LOC107724813,LOC107569266,LOC107728392 coding downstream 60827 23698257 ~ 23702264 (+)
pitrm1 pitrm1,LOC107698483,LOC107679400,LOC107724807 coding downstream 66071 23703501 ~ 23715237 (+)
trnaw-cca_1 NA coding downstream 99621 23737051 ~ 23737122 (+)
LOC122356725 LOC107698487,LOC107737400,LOC107679394,LOC107572992,LOC107728385,LOC107569271,LOC793909 coding downstream 128528 23765958 ~ 23770492 (+)
lpar5a LOC107737401,LOC107698486,LOC107572991,LOC107679392,LOC107728381,LOC107569267 coding downstream 135450 23772880 ~ 23775183 (+)
G14837 cul3a,LOC107679386,LOC102194569,LOC105907048,LOC107567698,LOC107724810 non-coding upstream 71870 23558249 ~ 23562352 (+)
G14832 LOC101170875,LOC106580681,LOC106612448 non-coding upstream 80989 23550605 ~ 23553233 (+)
G14779 NA non-coding upstream 453065 23180731 ~ 23181157 (+)
G14778 NA non-coding upstream 454467 23179445 ~ 23179755 (+)
G14772 NA non-coding upstream 455091 23158098 ~ 23179131 (+)
LOC122355031 NA non-coding downstream 5033 23642463 ~ 23643550 (+)
G14850 LOC107724821,LOC107698475,LOC107573003,LOC107709797,LOC107680183,LOC107577770 non-coding downstream 31133 23668563 ~ 23683398 (+)
G14841 NA non-coding downstream 52992 23690422 ~ 23691860 (+)
G14859 NA non-coding downstream 82212 23719642 ~ 23762825 (+)
G14860 NA non-coding downstream 84836 23722266 ~ 23722747 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other upstream 86248 23545106 ~ 23547974 (+)
LOC122324535 NA other upstream 628968 23003165 ~ 23005254 (+)
fcer1gl LOC107671799 other upstream 938892 22691199 ~ 22695330 (+)
LOC122327931 NA other upstream 959947 22633529 ~ 22674275 (+)
LOC122327302 LOC107705949,LOC107599389,LOC107675701,LOC107737183,LOC107661566,LOC107586444,LOC107679834,LOC107719545,LOC107717972 other upstream 1148567 22461916 ~ 22485655 (+)
LOC122323670 NA other downstream 298491 23935921 ~ 23939016 (+)
LOC122327416 LOC107728372,LOC107569261,LOC107681443 other downstream 408255 24045685 ~ 24048465 (+)
LOC122327425 LOC107728372,LOC107569261,LOC107681443 other downstream 421982 24059412 ~ 24062202 (+)
LOC122327442 LOC107549368,LOC107569260,LOC107737397,LOC107681447,LOC107681444 other downstream 446408 24083838 ~ 24096897 (+)
abhd17aa abhd17aa,LOC107599293,LOC107757810,LOC107698472,LOC107600230,LOC108433103,LOC105904035,LOC108280794 other downstream 604442 24241872 ~ 24249991 (+)

Expression


Co-expression Network