parp2 (parp2,LOC107668981,LOC107738156,LOC107706370)


Basic Information

Item Value
gene id parp2
gene name parp2,LOC107668981,LOC107738156,LOC107706370
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 17518812 ~ 17524769 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253119.1
AAACAAGCACAGCGCTCAGTTCGTTCCCAGACAAAAGGTCCGCGCTAGTATACTTTTCGCGCCATCCAGCACAGCTACTTAGTGATTCTAAATCGTAGGTGTTCTAGGAAAAGCATGCGACGAACAAGGAGCTGCCGGGGCAAGTCTGCTGCAGATTCAGGCAGTGACGCCTCAGAGGCGAAGACAAtttggcAGTGGAAAGGGGACGAGGATGAGTGGGAACCGTATCCTCCAGAGGTCTGTGTCCAGCTGGATACAGCAAAGCAGGCGGGTGAAAAGTCAGTGTCGCTGGCGATCGGACCTGGTTATGTAGTGGATCTTGTGAAAATGACTCAGACCAATACCGTCACCAAGTATAAACGAAAAATACGCCTTCAGAAAGTGAAGTCAGAAGATGCAAATGAAGGGAATGCTTTGAATAGCAAAAATGGAGTGGCGGGTGTTGTTCAGgtcaaagcagaaaaagaagaggaagaggagcaaCCAGTTTCCAAGAAGAGACGCAATGAAGGCAGGAGTCAGAGAGCGAACAAAGCCAAGGCCGTCGTAAAAGAGGAGAGTGAAGAAGAGGTTGTGAAGACGGTAATTATGAAAGGAAAAGCCCCAGTTGATCCGGAATGCAAGGCTAAAATTGGAAAGGCCCACGTCTACAGCGAGGGGGCTGATGTATATGATGTAATGCTGAATCAGACAAATCTTCAGttcaacaacaataaatactACCTGATTCAGCTTCTTCAGGACGACAATGGAAAAGCCTACAGCGTTTGGATGAGGTGGGGACGAGtgggTAAAGCAGGACAGAGCAGCTTGGTTAACTGTGGGGGTAATCTTGCTCAGGCCAAAGACACCTTCAAAAagaaATTCCTTGACAAGACCAAGAATGATTGGGAGCATCGAGTGCATTTTGAGAAAGTGGCAGGAAAATATGACATGGTGTTTGTAGACTACAGCACTGAAGACCAgGAGAAGGACAAGGCTGTAGTATCCTCTCCTCCTGAAATAAAGCCCTGTCAACTGAGCAGCAAGGTCCAGTCTCTCCTAGAGCTCATATGTGACCTCAAAGCCATGGAAGAATGTGTGCTAGAAATGAAGTTTGACACCAAAAAAGCCCCGCTTGgaAAACTAACTACAGAGCAAATTCGAGCTGGCTATGCCTCTTTGAAAAGGATTGAGGagtgtttaaagaaaaagaataataataaagaactCTTGGATGCATGCAACCAGTTTTACACTCGCATCCCCCATGACTTTGGGTTGCGGACACCCCCCATAATACGCACAGAGGATGAGCTGAAGGAGAAAATCGCTTTGCTTGAGgCTTTAAGTGACATCCAGATAGCAGTGAAAGTGGTTCAGTCTAGTGTTCAGAATGATGAGCATCCTTTGGACAGACAGTATCATTCACTACAATGTCAGCTGCAGCCACTGGACTCTAACAGCAATGAATACAAGGTTATAGAGAGGTATCTTCAGTCCACTCACGCGCCCACCCATACTGACTACACAATGACCATTCTGGATATCTTTGCTGTGGAGAGAGAAGGCGAGAAGGACAACTTCTGCTCCGAGATGAAAAACAAAATGCTCCTGTGGCATGGTTCCCGTTTGATGAACTGGGTGGGGATCCTGAGTCAGGGGCTGCGAGTGGCCCCTCCAGAGGCTCCCGTGACCGGATACATGTTTGGTAAAGGGATCTACTTTGCAGACATGTCATCTAAAAGTGCCAACTACTGCTTTGCCAATCAGAAGAACAACCAAGGACTCTTGTTGCTGAGCGagGTTGCCCTTGGGAACAGTAATGAACTTTTGGATGCAGATTACAATGCTGACCAACTGCCTTCAGGAAAACATAGCACTAAAGGCCTGGGGCAGACTGCACCCGACCCAAACAACTATGTTGCATTGGATGGGGTGACCATACCCATGGGGCCCTCTGTGAAGACCGGGGTGGGACAGAAGGGAGGTTACTCCCTTCTTTATAATGAGTACATCGTTTATAACCCTGATCAAATACAGATGAAGTATCTCCTCCGGGTTCAGTTTAACTTTTCCTCGCTGTGGTGAGGCACACAAGATTCTTTACATTGAGAACAGTTTTAGAGGTGAAGGACCTAGACTGTAGTTATACAGTGTTATGCTCATGTGTTCATGAATTTCAAAAAACTTAAACATACTGTTCTGTCAATGTCTTTTGTATCTTCAATAGCTATCTGAAATTCATGAGTAATATCCGTTGACATAAGTGGagtaatgcattaattaatcaaagcgaaataaaatatgacattttctaCTGTCACTTTA

Function

symbol description
parp2 Predicted to enable NAD+ ADP-ribosyltransferase activity and protein ADP-ribosylase activity. Predicted to be involved in double-strand break repair and protein poly-ADP-ribosylation. Predicted to act upstream of or within protein ADP-ribosylation. Predicted to be located in nucleus. Predicted to be active in nucleolus. Is expressed in brain; head; and proliferative region. Orthologous to human PARP2 (poly(ADP-ribose) polymerase 2).

NR:

description
poly [ADP-ribose] polymerase 2

GO:

id name namespace
GO:0006471 protein ADP-ribosylation biological_process
GO:0003950 NAD+ ADP-ribosyltransferase activity molecular_function

KEGG:

id description
K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253119.1 True 2310 mRNA 0.46 18 17518812 17524769

Neighbor

gene id symbol gene type direction distance location
sdr39u1 sdr39u1,LOC107668982,LOC107738159,LOC107557702,LOC107659398,LOC107591428,LOC107706372,LOC107579374 coding upstream 6997 17508786 ~ 17511815 (+)
ltb4r2b LOC107668991,LOC107738160,LOC107706371,LOC107659397 coding upstream 12690 17501343 ~ 17506122 (+)
ftr66 ftr66,LOC107668987,LOC107591451,LOC107706375,LOC107659402,LOC107557692 coding upstream 32958 17480704 ~ 17485854 (+)
myadmb si:dkeyp-66d1.7,LOC107706376,LOC107668989,LOC107591450,LOC107738251,LOC107659403,LOC107557715,LOC103040076 coding upstream 39872 17473538 ~ 17478940 (+)
phc3 LOC107738171,LOC107591347,LOC107557539,LOC107706383 coding upstream 175753 17333696 ~ 17343059 (+)
cbln13 NA coding downstream 11744 17536513 ~ 17537813 (+)
LOC122357951 LOC107591364,LOC107706362,LOC107558878,LOC107659385,LOC107738151,LOC107738210,LOC107591430 coding downstream 106595 17631364 ~ 17652724 (+)
apol1 LOC107557777,LOC107659387,LOC107706364,LOC107668938 coding downstream 157735 17682504 ~ 17687392 (+)
si:rp71-1g18.13 si:rp71-1g18.13,LOC107668936,LOC107738148,LOC107591365,LOC107706363,LOC107659381,LOC107557749 coding downstream 163072 17687841 ~ 17694911 (+)
dcaf8 dcaf8,LOC107706361,LOC107738146,LOC107668937,LOC107659382 coding downstream 175538 17700307 ~ 17709682 (+)
G13076 NA non-coding upstream 38318 17480223 ~ 17480494 (+)
G13075 NA non-coding upstream 38710 17479724 ~ 17480102 (+)
G13007 insra,LOC107591352,LOC107558844,LOC107706379,LOC107738166,LOC107668948 non-coding upstream 131264 17386062 ~ 17387548 (+)
G12995 NA non-coding upstream 232982 17281260 ~ 17285830 (+)
G12977 LOC107706390 non-coding upstream 245650 17272654 ~ 17273162 (+)
G13049 LOC107738153,LOC107668935,LOC107591359 non-coding downstream 2408 17527177 ~ 17529390 (+)
LOC122357958 NA non-coding downstream 85381 17610150 ~ 17612100 (+)
G13112 cbln10,LOC107738246,LOC107591369,LOC107668921 non-coding downstream 151303 17676072 ~ 17678382 (+)
G13121 NA non-coding downstream 174820 17699589 ~ 17699825 (+)
G13101 LOC107591379,LOC107668986,LOC107704284,LOC107557939,LOC107738140,LOC103040079,LOC108438942 non-coding downstream 181227 17705996 ~ 17768737 (+)
sppl2 sppl2,LOC107738168,LOC107706381,LOC107591351,LOC107659410,LOC107668984 other upstream 149710 17362245 ~ 17369102 (+)
golim4b golim4b,LOC107591324,LOC107684437,LOC107706331,LOC107559125,LOC107659375,LOC107738257 other upstream 478909 17032139 ~ 17039903 (+)
LOC122361622 NA other upstream 742461 16724614 ~ 16776351 (+)
LOC122323293 NA other upstream 1062280 16450132 ~ 16456532 (+)
G12531 LOC107722077,LOC107568983 other upstream 1250015 16267043 ~ 16268797 (+)
G13114 tep1,LOC107591368,LOC107706362,LOC107659385,LOC107738210,LOC107591364,LOC107738151 other downstream 42072 17566841 ~ 17567916 (+)
G13111 LOC107738210,LOC107591364 other downstream 82483 17607252 ~ 17608092 (+)
LOC122325453 LOC107668965 other downstream 254570 17779339 ~ 17782364 (+)
G13137 NA other downstream 259410 17784179 ~ 17816764 (+)
nedd8l nedd8l,LOC107591390,LOC104949953,LOC104931181,LOC107559219 other downstream 345489 17870258 ~ 17871416 (+)

Expression


Co-expression Network