LOC122355713 (LOC107578657,LOC107730436,LOC107692891,LOC107692896)


Basic Information

Item Value
gene id LOC122355713
gene name LOC107578657,LOC107730436,LOC107692891,LOC107692896
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 21702091 ~ 21704894 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254267.1
TTGAAAGGAACTTTATTGTGTCAAAATTGTTCgattataatgaaaatgacGCTACAAGTGAGGAACAGTCTTACAGACACACCCCTTCTGTAAAGTACGGCCTCCTCCGTGCTGTATAAATAATCATCCAAAAGATTTGAAGGATGCAGAGGCTCTTCTACTGAGGACCTTCAATCTGAGATTTTGCCATGGGTGCCACGAGACTCTGCTTCCTGCTCTTCTGCCTCTTCCTGGTGAGCGTCTCTTCTTTGAGAAAACTTAAAGATATTCATGacttaaaaaacattacatatgcCAGGTCTGCGCCACGTCATGGACTCCAATTATTGTTCTGGTTTGCCCAAAAAGTTGTGACCGTTGATCAGAGCAACATTCTCATCCTCGATTCCAATTTCGATCCTAGTAGAGGTGACTTTGGATTCCACCATTACAGCAACAGAGAAGTCATTCTCCCCTCATTGAGCTCCTGGCAGAGTTACTATTCGGTTGGCAATTTAAAATCTCCTGGAGCCAAAGCACTGCCAGCCTATGTGCAGAAGTATTACAGAAACACCAATGTGCCGGAAAGAAACATGGACAGGCTCATTATctctgtgaaacaaaacaagccAAACAAGATACTCGGCGTGTTTATAACGGCGTACGACCTTCACAAGAACGACTTTAATTATGAGAACACTTATGAGATCGATCCTGCTCTGCTCTTGCAAATTGGGGACCCTTATAACTGCACTGTTGATGAGAGCAACATACCACGTAATACAGAAGACACAGAATATGACAGATGCCTTGAGTTTCTGAAAGAGATGGGATACAGCAGCGATGACTGCAAACACAGTCATATCAGCCGCAGAAAGAAACGCTCGCCCTATttgcaatgcaatgcatatGAAGGAGTTAAACTAGAGATAAAAGCAACTACAGGAGGTTTCGCGAAACTCCTGTGGGAGATGCCTGCTAAAATTATGGAAAATTCCAAATATGTATACATCGAAATCTGCCAAAACACTCGTTCCAGTGAAACTAATGAAGTTCATACGGAGGTCAGGAAACAGCTGAATATTTACGAACCGTCTGGGGTTATAGATACTTCTGTTTCCACGAATGATGGTCTCCAACCTCGACTGCGACTGTACCCATCGCTTTTTGATTTTCAGTTTACTAATCCATATATTTGGTATGGGCCAGAGTTTGACGGAGCTAATAAAGTGATCCCCGCTAGAATAAAGGGGTTTGATGCTAGTCTGCAGCTCTGCGCTGAAGACGGAAAAGCCAGCGCTCGACTCTACATCAAGAAAACCTTCAGCGACtggaaaaatgttcttttctacTCATGGGTGGGCTTCTATAAAAATTCACAAGACAAAAACGATGACTATTCAACGTATCAGTATGCTGATAGGTTTGCTAAGGTCGAAAACTCTATCACACACAATTATGATATTTACCAGTATAATACCAGTTTAGCTATTGTTCCTGGAGTTCAAATCCGTTTTCTGTTGgacaaaaaatatgacaaagtTTTAGCACAAACTACGCCCTGGGAGGGTGTTGAAGCAGTGACAATATTACCATCAGATTGTGGCACACCGAGTCCTAGTCTTCAGCCTAAAATCACATCAAACATGCCAGAATTCTTTTATGGACCAGAGTATGATAATATCGGTCTGCAGCTATTCACTGAGGATGGTAATGCTTGTGCTCGACTTTATGTTAAGAAGACCTTCGCAGATTGGAAAGATACTTTCTACTACTCATGGGTGGGATTCTACACTAGTTCACAAGACCAAAATAATGGCTATTACACGTATAGCTATGTTGTGAAGTTTGAAAAGATGGCGGATGGTAATgataattatgatatttatcaATACAAATCCAAACTGGCTATTGCGCCTGGAGTACAGATACGTTTCCTGAAAGACAAAAGTTCTGATAACGTATTAATTAAAACTGAGCCCTGGAAGAACGGTAAATAAATCAGCTTTTGGCAATTCATAAAAGAAAGTGAGGTGATGTAACGATAACAGTAAAAattcatttgaacttttttaacattagtgAGTCTTTACATTCATCAACATCTGTAACAAACTGCTGTCCGCGTGCTGACATGAATAACCATTAACCGACAGTTCTAGCATGCACTGAATTTAATTGTACCGCATAATATGCAATAGCCTTGCTCTGTTTGTTGTATTATCTCACCCACAATCTCTATTAAAATGCATCTGATGAAAGTGA
>XM_043254274.1
AAAGGAACTTTATTGTGTCAAAATTGTTCgattataatgaaaatgacGCTACAAGTGAGGAACAGTCTTACAGACACACCCCTTCTGTAAAGTACGGCCTCCTCCGTGCTGTATAAATAATCATCCAAAAGATTTGAAGGATGCAGAGGCTCTTCTACTGAGGACCTTCAATCTGAGATTTTGCCATGGGTGCCACGAGACTCTGCTTCCTGCTCTTCTGCCTCTTCCTGGTGAGCGTCTCTTCTTTGAGAAAACTTAAAGATATTCATGacttaaaaaacattacatatgcCAGGTCTGCGCCACGTCATGGACTCCAATTATTGTTCTGGTTTGCCCAAAAAGTTGTGACCGTTGATCAGAGCAACATTCTCATCCTCGATTCCAATTTCGATCCTAGTAGAGGTGACTTTGGATTCCACCATTACAGCAACAGAGAAGTCATTCTCCCCTCATTGAGCTCCTGGCAGAGTTACTATTCGGTTGGCAATTTAAAATCTCCTGGAGCCAAAGCACTGCCAGCCTATGTGCAGAAGTATTACAGAAACACCAATGTGCCGGAAAGAAACATGGACAGGCTCATTATctctgtgaaacaaaacaagccAAACAAGATACTCGGCGTGTTTATAACGGCGTACGACCTTCACAAGAACGACTTTAATTATGAGAACACTTATGAGATCGATCCTGCTCTGCTCTTGCAAATTGGGGACCCTTATAACTGCACTGTTGATGAGAGCAACATACCACGTAATACAGAAGACACAGAATATGACAGATGCCTTGAGTTTCTGAAAGAGATGGGATACAGCAGCGATGACTGCAAACACAGTCATATCAGCCGCAGAAAGAAACGCTCGCCCTATttgcaatgcaatgcatatGAAGGAGTTAAACTAGAGATAAAAGCAACTACAGGAGGTTTCGCGAAACTCCTGTGGGAGATGCCTGCTAAAATTATGGAAAATTCCAAATATGTATACATCGAAATCTGCCAAAACACTCGTTCCAGTGAAACTAATGAAGTTCATACGGAGGTCAGGAAACAGCTGAATATTTACGAACCGTCTGGGGTTATAGATACTTCTGTTTCCACGAATGATGGTCTCCAACCTCGACTGCGACTGTACCCATCGCTTTTTGATTTTCAGTTTACTAATCCATATATTTGGTATGGGCCAGAGTTTGACGGAGCTAATAAAGTGATCCCCGCTAGAATAAAGGGGTTTGATGCTAGTCTGCAGCTCTGCGCTGAAGACGGAAAAGCCAGCGCTCGACTCTACATCAAGAAAACCTTCAGCGACtggaaaaatgttcttttctacTCATGGGTGGGATTCTACACTAGTTCACAAGACCAAAATAATGGCTATTACACGTATAGCTATGTTGTGAAGTTTGAAAAGATGGCGGATGGTAATgataattatgatatttatcaATACAAATCCAAACTGGCTATTGCGCCTGGAGTACAGATACGTTTCCTGAAAGACAAAAGTTCTGATAACGTATTAATTAAAACTGAGCCCTGGAAGAACGGTAAATAAATCAGCTTTTGGCAATTCATAAAAGAAAGTGAGGTGATGTAACGATAACAGTAAAAattcatttgaacttttttaacattagtgAGTCTTTACATTCATCAACATCTGTAACAAACTGCTGTCCGCGTGCTGACATGAATAACCATTAACCGACAGTTCTAGCATGCACTGAATTTAATTGTACCGCATAATATGCAATAGCCTTGCTCTGTTTGTTGTATTATCTCACCCACAATCTCTATTAAAATGCATCTGATGAAAGTGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107578657

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254267.1 True 2244 mRNA 0.41 2 21702091 21704894
XM_043254274.1 False 1818 mRNA 0.41 3 21702094 21704894

Neighbor

gene id symbol gene type direction distance location
LOC122328123 LOC107730432,LOC107749146,LOC107600057,LOC107660295,LOC100536708 coding upstream 14520 21682031 ~ 21687571 (+)
chrng chrng,LOC107600056,LOC107749123,LOC107660019,LOC107692884,LOC107557864 coding upstream 20203 21676444 ~ 21681888 (+)
prss56 prss8,LOC107557855,LOC107600103,LOC107749207,LOC107660469,LOC107579557,LOC107692867,LOC105418127,LOC107692866 coding upstream 28491 21652740 ~ 21673600 (+)
alg3 alg3,LOC107557882,LOC107749127,LOC107730451,LOC107660011,LOC107692886 coding upstream 64173 21632030 ~ 21637918 (+)
yeats2 yeats2,LOC107692872,LOC107721785,LOC107749094,LOC107600062,LOC107557852 coding upstream 169807 21504200 ~ 21532284 (+)
camsap2b camsap2b,LOC107749095,LOC107730450,LOC107692873,LOC107660032 coding downstream 49511 21754405 ~ 21793590 (+)
wdr47a wdr47,wdr47a,LOC107749106,LOC107730459,LOC108428282 coding downstream 89794 21794688 ~ 21809332 (+)
LOC122358999 NA coding downstream 110306 21815200 ~ 21819162 (+)
nlrp1 NA coding downstream 113988 21818882 ~ 21827232 (+)
fndc7rs1 NA coding downstream 191782 21896676 ~ 21911669 (+)
G14285 NA non-coding upstream 144693 21556844 ~ 21557398 (+)
G14212 LOC107557873,LOC107721701 non-coding upstream 331592 21365808 ~ 21370499 (+)
G14234 NA non-coding upstream 355990 21342371 ~ 21346101 (+)
G13983 kif5b,LOC108232928,LOC106522897,LOC106906931,LOC103138015,LOC106962517,LOC103479480,LOC101155960 non-coding upstream 533204 21166088 ~ 21168887 (+)
G13995 LOC107749107,LOC107659422,LOC107563825 non-coding upstream 548309 21152103 ~ 21153782 (+)
G14315 NA non-coding downstream 11877 21716771 ~ 21717992 (+)
G14316 NA non-coding downstream 15024 21719918 ~ 21720575 (+)
LOC122359002 NA non-coding downstream 106035 21810929 ~ 21812903 (+)
G14476 NA non-coding downstream 189714 21894608 ~ 21895131 (+)
G14477 NA non-coding downstream 190277 21895171 ~ 21895478 (+)
ece2a ece2a,LOC107660439,LOC107600061,LOC107557862 other upstream 80994 21533245 ~ 21621097 (+)
LOC122354659 LOC107749134,LOC107659944,LOC107600069,LOC107692888,LOC107557869,LOC107721709,LOC101885494 other upstream 219449 21481134 ~ 21482642 (+)
G14211 NA other upstream 340383 21307407 ~ 21361708 (+)
G13998 LOC107659744,LOC107749160,LOC107563810,LOC107563823 other upstream 537269 21163942 ~ 21164822 (+)
LOC122326305 LOC107749119,LOC107602627,LOC107566983,LOC107690079,LOC107721763,LOC107721764,LOC107678697 other upstream 1193700 20493174 ~ 20508391 (+)
ccl20a.3 LOC107749165,LOC107660500,LOC107557866 other downstream 9789 21714683 ~ 21716290 (+)
LOC122327294 aknad1,LOC107749213,LOC107660326,LOC107730428,LOC107671582 other downstream 138681 21843575 ~ 21853007 (+)
fndc7a fndc7a,LOC107660526,LOC107671595,LOC107730461,LOC107568736 other downstream 152318 21857212 ~ 21867399 (+)
G14471 NA other downstream 155997 21860891 ~ 21861442 (+)
LOC122327302 LOC107705949,LOC107599389,LOC107675701,LOC107737183,LOC107661566,LOC107586444,LOC107679834,LOC107719545,LOC107717972 other downstream 757022 22461916 ~ 22485655 (+)

Expression


Co-expression Network