cbln13


Basic Information

Item Value
gene id cbln13
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 17536513 ~ 17537813 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253189.1
TCCAAACTGTGCAAAATTGACACACACCATAAAAAGCATAGGTATAGGTAGCTGAAGATGGCAGCTCAAAAGACGCTATTATTGCTTTGTGTTGGGGTCTCCCTGGCACAAGATTTCATTACATCTGAGCAGTTTAATAAAATTGAGCAAAGACTGAGAGCCGCAGAGGAAACACTGAAAGAGCTGAAGGTAGAGAATGAAGCTCTAAGGATTTTCACAAAAGCCTTGAGTGAAAAACATGAATCTATGCAGGCTGAAAATGAagTCAAAAAGATTGCCTTTTCAGCTGGATTTTTGGCATCTGGATCACAACAGTTTGGTCCCTTTGATGTTCGGAAAACGTTGGTGTACCAAAAAGTCTTCACTAACACTGGCAATGCTTATAACCCCGACACCGGTGTATTCACAGCACCACTGAATGGAGTCTATTTCTTCAGATTTTATGCTCATTCTCACGGTGGTAAACAAATGGCAGTCAGTCTTTCTAAAAATGATCAGACCCAGTGCTCTGTATTTAACGAGAAGCCTGCGTCCAATGGTAATGCCAGTAACGGTGTTGTTCTCTCACTGCAGAAGGGCGATAAAGTGTACACTGAGCTGTGGAGCAATAGCTGGGTTTTTGACAATGAAAGCAGCTTCACTAGCTTCAGCGGTTTTCTGCTTTTCCCCTTGTGAGTGTCCACAGAATCCAGAACTggatgaaaaaaagatgtttatgGCATAGTGTTGTAATGCTAATACTTGtgagatatttttttcaaaggaaGAGGACATTGTATGACCCTCAAataatttacccaaaaatgaaagtttactGAGAACATTAggtctcagcaatggatcctctgcggtgaacGGGTGTTATCAGAATATGagtgaataaaaatgactttttttaaaaaaccaaaaaactttaAACCGTTGCTAAACTGTACCTGAATTTTCATGACAGTAAACTTTGAGTCAAATCCA

Function

GO:

id name namespace
GO:0042742 defense response to bacterium biological_process
GO:0048514 blood vessel morphogenesis biological_process
GO:0043066 negative regulation of apoptotic process biological_process
GO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process biological_process
GO:0045930 negative regulation of mitotic cell cycle biological_process
GO:0043027 cysteine-type endopeptidase inhibitor activity involved in apoptotic process molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253189.1 True 972 mRNA 0.40 4 17536513 17537813

Neighbor

gene id symbol gene type direction distance location
parp2 parp2,LOC107668981,LOC107738156,LOC107706370 coding upstream 11744 17518812 ~ 17524769 (+)
sdr39u1 sdr39u1,LOC107668982,LOC107738159,LOC107557702,LOC107659398,LOC107591428,LOC107706372,LOC107579374 coding upstream 24698 17508786 ~ 17511815 (+)
ltb4r2b LOC107668991,LOC107738160,LOC107706371,LOC107659397 coding upstream 30391 17501343 ~ 17506122 (+)
ftr66 ftr66,LOC107668987,LOC107591451,LOC107706375,LOC107659402,LOC107557692 coding upstream 50659 17480704 ~ 17485854 (+)
myadmb si:dkeyp-66d1.7,LOC107706376,LOC107668989,LOC107591450,LOC107738251,LOC107659403,LOC107557715,LOC103040076 coding upstream 57573 17473538 ~ 17478940 (+)
LOC122357951 LOC107591364,LOC107706362,LOC107558878,LOC107659385,LOC107738151,LOC107738210,LOC107591430 coding downstream 93551 17631364 ~ 17652724 (+)
apol1 LOC107557777,LOC107659387,LOC107706364,LOC107668938 coding downstream 144691 17682504 ~ 17687392 (+)
si:rp71-1g18.13 si:rp71-1g18.13,LOC107668936,LOC107738148,LOC107591365,LOC107706363,LOC107659381,LOC107557749 coding downstream 150028 17687841 ~ 17694911 (+)
dcaf8 dcaf8,LOC107706361,LOC107738146,LOC107668937,LOC107659382 coding downstream 162494 17700307 ~ 17709682 (+)
LOC122361465 LOC107591375,LOC107668940,LOC107557836 coding downstream 172021 17709834 ~ 17714790 (+)
G13049 LOC107738153,LOC107668935,LOC107591359 non-coding upstream 7123 17527177 ~ 17529390 (+)
G13076 NA non-coding upstream 56019 17480223 ~ 17480494 (+)
G13075 NA non-coding upstream 56411 17479724 ~ 17480102 (+)
G13007 insra,LOC107591352,LOC107558844,LOC107706379,LOC107738166,LOC107668948 non-coding upstream 148965 17386062 ~ 17387548 (+)
G12995 NA non-coding upstream 250683 17281260 ~ 17285830 (+)
LOC122357958 NA non-coding downstream 72337 17610150 ~ 17612100 (+)
G13112 cbln10,LOC107738246,LOC107591369,LOC107668921 non-coding downstream 138259 17676072 ~ 17678382 (+)
G13121 NA non-coding downstream 161776 17699589 ~ 17699825 (+)
G13101 LOC107591379,LOC107668986,LOC107704284,LOC107557939,LOC107738140,LOC103040079,LOC108438942 non-coding downstream 168183 17705996 ~ 17768737 (+)
G13175 LOC107694667,LOC107706287,LOC107558053 non-coding downstream 341746 17879559 ~ 17881219 (+)
sppl2 sppl2,LOC107738168,LOC107706381,LOC107591351,LOC107659410,LOC107668984 other upstream 167411 17362245 ~ 17369102 (+)
golim4b golim4b,LOC107591324,LOC107684437,LOC107706331,LOC107559125,LOC107659375,LOC107738257 other upstream 496610 17032139 ~ 17039903 (+)
LOC122361622 NA other upstream 760162 16724614 ~ 16776351 (+)
LOC122323293 NA other upstream 1079981 16450132 ~ 16456532 (+)
G12531 LOC107722077,LOC107568983 other upstream 1267716 16267043 ~ 16268797 (+)
G13114 tep1,LOC107591368,LOC107706362,LOC107659385,LOC107738210,LOC107591364,LOC107738151 other downstream 29028 17566841 ~ 17567916 (+)
G13111 LOC107738210,LOC107591364 other downstream 69439 17607252 ~ 17608092 (+)
LOC122325453 LOC107668965 other downstream 241526 17779339 ~ 17782364 (+)
G13137 NA other downstream 246366 17784179 ~ 17816764 (+)
nedd8l nedd8l,LOC107591390,LOC104949953,LOC104931181,LOC107559219 other downstream 332445 17870258 ~ 17871416 (+)

Expression


Co-expression Network