plppr3a (plppr3a,LOC107584910,LOC107729344,LOC107688501,LOC107732518,LOC107674011,LOC107602549)


Basic Information

Item Value
gene id plppr3a
gene name plppr3a,LOC107584910,LOC107729344,LOC107688501,LOC107732518,LOC107674011,LOC107602549
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 12156094 ~ 12168917 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254130.1
TATATGGCCTATTTATGGAAAGATATTTacaaatatctttatggaacatgatattTACGTAATATCCTAAccaaaaaaaatggcataatagaaaaatgtataattttgaacCATACAATACAGTGTTGGACATTGCTGCAAAAATACATGTGTTTTCTGGCATTTATCAAGCTGAAACAGCATTTACACACAGTTCtcctgtatatatttattggcTGAATGCATTGCCTATAATTCGATTTTGCATTTTGCCATTTTCATAATACGAGATATGAGTAGGCTATGTTCTGTCATGTTTTAATTCTGTATGCTGTATCTTCCTTATAAAGCTAAACAAAATATCACGAATGCTGCAGAAAACGCAAAACAACCCCAGACCAGGATCCCTCGCGGTCACCCTATGGTTCTAGGACGAAGCGAGGTTCACTCGAGCGAAGAGCGGCGAGGAGcgagcgtgcgtgcgtgcgtgcgtgcgtccGCGATGACGCGCTGACATGTTCTCACCGGAGGCGTGCTGCGCCATGTGCTGCTGTCCgctcctgacgggaaacatacCTAGACACAAAGGAGCGCGTGGTCCTCAGGCTGCCCCACCCCAGACAAATAAGCAAAGAGCATGAGCGCGCTTATGTGGGTCCACATGAGACGTGTGCTCCGTTAAGAACGTCTCGGCGTCTAAAAGTACGGATAACGTCCGGCGTGATTGAGCGGTCGACGCGCACGCACAAAGAGACGCGCGAATTAACCCTTGCGGTCGTGAACGGGACTCCCTCGCAATCTGTCGCGTCTCTACGTCTCTTTTGTTACACGTTACGGGCTGACGGCTGGAAATAAGCGGGGGTTAAGACGCTCTCCGCGTGTTTGTGTTAAAAAGTGGACCGCCTCCTCCCTCATTTCTGTCCCCTCCCTCAAGAAACCCCCTTCCAGTAGCCTTTTGTGTTCACGGTGCCCTACACAGTCACTGCATTCCCGTTTCGTTTACTATCCGCTCATCCGAGGGCTCCGCGCTCGAGATCTCCGCGAGAAAGTGGCCCGATCGCGAGGAAATTACTCCCATCTACTTCTGGGACTTCGCGACGTTGAGGAAATACGAGCGGAGCCTCCAGCCCCATTCATACTTTTATCCGTTCACTCACCGTCAGCGGACAGGGGGAAGtgaacacaaagatattttgtacaagCGTGAAATGGATTAAGTCGCATTGAGGAAAGCTGGAGCACCACAGACGAACCAAGCGACGGCGAAGGGGTCGGAGGGAGTCGATGAATTTCCAACATCAACGAGAAAGAGATTTTACTCGGCCAAATGCCAAAATGATGTCTCCAAAAGACAAGCCCAAGAAGAAGCCTCCCAAAGACAGCATGACCCTGCTGCCATGTTTCTACTTTGTAGAGCTGCCAATTGTGGCATCCTCCATGATCTCTCTTTACTTCTTGGAGCTGACAGACATATTACAGCCAGCCAAAGTTGGGTTCCGTTGCCATGACCGCACACTGAGCATGCCCTATGTGGAAACAGGAGACGAGCTCATCCCTCTGCTCATGCTGCTCAGCCTGGCCTTCGCTGGCCCGGCAGCGTCTATCATGCTGGGTGAAGCCTTGATGTACTGCATGCAGTCCAAACTGAAGATTCGCTCTGGGACAGAAGGGAGTATAAATGCAGGAGGCTGCAACTTCAACTCCTTCTTACGCAGAACAGTGCGCTTTGTGGGTGTTCATGTGTTTGGGCTGTGCGCCACTGCATTGGTGACTGACGTTATCCAGCTGGCCACTGGCTATCACGCTCCCTTCTTCCTGACTGTGTGCAAACCCAACTACACACTGCCGGGTGTGGCCTGCGATAAAAACCCCTACATAACCCAGGACATCTGCTCAGGCCGGGACCAGTATGCCATCCTGTCAGCAAGGAAAACTTTCCCCTCCCAACACGCCACTCTGTCTGGCTTTGCAGCTGTCTACATCTCGATGTACTTCAATGCCACCATATCAGACCGTACTAAGCTACTGAAGCCCGTGCTGGTGTTTGCGTTTGCCATAGCAGCAGCCCTGGCGAGCTTGACCCAAATCACCCAGTATCGGAGCCACCCGATTGACGTCTACGTGGGATTTGTGATAGGGGCTGGCATCGCTGTTTATCTTGCACTATATGCAGTGGGGAACTTTAGGTCCAATGAAGAGTCCTACCACAGGCCTCTGAAGCAGCCCCCTCCTCCACAAAAAGATCCTCTAAGAGAACTGACACAGCGTGGACATGATTCAGTGTACCAAAAGGCCCATGCTTCTGAGAGCAACGATGAGCTGTCTGCCCCGCCACATGTTGCTGGCCTGAACCGCAAGGTGCGTCGTGAGAAGGCCTCAATGGGCAGTCTGAAGAGGGCTAGTGCAGATGTTGAGCTCCTGGCTCCTCGCAGCCCAATGGGGAAGGAGACCATGGTGACCTTCAGTAACACACTGCCCCGTGCTAACACCAATGCTATGGAAGAGCCTGCTCAGCGTCACATGACCTTCCATGTGCCAATGGACTCTCAGCGTTCCAAACAGCTGGTGTCCGAATGGAAGCAGAAATCAATGGAGATGCGCAGTCTCAGCTTGagggatgaggaagaggaggaaggaaCAACTGCAGAGGGAGTTGAAGGAATTGAAGGAGAAGCTCCAGAGGATCTGGGCATGCCGTCCTCTCTTTATCCTACCGTGCAAGCCAATAGGGGAGCGACGGCGACAGCAGGAGCTAGGGCGATGATGCCTCAGAGGCCCGGTGCCCCGCAGTTGGTTCATATCCCAGAGGAAGCCACAAGACCACCACCAGTGTCACCTAAAAGCGCCATCACACGGGCAAAATGGTTGTCCATGACGGAGAAAGGAGGTCCAGTGCCAGCCGCCACACCAGAACCTCCACGACTACCCAACCAGCCGCGGGTTATGCAGGTGATTGCAATGTCTAAGCAACATGGTCCAGGTAGCATCTCCACACCAAAGTCCTCAGAGACCGCCTCATCCTGTGCCACCTCCAGCACTGGCTCAGAGTCTCCATACTACCGCATCCCATCGGAGCAAGACAGGAGCAGCATTGTCACAGTAGATGCTCACGCTCCTCATCACCCAGTGGTTCGTCTTTCTTCAGGTAACGGAAACACGTGGGATTGGAGGAGCACCTCCAATGGCAGCACTGAAGTCCATGAGACAAGCCGGACGCTCCCTAGACAGGAATGTGTCCGTGATTATCGTCCCCTGAAAACAGACTCCCTCTGCTCTTCTATAAGTGATCCTGATCCTGGGATCCTTCCTCCACCACCTCATCCTGACCTGCTTCTTGACAGCAGTCTAAGTCGAGATTCCTCGCTTCATCGTAACTCCTCAATCTCAGCTAAAGACTGGGAGCCTGGGCAGCCTCACCCTGAGCCGGACCACTTCTTTAAGAACTTGCAAACAAACAGGCCATTTAAAGACTAAAGATGTTACTGTAGGCCAAAGCAGAGACGCAGCAGACTTCTTTTGGGTGGAACCCAATGTGAATAATTGTGTTTTCGGTGGATGGCGAGAGAAGACAGCCTTTTTGGTTATCTCACATGGAGCATCTGGGGTGGATTAGTGCGGTGGAGCACCAGAAGGATCACACAGACTTGAGGAGGCTGCTGAGTATACATGCTCAATCTGTGAGGAATGATGACCCACAAAcctcaaaaaatgaaatacaaaatcaaGTTGTAATTAATGCATTACGTCTTTCTGTTCTTTCCAGAAAACTTTGCCACTTTCAAGAAGCTACGTTTTTATGAGTAAAGACATAACAACCAACCATATTTACATTTgaggtttacattttaattcatacaCAAAGACTTATGTTGTGTTGTACAAGAAGTTATGTTTTAGTTCTTTATTGATTCAGACTCATTTGGGGACAGTTTTATCCTGGGAATATGGACAGGTAAGCAGTCCCATGACTTTGCTGTGTATGGAATCAGTTTTAAGTAGGCCTAGTCACGTTCTCCTTTTTATACTAAAATATGAAGTACTCTTGCTTGTTTGTACgtgttgcatgtgtgtttatttatgtcttCTTGACTTTGGATGGACTGTTATATATCAGCAGGGATGGTCTCTTTCATTTTGCTGCCCTAATGTTaaggtttttgtaacaaactttgaaaaataaaattgtaataatacta

Function

symbol description
plppr3a Predicted to enable lipid phosphatase activity and phosphatidate phosphatase activity. Predicted to be involved in phospholipid dephosphorylation; phospholipid metabolic process; and signal transduction. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in central nervous system. Orthologous to human PLPPR3 (phospholipid phosphatase related 3).

NR:

description
PREDICTED: lipid phosphate phosphatase-related protein type 3-like

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K19582 LPPR3_4; lipid phosphate phosphatase-related protein type 3/4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254130.1 True 4175 mRNA 0.49 8 12156094 12168917

Neighbor

gene id symbol gene type direction distance location
grin3ba LOC107722525,LOC107586537,LOC107688545,LOC107674402,LOC107602513,LOC107732504 coding upstream 5925 12111956 ~ 12150169 (+)
slc7a14a LOC107584921,LOC107688500,LOC107722625,LOC107680258,LOC107550597,LOC107732514,LOC108442332 coding upstream 66168 12068261 ~ 12089926 (+)
eif5a2 eif5a2,LOC107584931,LOC107722594,LOC107688499,LOC107680233,LOC108442333,LOC103022137,LOC105908511 coding upstream 116619 12034994 ~ 12039475 (+)
slc2a2 slc2a2,LOC107550598,LOC107680265,LOC107722632,LOC107586013 coding upstream 123012 12025276 ~ 12033082 (+)
tnika tnika,LOC107688496,LOC107722539,LOC107680235 coding upstream 131196 11946162 ~ 12024898 (+)
palm1b LOC107729325,LOC107688502,LOC107584893,LOC107674018,LOC107732516 coding downstream 7311 12176228 ~ 12189936 (+)
ptbp1a ptbp1a,LOC107602545,LOC107732511,LOC107674042,LOC107584874 coding downstream 22312 12191229 ~ 12201145 (+)
efna2a efna2a,LOC107688504,LOC107729478,LOC107584867,LOC107602547,LOC107732508,LOC107674409 coding downstream 35488 12204405 ~ 12256887 (+)
hectd3 hectd3,LOC107688506,LOC107674075 coding downstream 101970 12270887 ~ 12278067 (+)
rps8a rps8a,rps8,LOC107674081,LOC107688507,LOC107602544 coding downstream 109815 12278732 ~ 12281207 (+)
G11419 NA non-coding upstream 54968 12100875 ~ 12101126 (+)
G11207 LOC107688485,LOC107585026,LOC107550612,LOC107709892,LOC107722651 non-coding upstream 537231 11614241 ~ 11618863 (+)
LOC122328936 NA non-coding upstream 542528 11609251 ~ 11613566 (+)
G11191 NA non-coding upstream 699230 11456326 ~ 11456864 (+)
G11190 NA non-coding upstream 700686 11454258 ~ 11455408 (+)
G11505 NA non-coding downstream 168750 12337667 ~ 12339049 (+)
G11590 NA non-coding downstream 376436 12545353 ~ 12545592 (+)
G11593 NA non-coding downstream 445458 12614375 ~ 12614596 (+)
G11595 dsela,LOC107679326,LOC107584692,LOC107728919,LOC107714854,LOC107674195 non-coding downstream 447078 12615995 ~ 12621414 (+)
G11618 NA non-coding downstream 528169 12697086 ~ 12697294 (+)
pld1a pld1a,LOC107688495,LOC107550602,LOC107680234,LOC107722545,LOC108442335 other upstream 218504 11908073 ~ 11937590 (+)
mast3a LOC107722547,LOC107688474,LOC107680242,LOC107550619,LOC107709878,LOC107586070 other upstream 648390 11482104 ~ 11507704 (+)
rps28 NA other upstream 711523 11422090 ~ 11444571 (+)
mrpl34 LOC107688463,LOC107585198,LOC107722555,LOC107680228 other upstream 814983 11339735 ~ 11341111 (+)
fitm1l LOC107589905,LOC107718171,LOC107585187,LOC107688462,LOC107722554 other upstream 817625 11303678 ~ 11338469 (+)
LOC122358236 NA other downstream 454906 12623823 ~ 12626387 (+)
rnf152 rnf152,LOC107729101,LOC107679332,LOC107567413,LOC107674343,LOC107714840,LOC107584540 other downstream 699012 12867929 ~ 12874008 (+)
G11854 jph1b,jph1,LOC107584332,LOC107550709,LOC107746914,LOC107732545,LOC107664083,LOC107686034,LOC107740042 other downstream 2006447 14175364 ~ 14179615 (+)
plxdc2a LOC107686089,LOC107713976,LOC107751571 other downstream 2577190 14746107 ~ 14753161 (+)
ackr4a LOC107664061,LOC107751559,LOC107556724,LOC107751558,LOC107751560,LOC107713978,LOC107586293 other downstream 2607405 14776322 ~ 14782977 (+)

Expression


Co-expression Network