bokb (bokb,LOC107693720,LOC107722584)


Basic Information

Item Value
gene id bokb
gene name bokb,LOC107693720,LOC107722584
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10049401 ~ 10053443 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253584.1
AAAAAAGGTCGtcttttaacatgatttttaagcaattaatattaatgcagcACGTTATGAATTGCATGAGATTGATAATAATCTAGGATTTGAAAGAGATGATTAGAGTACGTTTAATTTGATATAACTAGACTGCAAGCATTGCAAGTCTTGCCAGGATGCCATAGACCGTTTATATTTGGACCAACGTTAAGCCGTTCACTCGGTTGATTAGTGGTTACCTAAGCATTCCAGGTAACGAGAAAAATCGCTTCCAAGTGTCTGATTCAGGGCACAGGCGAACAGCGACCTCAGACAGCACGATGGAAATACGACCGAAAGTCCACTTCAGCATCGTTTGTTCTTACGCGAAACAGAAAACCGACGGACAAAGACGACAAACCGTAGAAATCGGACAGCGGAAGTTGAAGGATGGCTCAGAGTAAATAAGTTTGCTATTccaggaatttattgagggctGTTCAATCGCAGTTGTTTTCCCTGATTGGCTATTTTAGGTTTCGGCGAACCTGTTTCTGATTTAATTTGCCTGGGCTTTCGCCGGAGAAATGAGCTCCGTCGTGCCGGCGGGGTCCGTGGCGTGTTCTCGCAGGCGGCTTCAGTCAGAGAAGTTGCAGTGTTTTGTGCCCGGGTCAGAGAAACATGAGGGACATGAACGTGTTTGAGCGCTCCTCCGTGCTCGCCGCGGAGATGATGGAGGTCTTTGATCGGACTCCCACGGAAAAAGAGCTCGTCTCTCAGTCCAAGGAGCTCTGCAGAGATTTCATTCACTCCAGAATCGCGAGGGAAGGACTGAGTTGGTCAAAAGTCGGGTTTGATCTGCCCGAGCCACGCGGAGCTCTTGTAGATGTATCTGTGGTGCTGCTAAAACTGGGTGATGAACTGGAGTGTATGTGCCCGTATGTGTATCGTAACGTCGCAAAGCAGCTGAacatcggcgtagcagtggaGGCTGTGGTGTCAGATGCGTTTCTGTCCGTAGCAACAGAGATCCTAGTCATGGGGATCACATGGGGCAAAGTGGTGGCCATCTATGCGGTAGCAGCCGGGCTGGCGGTTGACTGTGCGCGTCAGGGCCATCCGGTCATGGTGCACACTATAGTGGACAGTCTGGGAGAGTTTGTGCGTAGAAACCTGGTCCCATGGCTCAAAAAGAGAGGAGGATGGggggacattttaaaatgtgtggtGAACATGGACTCTAGAGCTCGTGCCCACTGGTTATCAACAGCTGTGTTCACGTGGAGGCAATTCCTAAAGACCATGTACATCTACCTGACGAAGTAACCTTGTGCAGGAAATCATCCTGTTGACTGAGAACCGAATCTTTTCCTCCCAGGACTATTTGAATGGACTATTGTACTGTTTTTGGAGCAAACAGCCCCTCACAAAGATCACAGCACGTCAGCCAGGCTTAACCGCACCTTAATCCTCTTTTACCtttcattatttctttaaaatacactaACCATAGACTGAAACGAATACTATGAGCTGACATCGTGGGGTTGGCACTGTGAGGGAATATGTACTACATTCATTGCTGGAGCTACAATGTCTGTCTTCCTTTAGTATAAACTGACCCAGAAATACGGTATGTGGGTATCTGAGCTTCTTTTGTGCTGACACACTGCGTGGATTCGTTCCACCGTGATTTTATACTGAGTATCTGTGGTGATAagtgtaacattttaatgtttgacaatcttcagagttttatttttaaaataattacggAAAATGGAGTGTCACTTTGCACTTTCAGTTGTACAgtttgtgtggtgtgtgtgtgtgaaacactgTTGTCACCAGCTGTACacgtctttaaaataaagattttaatgcGTGAACTAAGA

Function

symbol description
bokb Predicted to enable protein heterodimerization activity and protein homodimerization activity. Predicted to be involved in extrinsic apoptotic signaling pathway in absence of ligand and intrinsic apoptotic signaling pathway in response to DNA damage. Predicted to act upstream of or within apoptotic process and regulation of apoptotic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrial outer membrane. Is expressed in several structures, including chordo neural hinge; nervous system; neural tube; ovary; and solid lens vesicle. Orthologous to human BOK (BCL2 family apoptosis regulator BOK).

NR:

description
PREDICTED: bcl-2-related ovarian killer protein homolog B-like

GO:

id name namespace
GO:0043065 positive regulation of apoptotic process biological_process
GO:0097192 extrinsic apoptotic signaling pathway in absence of ligand biological_process
GO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage biological_process
GO:0005741 mitochondrial outer membrane cellular_component
GO:0042803 protein homodimerization activity molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG:

id description
K20017 BUFFY; Bcl-2 family protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253584.1 True 1856 mRNA 0.46 4 10049401 10053443

Neighbor

gene id symbol gene type direction distance location
zgc:161973 LOC107722582,LOC107693721,LOC107718160,LOC107585707 coding downstream 3521 10040661 ~ 10045880 (-)
kif1ab kif1ab,LOC107722550,LOC107691514,LOC107693723,LOC108432503,LOC107589853 coding downstream 16103 10008346 ~ 10033298 (-)
espnlb espnlb,LOC107691737,LOC107722507,LOC107718163,LOC107580328,LOC107589891 coding downstream 41812 9997644 ~ 10007589 (-)
rab6bb rab6bb,rab6b,LOC107589854,LOC107693724,LOC107718122,LOC108432504 coding downstream 53781 9989129 ~ 9995620 (-)
aire LOC107589913,LOC107691773,LOC107718121,LOC107579220 coding downstream 61946 9981985 ~ 9987455 (-)
sept2 sept2,LOC107722571,LOC107693718 coding upstream 9320 10062763 ~ 10071463 (-)
lrrc8da lrrc8d,lrrc8da,LOC107722644,LOC107585666,LOC107718115,LOC107691468,LOC107589846,LOC107722505 coding upstream 54688 10108131 ~ 10113585 (-)
hs2st1a hs2st1a,hs2st1,LOC107718112,LOC107589844,LOC107691454,LOC107722647,LOC107585633,LOC106598897 coding upstream 93139 10146582 ~ 10158021 (-)
tox tox,LOC107718108,LOC107722616,LOC107585594 coding upstream 169888 10223331 ~ 11062973 (-)
trnak-cuu_1 NA coding upstream 336108 10389551 ~ 10389623 (-)
G10812 NA non-coding downstream 2028 10046818 ~ 10047373 (-)
G10773 NA non-coding downstream 121564 9926105 ~ 9927837 (-)
G10708 NA non-coding downstream 300661 9748387 ~ 9748740 (-)
G10621 NA non-coding downstream 443206 9605638 ~ 9606195 (-)
G10562 NA non-coding downstream 588317 9457163 ~ 9461084 (-)
G10869 selenof,sep15,LOC107693704,LOC107586130 non-coding upstream 105135 10158578 ~ 10160064 (-)
G10987 NA non-coding upstream 172775 10226218 ~ 10226856 (-)
G11057 NA non-coding upstream 613034 10666477 ~ 10666712 (-)
G11064 rpp40,LOC107722637,LOC107688445,LOC107689405 non-coding upstream 614199 10667642 ~ 10668967 (-)
G11063 rpp40,LOC107688445,LOC107722637,LOC107689405 non-coding upstream 615619 10669062 ~ 10669414 (-)
si:ch211-267e7.3 si:ch211-267e7.3,LOC107722581,LOC107594654,LOC107718186,LOC107589917,LOC107677774,LOC107693699 other downstream 430928 9606323 ~ 9618473 (-)
plppr5a plppr5,plppr5a,LOC107722655,LOC107693754,LOC107677753,LOC107589876,LOC108441579,LOC107718169 other downstream 529620 9491563 ~ 9519781 (-)
abca4b abca4,abca4b,LOC107564534,LOC107680047,LOC107745690 other downstream 839360 9182056 ~ 9210041 (-)
zfyve9a LOC107700554,LOC107563295,LOC107677579,LOC107553256,LOC107732202 other downstream 1621497 8403327 ~ 8427904 (-)
G10213 NA other downstream 1941613 8106856 ~ 8107788 (-)
hfm1 hfm1,LOC107722645,LOC107586144 other upstream 26739 10080182 ~ 10095857 (-)
pkn2a pkn2,LOC107693716,LOC107585639,LOC107722607,LOC107718113,LOC107691687 other upstream 66530 10119973 ~ 10139585 (-)
lmo4 LOC107722609,LOC107693715,LOC107691760,LOC107589910 other upstream 87492 10140935 ~ 10143709 (-)
ca8 ca8,LOC107693711,LOC107585586,LOC107691405,LOC107589840,LOC107722503,LOC102778484 other upstream 260590 10314033 ~ 10320403 (-)
G11011 chd7,LOC107585562,LOC107722533,LOC107688517,LOC107718105,LOC107589837,LOC107689390 other upstream 322620 10376063 ~ 10378211 (-)

Expression


Co-expression Network