LOC122355453


Basic Information

Item Value
gene id LOC122355453
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 20543826 ~ 20547503 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253768.1
CAGAGGCAATTATAGTGCACACGTCTCTTTTAACATAAACAAGGAAATATAACTATTCTGTGCATCTGTTCATCTGAGTCTACGCACAGTAAAATGGCAGAATCCAGCATTTCAGTGGCTCAGGATCAGTTCAGTTGTTCAATTTGTCTGGATCTACTGAAGGAAGCAGTGACCATCCCCTGTGGACACAGTTACTGTATGAGCTGTATTTCAGGTTACTGGGATCAGGATGATCAGAAGACAGTCTGCAGCTGCCCTCAGTGCAGACAGACCTTCAATCCGAGACCTGCTTTAGGTAAAAACACCATGCTGGCTGAAGTGGTGGAGAAACTCAAGAAGACAAACTTAGAAGCCGCTCATCCTGCTCAATGCTACGCTGAACCTGGAGATGTGAAGTGTGACGTCTGTACTGGGAGAAAATATAAAGCCATGAAGTCCTGCCTGGTGTGTCTGGAGTCTTATTGCCAAACTCATTTTGAGCGTCATGAAGAATTTCGCTCTGGCAAGCAACACAAAGTGACAGATGCCATTGGAGAATTAAAAGAGATGATCTGCCCTCATCATGATAAACTGCTAGAGATTTTCTGTCGTACTGACCAGACctgtatatgttatatgtgtATGTTGGATGAACACAAAAGCCACGACACTGTATCAGCTGCAACAGAGAGAACTGAGAAACAGAAACACTTGgtagaaacacagaaaaaattCCAGCAGAGAATCCAGGAGCTTGAGGAGCTGAGAGAGACTGTAGAGTCTTACAAGCGCTCTGCACAGACAGCAGTGGAGGACAGTGAGAGGATCTTTACTGAGCTGATCCTCTCCATTGAGAGAAGTCGGTCTGAGGTGACACAGATGATCAGAGATCAAGAGAAGGCTGCAGTGAGTCAAGTTGAAGGACAACTGAAGGGACTGGAGCAGGAGATTGAAGATCTAAGGAGGAGAGATGTTGAGCTGGAGAAGctttcacacacagacaatCACATCCATTTCCTCCAGAGTTTCCAATCTCTCTCTGTTCCTCCTGGGTTTACAGAGTCACCAAAACTCAGTGTCAGTTCTCTTCCCTCTTTTGATGATGTTAGTAAATCTGTGTGTGATCTAAGAGAGAAACTGGTGAATTTATGCAGAGAGGAGATAATAAAGATTTCTAATCGAggcaaaaaaacagacaaacctgCTTCCTCAGTGAGACACAACCAGAAAACTACTCCAGAATATAAGAGCAGGCAGGAGTTCCTAAAATATTTCCAGCGATTCACTCTGGACCCAGACACAGCATTTAAACATCTTTATCTGTCTGAAGGGAACAGAGTGCTAACTTTCGGCCATATACAGCCATATCCTAATCATCCAGAAAGATTTGATGCATACGCTCAGGcgttgtgtagagagagtgtaaGTGGACGCTCTTACTGGGAGGTTGGATGGGCTGGATATAGATGGCTGAGTATAGGAGTGTCATATAAGAGCATTGATAGAAAGGGGGACAGTAATGCAGTTAAACTTGGAAGTAATAGTCATTCCTGGTCTATGATGTGCTTTCTTGGCAACTGTAATTTTTGGCACAATGGTGGAATAATTTCGCTTCCTCCAATCCCCTGGCCCTCTAGaataggagtgtatgtggatcaCGGTGCAGGAACTCTGTCTTTCTACCATGTCACTAACAAAATGAACCTCATACACAGAGTCCACACCACATTCACTCAGCCTCTCTATCCTGCGTTCTGGATAGATCCTGGAGTAGGTGTGAGACTGCTTGATGCTTAATAATTTTAGGGTTTGAGTTTCAGATTAATATAATGGTTATAAAATAGGAATAGGAATAACAGGCCGTCCAAACTGAGTCCTGGAGGCCCTGTgccctgcagagttcagctccaaccctaTACACAAGCACACCTGAATTAGTGAATTAAGCTCCTACTATGCATGTTAGAAACTTCCATGCTGGTTTGTTAAGGCAAGTTCGAGCTAAACTCTGCTGGACACCAGCCTGCCTGGACCAAGTTTGGACAGCCCTGACCTAAAATAATACACTATGATTGTGTAAGGTTGATCAttcttttacattatttgttgATAGTTATTTAGCTGGTTAAATATTGGCCAATATATCCTATCTGATAGACAAAAATACTTACGTAAAGACATAATCGtgaacatgcatttaataaaaaacaaatgtattctgtatttaaaatgcagatgACTGCTGATTACTATTGTTTCCGAACGCTGTATTTGTATCTGTATTTTCATGTGATCTTTTTGTGCTGACACTTGATTTCAGTCAAAGCCAAACGCTTTCAAAACAATTATAGACCAAAAGAGTTTGCAAAAGAATCAAATAGTGAAAAAAACATGGCTGACATGTTGACCTTTTTTAGTGCCAAGCTAACTACAGGCTTGTTTGAGATGTGCCTTACCTCGTCTGAAATGTAGGCAAGAGTACGCAGCTGCAGTGAGGGCAGgacatttgtacttttttgtaatttatttgaataaataatcgCAATGAAatcaggtaaaaaaataaaacattttagaagagAATGCAGCATCACAGTTGTCTGAACCAATGAGCATTAAGCTTGTGTCACCAGTCAGTCATTACCCAGCATGCTTTTGGTCAGCACAGTCGGTGATGAAGTATCTTTATATCCTCATATGCtaattgtgttgtgtttttgttttttgtttttttttcatttttcttcatttataatcatttattta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253768.1 True 2745 mRNA 0.41 5 20543826 20547503

Neighbor

gene id symbol gene type direction distance location
LOC122358486 LOC107602635,LOC107566996,LOC107721759 coding upstream 4272 20537537 ~ 20539554 (+)
vcpip1 vcpip1,LOC107567007,LOC107721719,LOC107659314,LOC107690121,LOC107749097,LOC107602633 coding upstream 14820 20519909 ~ 20529006 (+)
odf3l2a zgc:110183,LOC107749223,LOC107602632,LOC107721708,LOC107588920,LOC107690329,LOC107678684 coding upstream 108404 20433469 ~ 20435422 (+)
acvr1l acvr1l,LOC107678695,LOC107749086,LOC107602619,LOC107721710,LOC107690001 coding upstream 240052 20294585 ~ 20303774 (+)
epha4b epha4b,LOC107694655,LOC107668971,LOC108428906,LOC108268054,LOC103372263 coding upstream 797931 19644610 ~ 19745895 (+)
LOC122355454 cyp7b1,LOC107749124,LOC107659553,LOC107602637,LOC107566988,LOC107690180,LOC107721742 coding downstream 2440 20549943 ~ 20555995 (+)
tmeff1a LOC107749138,LOC107602613,LOC107659611 coding downstream 15411 20562914 ~ 20567961 (+)
cavin4a murca,LOC107749140,LOC107602614,LOC107659646,LOC107690354,LOC107721748,LOC108428327 coding downstream 20954 20568457 ~ 20571921 (+)
ift57 ift57,LOC107659588,LOC107602615,LOC107566989,LOC107690362 coding downstream 25244 20572747 ~ 20577649 (+)
tmem71 tmem71,si:ch211-235o23.1,LOC107690185,LOC107749144,LOC107659711,LOC107566994 coding downstream 30923 20578426 ~ 20588575 (+)
G13896 NA non-coding upstream 11088 20532212 ~ 20532738 (+)
G13880 NA non-coding upstream 40487 20481017 ~ 20503339 (+)
G13851 LOC107721736 non-coding upstream 43876 20477963 ~ 20499950 (+)
G13863 NA non-coding downstream 44215 20591718 ~ 20595093 (+)
G13909 gtpbp4,LOC107690210,LOC107721733,LOC107567003 non-coding downstream 68655 20616158 ~ 20617660 (+)
G13964 NA non-coding downstream 352061 20899564 ~ 20946266 (+)
G13980 NA non-coding downstream 408432 20955935 ~ 20957136 (+)
G13976 NA non-coding downstream 414190 20961693 ~ 20966228 (+)
LOC122326305 LOC107749119,LOC107602627,LOC107566983,LOC107690079,LOC107721763,LOC107721764,LOC107678697 other upstream 35435 20493174 ~ 20508391 (+)
G13882 LOC107749119,LOC107602627,LOC107721764,LOC107659530,LOC107721763 other upstream 58608 20481664 ~ 20485218 (+)
gbp2 LOC107678697,LOC107602627,LOC107690079,LOC107721763 other upstream 70302 20467268 ~ 20473524 (+)
crlf1a crlf1a,LOC107602622,LOC107678692,LOC107588877,LOC107690059 other upstream 114478 20416203 ~ 20429348 (+)
rem2 LOC107583115,LOC107567555,LOC107668956,LOC107738122,LOC107706340 other upstream 2381684 18138644 ~ 18162142 (+)
G13998 LOC107659744,LOC107749160,LOC107563810,LOC107563823 other downstream 616439 21163942 ~ 21164822 (+)
G14211 NA other downstream 759904 21307407 ~ 21361708 (+)
LOC122354659 LOC107749134,LOC107659944,LOC107600069,LOC107692888,LOC107557869,LOC107721709,LOC101885494 other downstream 933631 21481134 ~ 21482642 (+)
ece2a ece2a,LOC107660439,LOC107600061,LOC107557862 other downstream 985742 21533245 ~ 21621097 (+)
ccl20a.3 LOC107749165,LOC107660500,LOC107557866 other downstream 1167180 21714683 ~ 21716290 (+)

Expression


Co-expression Network