LOC122355826 (LOC107746923,LOC107732576,LOC107550699,LOC107686037,LOC107664020)


Basic Information

Item Value
gene id LOC122355826
gene name LOC107746923,LOC107732576,LOC107550699,LOC107686037,LOC107664020
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 14233819 ~ 14241872 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254388.1
CTGTGCTCTGAGGCGGATTACCGACGCAGACGCGTTCAACCTGTTCCATCAAACAAGTCTTCAACTACAACTCGAGTTCGGGGAATAGCGGCAACAATTTGTGTGATGAATCTCACGCAATTCGGATCGCGTGCTTTAAGCCGCTTCTTCTAAAGACGGGCTGCTTTATATCGTAGTTATATTTTAGCTCAGTTTCATCCTGCGCTTCGCCACTTCCATTAGCATTTCATGGAATTCAAAGTTGAAACCCTTGGAGAGAATCATGGTGCCGCGGGTGAAACTGCTTGTTGttgttGCAAGTCTTGTCAATCTTGGATTTTCTGGAGCCCCAACAGCACCACCAAAGAGAGCTATAGTTAAAAACAACTCAGGTGTGACGCCAGCAGGGTTGTGTGGTTCTTGGGTCAAAGAACCTGACGGAGGGCTTTTCACATCTCCTAATTATCCTGAAAAATATCCTCCTGACCGAGAATGCATATACATAATTGAAGCTTCTCCAAGGCAATGCATTGACCTGTATTTTGATGAAAAGTATGCGATTGAGCCATCGTGGGAGTGTAAGTTTGACCACATTGAAGTCAGGGATGGCCCCTTCAGCTTTTCTCCTATTATCGGCCGCTACTGTGGACAGGAGAGCCCGACCTATGTTAGGTCCAGCGGACGATACCTTTGGATCAAATTTGTGGCAGATGGTGAATTAGAAGCCACTGGATTTTCCGCTCGGTACAATTTCACCCAAGATCCTGATTTCAAAGACCTTGGAGTTCAACCACCTCTTCCTATTTGTGAATTTGAGATGAGCGGGCCAGAGGGTATTGTGGAGTCCGTAATGGTTACGAAAGAGGGCAAAGCGTTGCAGACAGAGGCCGTAGACTGCAGGTGGTTCATAAGAGCTCCTCCTGGCTCGAAGATCTATTTGCGTTTCCTGGATTATGAGATGCAGAACTCGAACGAGTGCAAGCGAAACTTTGTGGCAGTGTATGATGGGAGCAGCTCGGTCGAACACCTGAAGAATAAATTCTGTAGCACGGTGGCCAATGACGTGATGCTGCTGACTTCATTAGGTGTGATTCGTATGTGGGCCGACGAGACCAGCCGCAGGAGCCGATTCCGTATCCTCTTCACCACCTTCCACGAGCCTCCATGTGAAGGAGATGCTTTCTTCTGCCATAGCAACATGTGTATTAACCACACACTGGTGTGCAATGGTATCCAAAACTGCGTCTATCCTTGGGATGAGAATGGTTGCAAAGagaaaagaaaagccaCTATTCTGGACAGTCTCGACAACACTAATGTGACCATTATTGGTGTGACCTGCGGAGTGGTGATTATCCTGCTCACCGTGTCCATAATCATCCAAATAAAACAGCCACGGAAGAAGTACATAATCCGCAGAGATGAATTCGATCCCACGTTGCTGCACGAGGCCTTCGAACCCCCCCACTACGAGCTGTGCACGTTACGGCAAGCAGCCTCATCCGATGGTGATGTTTTACCTGACGACTTCCCCAAACTGCAGCGCACCTCCTCCAAATGCATCCACGGCCATCACTGTGGCTCTCAGGTGTCCAGCACTCGAGGCAGCCGCAGCGATCTCAGCCTGAGAGATGCTGCAGCTATTCTCTCAGAGATGGAGCCAACCATACAGCCTCCATTTCCTCTGCAAGCCACCCCTACTGGCCGCAGGAATATCCTAGTGATGAAGCACAGCTACTCGCACGATGGAGCTGAGGAGTGCGACCTGGATGATGAACTTTATGACGGGCCCACCACCAGCCGTGGGCGAGCTGCTATGGACAGAACTGTGCATCGGTCAGTATCCAATGACTTTTAATGGTTTTCCATACATTTCAGCCCAGCTTTTGGGCAGATTACTTTCTTTATTGTcctttttgtctctgttttatttgtaacagTCATGCGcttgtttattatgtttggTTACAGACAAAATTACCTTGTCTAGTCACTCCATTTTCACCGTTTTGTATCCATAATGGAttatggatgcattaaatggataTGTGAACCATAAAACTGTATTCCTGTCagttttattttcctgttttgtaTGTGACTAGTCCTGGGCTGTCTAGTCCATATAAATCGATGACTGTTATGCACTTTTGTTTGAATCCTAATATTGAGACATTATATTAGGACACTCAGTCATTGcatatgtttgatttaaatattttgattcatgctgtttggtgtggttattatttaaaacattacataaaacatgtcATTACTGCTATGGCTATTTTCATCTTTGcgtttttttaatgtaggaCAGGCTTCCCTCTTTCCTCTAGGTTTTCATTTAACTGTGTTTTActtgtgatttaatttatttgtattttcattgcTTTTATGCCTATGTGAGAGCATTTATGCTTCTTTTATACTTTGTTACCCTTCATAATTCAGTATTCATTCTCACATCGCATTACTGATAAAATTACAAACAAGTTGTTGCTGtcttattttattgcatttttattataaaatttaaagtaga

Function

NR:

description
PREDICTED: neuropilin and tolloid-like protein 1

GO: NA

KEGG:

id description
K24360 NETO; neuropilin and tolloid-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254388.1 True 2527 mRNA 0.44 9 14233819 14241872

Neighbor

gene id symbol gene type direction distance location
socs6b LOC107746913,LOC107584321,LOC107686035,LOC107664088,LOC107732589,LOC107550707 coding upstream 15268 14214494 ~ 14218551 (+)
crispld1b crispld1b,LOC107732556,LOC107746925,LOC107664039,LOC107686081,LOC107550700 coding upstream 30601 14195559 ~ 14203218 (+)
pi15b pi15b,pi15,LOC107746926,LOC107686080,LOC107732565,LOC107550701,LOC107664030,LOC108435710,LOC107586375 coding upstream 39109 14190469 ~ 14194710 (+)
tmem70 NA coding upstream 80147 14152066 ~ 14153672 (+)
rdh10b rdh10b,LOC107584387,LOC107751355,LOC107686027,LOC107732566 coding upstream 91962 14139477 ~ 14141857 (+)
atpsckmt fam173b,LOC107664046,LOC107746922,LOC107550697,LOC107686036,LOC107732578 coding downstream 801 14242673 ~ 14244944 (+)
march6 march6,LOC107746911,LOC107686038,LOC107732575,LOC107664076 coding downstream 3383 14245255 ~ 14262414 (+)
ankrd33bb ankrd33bb,LOC107550706,LOC107732577,LOC107686083,LOC107664029 coding downstream 20692 14262564 ~ 14273620 (+)
si:dkey-94e7.2 si:dkey-94e7.2,LOC107686084,LOC107586344,LOC107732574,LOC107746919,LOC108440665,LOC108268141 coding downstream 106709 14348581 ~ 14351572 (+)
tcea1 tcea1,LOC107746907,LOC107664035,LOC107558928,LOC107732572,LOC107686041,LOC107584254 coding downstream 122049 14363921 ~ 14368090 (+)
G11832 rpl7,LOC107664057,LOC107584398,LOC107686030,LOC107550715 non-coding upstream 48033 14136114 ~ 14185786 (+)
G11856 jph1b,LOC107686034,LOC107746914,LOC107550709,LOC107584332,LOC107732545,LOC107664083 non-coding upstream 66864 14108155 ~ 14166955 (+)
G11855 NA non-coding upstream 69442 14131759 ~ 14164377 (+)
LOC122357607 NA non-coding upstream 134972 14091564 ~ 14098847 (+)
G11836 NA non-coding upstream 182199 14048717 ~ 14051620 (+)
G11894 NA non-coding downstream 127816 14369688 ~ 14371834 (+)
G11895 rgs20,LOC107584260,LOC107746905 non-coding downstream 130046 14371918 ~ 14375750 (+)
G11898 LOC106524523,LOC107383785 non-coding downstream 147113 14388985 ~ 14437409 (+)
LOC122355240 NA non-coding downstream 253578 14495450 ~ 14497873 (+)
G11914 NA non-coding downstream 317988 14559860 ~ 14603545 (+)
G11854 jph1b,jph1,LOC107584332,LOC107550709,LOC107746914,LOC107732545,LOC107664083,LOC107686034,LOC107740042 other upstream 54204 14175364 ~ 14179615 (+)
rnf152 rnf152,LOC107729101,LOC107679332,LOC107567413,LOC107674343,LOC107714840,LOC107584540 other upstream 1359811 12867929 ~ 12874008 (+)
LOC122358236 NA other upstream 1607432 12623823 ~ 12626387 (+)
pld1a pld1a,LOC107688495,LOC107550602,LOC107680234,LOC107722545,LOC108442335 other upstream 2296229 11908073 ~ 11937590 (+)
mast3a LOC107722547,LOC107688474,LOC107680242,LOC107550619,LOC107709878,LOC107586070 other upstream 2726115 11482104 ~ 11507704 (+)
plxdc2a LOC107686089,LOC107713976,LOC107751571 other downstream 504235 14746107 ~ 14753161 (+)
ackr4a LOC107664061,LOC107751559,LOC107556724,LOC107751558,LOC107751560,LOC107713978,LOC107586293 other downstream 534450 14776322 ~ 14782977 (+)
LOC122357435 LOC107733881,LOC107599885,LOC107657419 other downstream 999925 15241797 ~ 15249249 (+)
dars2 dars2,LOC107720851,LOC107700987,LOC107558296,LOC107599907 other downstream 1618307 15860179 ~ 15875764 (+)
G12531 LOC107722077,LOC107568983 other downstream 2025171 16267043 ~ 16268797 (+)

Expression


Co-expression Network