amer3 (LOC107710619,LOC107700565,LOC107677756,LOC107732953,LOC107553265,LOC107569737)


Basic Information

Item Value
gene id amer3
gene name LOC107710619,LOC107700565,LOC107677756,LOC107732953,LOC107553265,LOC107569737
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 8651917 ~ 8662323 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253247.1
TATTCCGTCTTCTGATTGGCTATCGTAATTATCTTCACACGCGCGCTGACAGCCGGAGCGTCCCATCTTGTCACGCGCTTGTGAACCGCCAGCTCCCGCCAAACGCCTTCTTGTCACAATCTGCTTCAGTTATGTATATGAAAACATGGAGCTGTCAAAGAGCGAAGATTCTTCAGATGATCGGAAGAGGACAAGTAAGGCACATGGCCGATCTAAAGGGCCTGAAGAGCACAAATCTCAAACAACCACGAATAATGAATTTGTGAATACACACAGTACTGATGAAAGCCCATCCTCACTGCCTGTTCCAGACACTTTGGACATACTGTCTCCAGGGGTTAGTGATACACTCTCAGAAGGTCACAGGCGGCTCCGTGGCTCTTTTAAAAGAAGCAGAACCCATGACTGTGTGAGAGGAACGGGACAGCAGCAGGCTGAGATCCCTGGATACAAAGATGGGACCAACTGGCGCCAGCACCACAAGCTGGTCACCAGTGTCAGCTTTTCAGGATTCGAGGCGCCTCTAAGGTTGCTCCGTGAGAATCGGGAAACATCTGGCAGCAGTCGTGAAATCATTGATTACCGTAACCTAACACCTCAAGTGCCCTTCGTTCCCTGCATAGCCAAATCCATTCCTAAAAAGAGGATCTCCCTGAGGAAATCTAGGAAGGCCATTAAGGACTTGTTTGTTcacaaaagacacaaacacGAGAAAGCTATGTCACCAAATACACCATGTCGTGTTGTAGGTGAAAATGTTCCTTCATTGAAACGGACCAGGAAGACAGTAAGGCACCGAGAACGTACCAACGCAGGAAGCAGATTTAATGAAGAACTCAGTGAGACTCCCTCTGACTCTTCCAGTGAATGTAGCGCTAATGTCTCTGAGGATGTTGCTTCATTAAAAAGCTTTGGTTCTCAGGCTGGCTGCGGTGAGATATTTGCTGATGATCTTGTATCACCTGAGGGGGTCCTTAGCCCAGATCGTCACAAAGTTGCCTGTGAACCTGCAAAGCAAAGCCCTACTACTGCAGGTTTCCAGGGAGGTAAGGAATGTCTGGCTTCTCCAGCTCACGCTGAGGTCCTGGACATGTTTGGGTTGTGGGAAACCCTAAACAGAACTTTGCTATTAGGGCAAAGTTCAAAATCACAAGGACGTGCAACAAAACCCACAACACCTATCGCAAAATCTCCTTCCACAACCAAGTCTGAAGATGTAACGGCAAATACACCAGGACCTGTTGAGTCAGAGATCATAGAATTTAATACTAATGTGATAACACCCAAAAGTGACAACCAAGGGAACACCAGTGATGAGGGCTACTGTGATTATGTTTCTCCCGGTTTTGAGGACCACAGCCGAAGTTCCCTCACTCCAGTGCATTCCAGCAAGTTCCTTAGGGACACATACAGTGGAGATGCTCTTTACGAGCTATTCTGTGACCCCAGTGATGCAGAGATTACCCCAATCTTTGATGATGAGCTCAATCTAACAGACAGCATTGTTGGCCAATGCAGTGATCTTCCACTATCCATGTACAGCTTCCATGTTGGAGCAGAGGAGAATCTTGCCCCACCTTTGGCTCAGGACTTTGTTGGTCATGAGCTTCTGCAAAGCAAATGGATGGGGAAGGATTGCTTACTAAAGCTTTGTGACACTGAGATATCCATGGCTATGGGTATAGTTAACTGGCTGAAGCACAGGACAGACAAAAGTAACTCAGCAGAATCCAGATCTTCAAAAGTTAGCAGTGAAGATACAAGTGATGTATGTCTAAGATGCGAAACCCAGACAGCAAGaattagaaaacaaacaaaaggagCAAGAACTGTTAATGGTAGAAGAGACGGTGTTGATTTCAATGAATCAAGTAAAAAAAGCTATGGTGTTCTGCCCTCAAAATATGTCGCAAATACAATGGTGTCCACCTTGGCCTCTCCAGAGAGCCAACCCAGGACTCCAATGAgtggtgtgtgtttcaggatATTCAATATCGACTCTCCTACGACTCCAGGCGGAGATTTGCAGTCCCCAGTGGTAAGCTCCCCTGGCTCTGGGACAAGGTCTTTGTTTGTGTTGGCTATAAACAAGGATTCTCTTTGTGAACCCTGCAAGAATTCCCTGAAAAATGGAGCAAAAGATCTGCACCTGTGCCGTTCTTGTATGTCCCTCATTGAGCACATCAAGACTTCAGACCTTTGGGCACATGCCAGTCATCCCAGGTCCACTCCAACTCCACAGCCAATAACCAGAGACCTACTCTCTCCGGCCAGCACTTGCGGGATAAGAAGTGACATCAGCATAGCTTCCCTTGTTGAGCAGTGTGCTAGTCAGTTGTCTTCTTTGAAAATCAACTTAACACAAGCTCAAACAAGCTGTGAGATAAGAGATGCCTTCGTGCTTGATCAAGGGGCTAAAAGGAACAAAGAACTGTGTCAAAAATCTGTGAAGTCAAAGCACAAGAAAAGGCCAGTGGCAACTACTGAGAGAGGCCCGCATTCTAGACATCGCTTGAGGAAGTCCAGCTTTTCTGAAGATGCGCAACCTTGCCTTTTACAGACTGAGGAACTTGTCACTAACAGTGCTTCCGGTGATTTGTTGCTGGAGACGTACGGTCCATGGGATGTTGAATCTGGTGATGCAGACGTATCTCAAGCTACCAGGCCAACATCTCTTCCTCTCATGGCCTCTGCCTCTTCAGATGTTTTTTGCAGAGACCATCATAATAAAGTGGAAGAGGGGAGCTCATCCAAAAAGAAGCATAGATTACGTCATCACAGGAAGTCTGCTGTGAATAGTGAAGGATCATGCAGTGTCTTTCCAGGGGATAAGAAAGTAGAACGCAGATGCCGAATGAAGAAGTGAAACAGATCCTGACTGTCTTCAACTCGTTTCTTCCGTCCAGTAGCTCAGCCCTCTGGTCGGCTGACCTCTCTACCAGCTGTCAAAGTCTCTACCTTTCGTCCGCAGGAAATCTGACATGTTTGCTCATTTTACTGTCAACTCAGCGACATTGTCAGCCTGGAGCAACAACAGGTCTGTTGAtctgtttgtttgaaaaatgtcatttgtcTGGAACCTGTCgtatctgtgtttttctctctctacgTAGTGTTTCTGCAATCACTGCTATTTTTTATTGCAAGTTTATTGCTGGAGTTTTCAAACCAAACGTCAATGACAGTACACACTAGTGCAATAActacaataacactttttaaacTGTTGTCTCAATCAGGAAAAGTTATGGAATTTGACATTGTGCGAAGTTATACTTCAGCTTGTTTTTATACATCGAAACAAACTCACAAGCTATTTGAAAAGCTCTATTCTGGAGTTTGGAAGGGAAACGGCCAATTTCTTGAAAGGGTTGGGACAGCTGGAGACATAGCAATGGAATCAACttagcattttcatttgtcCAATTAAAGTTCAAAACAGACACGCATAATTGTGTATCAGTGAACAAATGAGGTAAAGTAGCCCTTTGAATGAAAGCCTCTGATCTGGCTGATGTGACCAGAATTGATGAGAGACCCCCAAAAAGGGTCCATTCATACATATAGTAGGCCTCTTCACAAAGCAGGCAGGTGGCACTTTTACTTGTCGTCTTTGTCCATTTTGGTATGTAATTCTGCCAAGTCTGTCCCTTTTTCACTTGGTAAATACTTCAACTGAACCTAGACTCCAATCGTCTAGTTAGGGTCGCTATTGAACAGAATTCCCATAAACACTACCCCCGGTATGACTAATCTATATATGTCTGCACACCTATCTTTGAGCAGACAGTTATTTGCTTATATATAGACATCTGCACATCTATATTTGGGTGGCCCGGTTAACATTGAACTTCGAGCCATTTATTTATACTCTCAGTGTATATAGGAATTAGGGGTGTGCGATATACCGGTAGACACGATTAACCAGTAGAGATTTGTCAACCGGTAGAGATTTTGGAGTATTGTTTCTTTCAAATGACACGCTCATGGTGATGAAAACGTATCActtgcacatttttaaacactttcaAGCACTGTCAGAAAGGCACATGCGCTCGTAGAGTGAGGATTGAGCGAGTGAGTGagttatttttgccattttatagGCCTTGAAcagttaaacaaacacaaatgccATCTTTGCAAGTATCCTTAAACACAGCAATTTAGGTCTTCGTTGAAAGCAGCTGAGAAAGAAAGCACTTGTAACAGTATATTGGATCcaggcagctcttaaagtgacagcagtctaatattcCTTCTTGAGTAAATCACTTTTATAACTGTaatagaaagaaatatatatttaatttacatagtgaagaatttgtattcatttgatTATACAATGTAgcaattcttatttatttgtactgCTGTAGATTTTTGTCATACTGCttataattagtttatttaatcGCTGTTTACTTTTCTTCACGGagcgtgattttttttatttatgcttggtattttttttatgaaacggACATTGAAATTACAaaattgacaataaaaaaaaaaattatatttctaggTCAGAAAAATACTTGATATCCTAAAGACCAcatttaatgctaaaataactagATTGTGATATATTGTGCAATACAATTACTCATATTGTGATATAAGATTTTGGTCATATCGCCCACGCTAAATATGAATAAACCAAAATTTGAAAAGATAAAGACAGATACCAAAGAAATGGTACCTTTTAAAAGTGTCGGGTCCTCGCTCTAAACAAATGTAAGCCGAAGGGTCATTTCGAAGAAGCCCTTTCTGCTATAACCTGAGCAGCTATTAGTAAAGTATTGTATTTCAGGGCCTCAACCTGTTTTCCATTAGATCAGCATCAGCCATAACAACATCTGGTGCAGAGCTGGTGTCAGTAATCAATGCAGTGATAATCCTCAAATAAAAGCACTCTAGTCCGGCATCGACAATGAAAAATGTAAGCGCTGAACAGAAGCTTTTCAGATAGCTTactttttcctcattttatttcacatacttAAAACTGGGGAAGTTGTATTATCTGTGCTGCATTTTTCTGTACAAATGTAATCATATTACTTCTCAGGATAAGCTGTGTCAAAATTCAAGAATTAGATAACGGATAATAGCATGTGAGACTTGAACCACTGACAATATCCTAATAACATGAATGACTATATTGCGAAACGAATGTGTTGCATGAATTTGTAAGCTGTATAAACTATGTAAAGTGCTGCTTTTGTTCAAATGGAGTAGTAAGAAGGTTCTTTTGTCACCTCTTAGTGCCATTACATTCTTTTCAAGACGGGGCAGCTGACATTTATCGTAGTTCTGTGCAATATTTATATCGATGTGCTTGCCTTTGTCACCGAGTATTAATAAAAACCTATTTATGAATCCA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107710619

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253247.1 True 5395 mRNA 0.42 3 8651917 8662323

Neighbor

gene id symbol gene type direction distance location
atr atr,LOC107677746,LOC107700496 coding upstream 371 8630412 ~ 8651546 (+)
atp1b3a atp1b3a,LOC107700561,LOC107563307,LOC107710617,LOC107732952,LOC107677716,LOC107553263 coding upstream 52322 8590241 ~ 8599595 (+)
clcn2a clcn2,clcn2a,LOC107732945,LOC107710554,LOC107677884 coding upstream 165013 8439879 ~ 8486904 (+)
cc2d1b LOC107563292,LOC107710553,LOC107700553,LOC107677533 coding upstream 248703 8386877 ~ 8403214 (+)
elovl1a elovl1a,LOC107553254,LOC107732201,LOC107700551,LOC107710545,LOC108438881,LOC103047025 coding upstream 269474 8373238 ~ 8382443 (+)
LOC122361595 LOC107710620 coding downstream 168497 8830820 ~ 8841734 (+)
LOC122359011 arhgef4,LOC107700563,LOC107710620,LOC107553266,LOC107732940 coding downstream 186004 8848327 ~ 8878100 (+)
vav3b vav3b,LOC107700567,LOC107732951,LOC107677852,LOC107553269 coding downstream 228450 8890773 ~ 8929310 (+)
col11a1b col11a1b,LOC107680048,LOC107594685,LOC107710593,LOC107564536,LOC107700498,LOC107745694 coding downstream 425371 9087694 ~ 9154434 (+)
tecrl2b tecrl2b,LOC107564537,LOC107745691 coding downstream 511530 9173853 ~ 9180307 (+)
G10284 LOC107710615 non-coding upstream 62843 8587377 ~ 8589074 (+)
G10271 NA non-coding upstream 90404 8560098 ~ 8561513 (+)
G10226 NA non-coding upstream 123210 8522402 ~ 8528707 (+)
G10219 pbx1a,pbx1b,LOC107677498,LOC108272157,LOC107564502 non-coding upstream 389087 8219265 ~ 8262830 (+)
G10200 NA non-coding upstream 562446 8083536 ~ 8089471 (+)
LOC122356731 NA non-coding downstream 100516 8762839 ~ 8765451 (+)
G10371 NA non-coding downstream 136268 8798591 ~ 8798996 (+)
G10374 NA non-coding downstream 217619 8879942 ~ 8880453 (+)
G10431 NA non-coding downstream 267181 8929504 ~ 8930073 (+)
G10433 NA non-coding downstream 277646 8939969 ~ 8941186 (+)
G10212 NA other upstream 544140 8106865 ~ 8107777 (+)
G10108 NA other upstream 1069532 7504622 ~ 7582385 (+)
gng12a gng12a,LOC107700509,LOC107716954,LOC107551713 other upstream 1351816 7285670 ~ 7300101 (+)
lrrc53 LOC107700485,LOC107588905,LOC107716924 other upstream 1546125 7098303 ~ 7105792 (+)
G9925 LOC107563058,LOC107549254 other upstream 1664798 6986298 ~ 6987119 (+)
olfm3b olfm3b,LOC107700521,LOC107710604,LOC107745696,LOC107680049 other downstream 500288 9162611 ~ 9171915 (+)
arpc5a arpc5a,arpc5,LOC107722639,LOC107693740,LOC107564704,LOC107677751,LOC107718183 other downstream 1084247 9746570 ~ 9751212 (+)
znf414 LOC107722538,LOC107564712,LOC107693731,LOC107691619,LOC107718126 other downstream 1249305 9911628 ~ 9916861 (+)
selenof selenof,sep15,LOC107693704,LOC106598901 other downstream 1496209 10158532 ~ 10161809 (+)
lyrm4 lyrm4,LOC107718092,LOC107688446,LOC107722638,LOC107689406,LOC107688520 other downstream 2000406 10662729 ~ 10665110 (+)

Expression


Co-expression Network