thpo (thpo,LOC107553247)



Basic Information


Item Value
gene id thpo
gene name thpo,LOC107553247
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 8430547 ~ 8436282 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>XM_043254540.1
ACTCACTGCAGGGACGCCGGGGCATGTTCAGAGACGAGAGATAACAAACGTCCCAGGCGGGAAAGGAAGATTCAGAAGTCAAAAAAGTGTGGGGGCGATGCGCATGATGAATGTAGTCAATGTAGTGGAGGAGCGCGCATCTCGGTGGGCGTTTTCGCGTTACTTCTTCCAAAAAGACGCTCTCCAATGGAAAGCAACGCAAACGGAGATCTCATGTTCTAACGGGGCATGGATTTAAGTACGCAATGCATTACAAACTCACAGTTTTTCTTTGGAATGGTTGTCTTATAGGAGTGCTGGTAGTAGTGTTCAGCATGGTTGCCTCTGAACTGTCTCACGTTCACACTAGACCGATTGACTTTGTGTGTGACAGCGAGGCCAGAAGAATGATGAACAAGGTGAAGGACTTACAAGTGGAAAAGGTAGTCTGCGGTGCTGTAGACGCTCTGCCGTCTGATATTAAATTACCGTGCATCAGAATTCACAAAGCAACCTGGGAGAGAAAATCAgtGCACGAGCAGAGGGCTGAGATCCTGCTGTCGTTGGGGACTCTAGCGCAGGATGTGCGGTCTGCCAGGACGCTCAGCCAACCTGGCTGCGGACTCACTCTGCTGAAGCGCTTGGAACACAGTATCAACAACTACTTGCATGTAGTAAGGCTACTCCACATTGAGCAGGGGGAGCAGGTAGGGCCCCAGGCCGAGCTATGTCTGGGTCAGCCCTCTAAGGATTTAGGTTTGGTGTTGAAGCACTTTGGGCTTCTGCTAACTGGCAAGCTGGAGTGGCTCATTGCAGAGATGGCAAAGGGGTGCTAGACCGAAAGACTGACTTCTAATCTTTTTCTTCAACCTTGTGTAACGCGACCAGACAGGCCCAATCAGTTTTAACGACGGTCCAACTTGGAGACAATGGAGGGCCATGCACTTTGTCGGAGATCGGAGACTGCAAAggagaaaaaattaaaataaacgaCAACACTGTGCCATCTGCTGGATCTAAGCTGAAGCGACTCACCTGTTGAGACGCACCCATTGAACTTTTGAAACAGACAAACTGTTCTGAACTGAATACAGTTTCTGGTGTGTgctacatgtttttatatacatatatatatatcacagattgtatttatttattttatagcttgCATGAAGGTTGAATTGACTCCACGTGGTGTGATAGCACATGGAAGGTAACTGCGACTGAACGTGTGACAATGCGGAGGTAGTGCAGTGCACACACAGGAAAGGTCAATTTATCTATACACTCCAAGATataatatttgtgcatttaatatattttgtgtaaaaatagcacttacaatattttttaagaaaaaaaaccttgtcgTTAATTCTACATTTGGTCTTCCTCTCTGTAAAATGTATCAGTTGTACTTTTTTATGTGCatacctaaatatttaaatatattttcatttcatttgttgtgCGGGTAGTGTCTAAACAGACTGCGGTGGATTTGGTCAGAAGTAGAAAGTAAGCAGGGTCGCATTGAGCTGATCGAAAGTGACAGCTGAGACgtttgtaatattacaaaagataTCTATATGtttcgaataaatgctgttcttttgca
>XM_043254549.1
TCACTGCAGGGACGCCGGGGCATGTTCAGAGACGAGAGATAACAAACGTCCCAGGCGGGAAAGGAAGATTCAGAAGTCAAAAAAGTGTGGGGGCGATGCGCATGATGAATGTAGTCAATGTAGTGGAGGAGCGCGCATCTCGGTGGGCGTTTTCGCGTTACTTCTTCCAAAAAGACGCTCTCCAATGGAAAGCAACGCAAACGGAGATCTCATGTTCTAACGGGGCATGGATTTAAGAGTGCTGGTAGTAGTGTTCAGCATGGTTGCCTCTGAACTGTCTCACGTTCACACTAGACCGATTGACTTTGTGTGTGACAGCGAGGCCAGAAGAATGATGAACAAGGTGAAGGACTTACAAGTGGAAAAGGTAGTCTGCGGTGCTGTAGACGCTCTGCCGTCTGATATTAAATTACCGTGCATCAGAATTCACAAAGCAACCTGGGAGAGAAAATCAgtGCACGAGCAGAGGGCTGAGATCCTGCTGTCGTTGGGGACTCTAGCGCAGGATGTGCGGTCTGCCAGGACGCTCAGCCAACCTGGCTGCGGACTCACTCTGCTGAAGCGCTTGGAACACAGTATCAACAACTACTTGCATGTAGTAAGGCTACTCCACATTGAGCAGGGGGAGCAGGTAGGGCCCCAGGCCGAGCTATGTCTGGGTCAGCCCTCTAAGGATTTAGGTTTGGTGTTGAAGCACTTTGGGCTTCTGCTAACTGGCAAGCTGGAGTGGCTCATTGCAGAGATGGCAAAGGGGTGCTAGACCGAAAGACTGACTTCTAATCTTTTTCTTCAACCTTGTGTAACGCGACCAGACAGGCCCAATCAGTTTTAACGACGGTCCAACTTGGAGACAATGGAGGGCCATGCACTTTGTCGGAGATCGGAGACTGCAAAggagaaaaaattaaaataaacgaCAACACTGTGCCATCTGCTGGATCTAAGCTGAAGCGACTCACCTGTTGAGACGCACCCATTGAACTTTTGAAACAGACAAACTGTTCTGAACTGAATACAGTTTCTGGTGTGTgctacatgtttttatatacatatatatatatcacagattgtatttatttattttatagcttgCATGAAGGTTGAATTGACTCCACGTGGTGTGATAGCACATGGAAGGTAACTGCGACTGAACGTGTGACAATGCGGAGGTAGTGCAGTGCACACACAGGAAAGGTCAATTTATCTATACACTCCAAGATataatatttgtgcatttaatatattttgtgtaaaaatagcacttacaatattttttaagaaaaaaaaccttgtcgTTAATTCTACATTTGGTCTTCCTCTCTGTAAAATGTATCAGTTGTACTTTTTTATGTGCatacctaaatatttaaatatattttcatttcatttgttgtgCGGGTAGTGTCTAAACAGACTGCGGTGGATTTGGTCAGAAGTAGAAAGTAAGCAGGGTCGCATTGAGCTGATCGAAAGTGACAGCTGAGACgtttgtaatattacaaaagataTCTATATGtttcgaataaatgctgttcttttgca

Function


symbol description
thpo Predicted to enable cytokine activity and hormone activity. Acts upstream of or within common myeloid progenitor cell proliferation and thrombocyte differentiation. Predicted to be located in extracellular region. Is expressed in heart; liver; and testis. Human ortholog(s) of this gene implicated in aplastic anemia; essential thrombocythemia; and thrombocytosis. Orthologous to human THPO (thrombopoietin).

NR:

description
uncharacterized protein LOC110508802 isoform X3

GO:

id name namespace
GO:0008283 cell population proliferation biological_process
GO:0005576 extracellular region cellular_component
GO:0005125 cytokine activity molecular_function
GO:0005179 hormone activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_043254540.1 True 1597 mRNA 0.44 5 8430547 8436282
XM_043254549.1 False 1542 mRNA 0.44 5 8430547 8436280

Neighbor


gene id symbol gene type direction distance location
cdc20 cdc20,LOC107732200,LOC107553255,LOC107563294,LOC107700550,LOC107710546,LOC107677877 coding downstream 44289 8382987 ~ 8386258 (-)
kncn kncn,si:dkey-225f23.3,LOC107700491,LOC107710543,LOC107732197 coding downstream 64260 8357731 ~ 8366287 (-)
tmem275a si:dkey-225f23.5,LOC107577942,LOC107721454,LOC107677914,LOC107553245 coding downstream 77301 8348639 ~ 8353246 (-)
pbx1a pbx1a,LOC107677498,LOC107732204,LOC107700547,LOC107563289,LOC104918287,LOC108272157,LOC103479586,LOC101069707 coding downstream 165971 8208651 ~ 8264576 (-)
ptprfb ptprfb,LOC107710549,LOC107564386,LOC107700544 coding downstream 739972 7582082 ~ 7690575 (-)
fam131a fam131a,LOC107677593,LOC107700514,LOC107732946,LOC107710547,LOC107563308,LOC106528322 coding upstream 50828 8487110 ~ 8496645 (-)
eif4g1a LOC107563298,LOC107732943,LOC107677601 coding upstream 62983 8499265 ~ 8519579 (-)
tfa LOC107732944,LOC107677673 coding upstream 87204 8523486 ~ 8528743 (-)
ubxn7 ubxn7,LOC107677685,LOC107553259,LOC107732947,LOC107710610,LOC107563300,LOC107700557 coding upstream 100933 8537215 ~ 8545646 (-)
ppp1r7 ppp1r7,LOC107700558,LOC107710611,LOC107677693,LOC107732935 coding upstream 111608 8547890 ~ 8552844 (-)
G10194 NA non-coding downstream 360194 8070154 ~ 8070353 (-)
G10185 NA non-coding downstream 495922 7934401 ~ 7934625 (-)
LOC122328801 NA non-coding downstream 638937 7788737 ~ 7791610 (-)
G10165 NA non-coding downstream 898482 7526339 ~ 7532065 (-)
G10029 rpl5,LOC107568084,LOC107694375,LOC107743362,LOC107716952 non-coding downstream 1224145 7204484 ~ 7206402 (-)
G10345 NA non-coding upstream 194124 8630406 ~ 8630606 (-)
G10389 NA non-coding upstream 318567 8754849 ~ 8755145 (-)
G10400 NA non-coding upstream 362300 8798582 ~ 8798986 (-)
G10432 NA non-coding upstream 493208 8929490 ~ 8930083 (-)
G10438 NA non-coding upstream 506817 8943099 ~ 8943593 (-)
zfyve9a LOC107700554,LOC107563295,LOC107677579,LOC107553256,LOC107732202 other downstream 2643 8403327 ~ 8427904 (-)
G10213 NA other downstream 322759 8106856 ~ 8107788 (-)
G10196 NA other downstream 358713 8070776 ~ 8071834 (-)
G10178 NA other downstream 645393 7784468 ~ 7785154 (-)
G10170 kdm4ab,LOC107564389,LOC107700543,LOC107551714,LOC107684932,LOC107743373 other downstream 936703 7492206 ~ 7493844 (-)
abca4b abca4,abca4b,LOC107564534,LOC107680047,LOC107745690 other upstream 745774 9182056 ~ 9210041 (-)
plppr5a plppr5,plppr5a,LOC107722655,LOC107693754,LOC107677753,LOC107589876,LOC108441579,LOC107718169 other upstream 1055281 9491563 ~ 9519781 (-)
si:ch211-267e7.3 si:ch211-267e7.3,LOC107722581,LOC107594654,LOC107718186,LOC107589917,LOC107677774,LOC107693699 other upstream 1170041 9606323 ~ 9618473 (-)
hfm1 hfm1,LOC107722645,LOC107586144 other upstream 1643900 10080182 ~ 10095857 (-)
pkn2a pkn2,LOC107693716,LOC107585639,LOC107722607,LOC107718113,LOC107691687 other upstream 1683691 10119973 ~ 10139585 (-)

Expression



Co-expression Network