lhx8a (lhx8,lhx8a,LOC107693563,LOC108436043)


Basic Information

Item Value
gene id lhx8a
gene name lhx8,lhx8a,LOC107693563,LOC108436043
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 7009583 ~ 7013214 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254989.1
CCGTTAATGGGTCGCTTGGCCGCCCAGGTTAAAAGACGGTAGCTCTAGCGGGCAGGGTATACAGTGTGTTTGAGCTTCTCTCGTCATGCCCGCGCCCTGTGGAGGTTCAGTCCTCTGCACTTCTCACACCGTAGAGCTGCATCAAGTTCTAAACGCAGTGGATAAAACCCAAGCGCTGTTTGAAGAGGTATCGTGTTCGTCGTCGTCTTTGTCGCCCGGCTCTTCACTTCATGCCATGACAGAGAAAGCCATCTGTACCAGCTGTGGCACCGAGATCGTCGACAAATATCTGTTAAAGGTGAACGATATGTGCTGGCACGTGAGATGTCTGTCGTGCAGCGTGTGTCAAACATCTTTGGGCAGACACATCAGCtgttatataaaagaaaaggaGATATTCTGTAAATTGGACTACTTCAGAAAGTACGGAACGCGTTGTGCTCACTGTGGTAGGAATATCCATTCAAACGACTGGGTCCGCAGGGCAAAAGGAAACACCTACCACCTGGCTTGCTTTGCTTGCTTCTCTTGCAAGAGACAGCTGTCCACAGGAGAAGAGTTTGCACTGGTAGATGAGAGGGTTCTGTGTCGTGTGCATTATGACTGCATGTTGGACAACCTGAAACGTGTCATGGAGAATGGAAAAGGAGTGAATGCGGAGGGAGCTGTTCCCTCAGAGCAGGAAGTAAATCAGCCTAAACCAGCCAAGAGGGCACGGACCAGTTTTACAGCTGACCAGTTACAGgTAATGCAAGCCCAGTTTGCTCAGGACAACAATCCAGATGCTCAGACTTTACAAAAGTTGGCAGAAAGAACTGGTCTAAGCCGGAGGGTTATTCagGTTTGGTTTCAGAACTGTCGAGCTCGTCATAAGAAGCATGTTAGCCCAAATCACTCTTCAGCTGCACCAGTGTCATCTCTGCAGTCCACTCGGCTTTCTCCTCCCCTAATAGATGAATTTCAGTACACTGCTTTTGCCCCTGTAGACACCCCTATGCTGACTGCACTACACTCCTATATGGATGGTATGTTATGTGGAATATCGCAATATTCTATTCCACTCTCCCTCTTCACTGGTTCTGCAGCCTCTCTTGCCCCACTCATTGACACAGCTGCCCATCAGCCACGCCTAAGATGTCCACTGCTGCCACATGGTCAGGTCAGAGTCCAGAGGACAGCATGAGAAAATCTTGATTCTTACTGACTATTGAACAAGACCCATGCTACTTTCTTTCATGGGCACTTACTGAAGGATATGTCTTGTGATgtttaaagtcttaattgtgGGAAAAAAGCctgaagtttttgtttaatatataaatatatattatctatatagtgatggaataaatttcatttaatttatttcttgtaTGTGATTGAGCACTTTGTTTTAATATGCGTACCATGGAGTTCTTAGtttttgatttagttgacaaacttattttatttttgatttgttctAAATTTACATTTGGAAGATGAAGAAAAGCCAATAAAATTTGTTGCTAGCATTGATCAAA
>XM_043254999.1
ggaaaacaaaaatttgaGTTAAAACATGGTCACGACGTGCATTCAGCTGCAGCACCCATATGGATTAATTCTCGCAGTAGCCCAGGCCTACAAGAGATCTGAGAGTGGATAAAACATACTGGGCAATGTACTGGAAAAATGAACAAACCACATCGAAGGAAAGTCCAAGCAAGAACACTGATAAAACCCAAGCGCTGTTTGAAGAGGTATCGTGTTCGTCGTCGTCTTTGTCGCCCGGCTCTTCACTTCATGCCATGACAGAGAAAGCCATCTGTACCAGCTGTGGCACCGAGATCGTCGACAAATATCTGTTAAAGGTGAACGATATGTGCTGGCACGTGAGATGTCTGTCGTGCAGCGTGTGTCAAACATCTTTGGGCAGACACATCAGCtgttatataaaagaaaaggaGATATTCTGTAAATTGGACTACTTCAGAAAGTACGGAACGCGTTGTGCTCACTGTGGTAGGAATATCCATTCAAACGACTGGGTCCGCAGGGCAAAAGGAAACACCTACCACCTGGCTTGCTTTGCTTGCTTCTCTTGCAAGAGACAGCTGTCCACAGGAGAAGAGTTTGCACTGGTAGATGAGAGGGTTCTGTGTCGTGTGCATTATGACTGCATGTTGGACAACCTGAAACGTGTCATGGAGAATGGAAAAGGAGTGAATGCGGAGGGAGCTGTTCCCTCAGAGCAGGAAGTAAATCAGCCTAAACCAGCCAAGAGGGCACGGACCAGTTTTACAGCTGACCAGTTACAGgTAATGCAAGCCCAGTTTGCTCAGGACAACAATCCAGATGCTCAGACTTTACAAAAGTTGGCAGAAAGAACTGGTCTAAGCCGGAGGGTTATTCagGTTTGGTTTCAGAACTGTCGAGCTCGTCATAAGAAGCATGTTAGCCCAAATCACTCTTCAGCTGCACCAGTGTCATCTCTGCAGTCCACTCGGCTTTCTCCTCCCCTAATAGATGAATTTCAGTACACTGCTTTTGCCCCTGTAGACACCCCTATGCTGACTGCACTACACTCCTATATGGATGGTATGTTATGTGGAATATCGCAATATTCTATTCCACTCTCCCTCTTCACTGGTTCTGCAGCCTCTCTTGCCCCACTCATTGACACAGCTGCCCATCAGCCACGCCTAAGATGTCCACTGCTGCCACATGGTCAGGTCAGAGTCCAGAGGACAGCATGAGAAAATCTTGATTCTTACTGACTATTGAACAAGACCCATGCTACTTTCTTTCATGGGCACTTACTGAAGGATATGTCTTGTGATgtttaaagtcttaattgtgGGAAAAAAGCctgaagtttttgtttaatatataaatatatattatctatatagtgatggaataaatttcatttaatttatttcttgtaTGTGATTGAGCACTTTGTTTTAATATGCGTACCATGGAGTTCTTAGtttttgatttagttgacaaacttattttatttttgatttgttctAAATTTACATTTGGAAGATGAAGAAAAGCCAATAAAATTTGTTGCTAGCATTGATCAAA
>XM_043255008.1
CGTTAATGGGTCGCTTGGCCGCCCAGGTTAAAAGACGGTAGCTCTAGCGGGCAGGGTATACAGTGTGTTTGAGCTTCTCTCGTCATGCCCGCGCCCTGTGGAGGTTCAGTCCTCTGCACTTCTCACACCGTAGAGCTGCATCAAGTTCTAAACGCAGTGGATAAAACCCAAGCGCTGTTTGAAGAGGTATCGTGTTCGTCGTCGTCTTTGTCGCCCGGCTCTTCACTTCATGCCATGACAGAGAAAGCCATCTGTACCAGCTGTGGCACCGAGATCGTCGACAAATATCTGTTAAAGGTGAACGATATGTGCTGGCACGTGAGATGTCTGTCGTGCAGCGTGTGTCAAACATCTTTGGGCAGACACATCAGCtgttatataaaagaaaaggaGATATTCTGTAAATTGGACTACTTCAGAAAGTACGGAACGCGTTGTGCTCACTGTGGTAGGAATATCCATTCAAACGACTGGGTCCGCAGGGCAAAAGGAAACACCTACCACCTGGCTTGCTTTGCTTGCTTCTCTTGCAAGAGACAGCTGTCCACAGGAGAAGAGTTTGCACTGGTAGATGAGAGGGTTCTGTGTCGTGTGCATTATGACTGCATGTTGGACAACCTGAAACGTGTCATGGAGAATGGAAAAGGAGTGAATGCGGAGGGAGCTGTTCCCTCAGAGCAGGAAGTAAATCAGCCTAAACCAGCCAAGAGGGCACGGACCAGTTTTACAGCTGACCAGTTACAGgTAATGCAAGCCCAGTTTGCTCAGGACAACAATCCAGATGCTCAGACTTTACAAAAGTTGGCAGAAAGAACTGGTCTAAGCCGGAGGGTTATTCagGTTTGGTTTCAGAACTGTCGAGCTCGTCATAAGAAGCATGTTAGCCCAAATCACTCTTCAGCTGCACCAGTGTCATCTCTGCAGTCCACTCGGCTTTCTCCTCCCCTAATAGATGAATTTCAGTACACTGCTTTTGCCCCTGTAGACACCCCTATGCTGACTGCACTACACTCCTATATGGATGTCCACTCTCCCTCTTCACTGGTTCTGCAGCCTCTCTTGCCCCACTCATTGACACAGCTGCCCATCAGCCACGCCTAAGATGTCCACTGCTGCCACATGGTCAGGTCAGAGTCCAGAGGACAGCATGAGAAAATCTTGATTCTTACTGACTATTGAACAAGACCCATGCTACTTTCTTTCATGGGCACTTACTGAAGGATATGTCTTGTGATgtttaaagtcttaattgtgGGAAAAAAGCctgaagtttttgtttaatatataaatatatattatctatatagtgatggaataaatttcatttaatttatttcttgtaTGTGATTGAGCACTTTGTTTTAATATGCGTACCATGGAGTTCTTAGtttttgatttagttgacaaacttattttatttttgatttgttctAAATTTACATTTGGAAGATGAAGAAAAGCCAATAAAATTTGTTGCTAGCATTGATCAAA
>XM_043255017.1
aacaaaaatttgaGTTAAAACATGGTCACGACGTGCATTCAGCTGCAGCACCCATATGGATTAATTCTCGCAGTAGCCCAGGCCTACAAGAGATCTGAGAGTGGATAAAACATACTGGGCAATGTACTGGAAAAATGAACAAACCACATCGAAGGAAAGTCCAAGCAAGAACACTGATAAAACCCAAGCGCTGTTTGAAGAGGTATCGTGTTCGTCGTCGTCTTTGTCGCCCGGCTCTTCACTTCATGCCATGACAGAGAAAGCCATCTGTACCAGCTGTGGCACCGAGATCGTCGACAAATATCTGTTAAAGGTGAACGATATGTGCTGGCACGTGAGATGTCTGTCGTGCAGCGTGTGTCAAACATCTTTGGGCAGACACATCAGCtgttatataaaagaaaaggaGATATTCTGTAAATTGGACTACTTCAGAAAGTACGGAACGCGTTGTGCTCACTGTGGTAGGAATATCCATTCAAACGACTGGGTCCGCAGGGCAAAAGGAAACACCTACCACCTGGCTTGCTTTGCTTGCTTCTCTTGCAAGAGACAGCTGTCCACAGGAGAAGAGTTTGCACTGGTAGATGAGAGGGTTCTGTGTCGTGTGCATTATGACTGCATGTTGGACAACCTGAAACGTGTCATGGAGAATGGAAAAGGAGTGAATGCGGAGGGAGCTGTTCCCTCAGAGCAGGAAGTAAATCAGCCTAAACCAGCCAAGAGGGCACGGACCAGTTTTACAGCTGACCAGTTACAGgTAATGCAAGCCCAGTTTGCTCAGGACAACAATCCAGATGCTCAGACTTTACAAAAGTTGGCAGAAAGAACTGGTCTAAGCCGGAGGGTTATTCagGTTTGGTTTCAGAACTGTCGAGCTCGTCATAAGAAGCATGTTAGCCCAAATCACTCTTCAGCTGCACCAGTGTCATCTCTGCAGTCCACTCGGCTTTCTCCTCCCCTAATAGATGAATTTCAGTACACTGCTTTTGCCCCTGTAGACACCCCTATGCTGACTGCACTACACTCCTATATGGATGTCCACTCTCCCTCTTCACTGGTTCTGCAGCCTCTCTTGCCCCACTCATTGACACAGCTGCCCATCAGCCACGCCTAAGATGTCCACTGCTGCCACATGGTCAGGTCAGAGTCCAGAGGACAGCATGAGAAAATCTTGATTCTTACTGACTATTGAACAAGACCCATGCTACTTTCTTTCATGGGCACTTACTGAAGGATATGTCTTGTGATgtttaaagtcttaattgtgGGAAAAAAGCctgaagtttttgtttaatatataaatatatattatctatatagtgatggaataaatttcatttaatttatttcttgtaTGTGATTGAGCACTTTGTTTTAATATGCGTACCATGGAGTTCTTAGtttttgatttagttgacaaacttattttatttttgatttgttctAAATTTACATTTGGAAGATGAAGAAAAGCCAATAAAATTTGTTGCTAGCATTGATCAAA
>XM_043255025.1
AAGCCGATAGAAAGCCAGTTAATATCTACCTGAGGAGTTTCAGTGCATGAAACGAAGAGGAAGACGCTTTGTGTTAAGAATCGCCCGTATTTCTGCACCTCTCCTTGCTCGCTTGTAGAGGTTGTCATGGTAAAAAGGATAAAACCCAAGCGCTGTTTGAAGAGGTATCGTGTTCGTCGTCGTCTTTGTCGCCCGGCTCTTCACTTCATGCCATGACAGAGAAAGCCATCTGTACCAGCTGTGGCACCGAGATCGTCGACAAATATCTGTTAAAGGTGAACGATATGTGCTGGCACGTGAGATGTCTGTCGTGCAGCGTGTGTCAAACATCTTTGGGCAGACACATCAGCtgttatataaaagaaaaggaGATATTCTGTAAATTGGACTACTTCAGAAAGTACGGAACGCGTTGTGCTCACTGTGGTAGGAATATCCATTCAAACGACTGGGTCCGCAGGGCAAAAGGAAACACCTACCACCTGGCTTGCTTTGCTTGCTTCTCTTGCAAGAGACAGCTGTCCACAGGAGAAGAGTTTGCACTGGTAGATGAGAGGGTTCTGTGTCGTGTGCATTATGACTGCATGTTGGACAACCTGAAACGTGTCATGGAGAATGGAAAAGGAGTGAATGCGGAGGGAGCTGTTCCCTCAGAGCAGGAAGTAAATCAGCCTAAACCAGCCAAGAGGGCACGGACCAGTTTTACAGCTGACCAGTTACAGgTAATGCAAGCCCAGTTTGCTCAGGACAACAATCCAGATGCTCAGACTTTACAAAAGTTGGCAGAAAGAACTGGTCTAAGCCGGAGGGTTATTCagGTTTGGTTTCAGAACTGTCGAGCTCGTCATAAGAAGCATGTTAGCCCAAATCACTCTTCAGCTGCACCAGTGTCATCTCTGCAGTCCACTCGGCTTTCTCCTCCCCTAATAGATGAATTTCAGTACACTGCTTTTGCCCCTGTAGACACCCCTATGCTGACTGCACTACACTCCTATATGGATGGTATGTTATGTGGAATATCGCAATATTCTATTCCACTCTCCCTCTTCACTGGTTCTGCAGCCTCTCTTGCCCCACTCATTGACACAGCTGCCCATCAGCCACGCCTAAGATGTCCACTGCTGCCACATGGTCAGGTCAGAGTCCAGAGGACAGCATGAGAAAATCTTGATTCTTACTGACTATTGAACAAGACCCATGCTACTTTCTTTCATGGGCACTTACTGAAGGATATGTCTTGTGATgtttaaagtcttaattgtgGGAAAAAAGCctgaagtttttgtttaatatataaatatatattatctatatagtgatggaataaatttcatttaatttatttcttgtaTGTGATTGAGCACTTTGTTTTAATATGCGTACCATGGAGTTCTTAGtttttgatttagttgacaaacttattttatttttgatttgttctAAATTTACATTTGGAAGATGAAGAAAAGCCAATAAAATTTGTTGCTAGCATTGATCAAA
>XM_043255036.1
CGGCAGTTGTTTTTtctaaagtttttaaataatttaaaagggttaagaaaagaaagaaagagataggtagagagcgagaaagacaaaaaaaagaaaagaaagaaagaggcaCTTTGGAAAGCAACATATATGGGATAAAACCCAAGCGCTGTTTGAAGAGGTATCGTGTTCGTCGTCGTCTTTGTCGCCCGGCTCTTCACTTCATGCCATGACAGAGAAAGCCATCTGTACCAGCTGTGGCACCGAGATCGTCGACAAATATCTGTTAAAGGTGAACGATATGTGCTGGCACGTGAGATGTCTGTCGTGCAGCGTGTGTCAAACATCTTTGGGCAGACACATCAGCtgttatataaaagaaaaggaGATATTCTGTAAATTGGACTACTTCAGAAAGTACGGAACGCGTTGTGCTCACTGTGGTAGGAATATCCATTCAAACGACTGGGTCCGCAGGGCAAAAGGAAACACCTACCACCTGGCTTGCTTTGCTTGCTTCTCTTGCAAGAGACAGCTGTCCACAGGAGAAGAGTTTGCACTGGTAGATGAGAGGGTTCTGTGTCGTGTGCATTATGACTGCATGTTGGACAACCTGAAACGTGTCATGGAGAATGGAAAAGGAGTGAATGCGGAGGGAGCTGTTCCCTCAGAGCAGGAAGTAAATCAGCCTAAACCAGCCAAGAGGGCACGGACCAGTTTTACAGCTGACCAGTTACAGgTAATGCAAGCCCAGTTTGCTCAGGACAACAATCCAGATGCTCAGACTTTACAAAAGTTGGCAGAAAGAACTGGTCTAAGCCGGAGGGTTATTCagGTTTGGTTTCAGAACTGTCGAGCTCGTCATAAGAAGCATGTTAGCCCAAATCACTCTTCAGCTGCACCAGTGTCATCTCTGCAGTCCACTCGGCTTTCTCCTCCCCTAATAGATGAATTTCAGTACACTGCTTTTGCCCCTGTAGACACCCCTATGCTGACTGCACTACACTCCTATATGGATGGTATGTTATGTGGAATATCGCAATATTCTATTCCACTCTCCCTCTTCACTGGTTCTGCAGCCTCTCTTGCCCCACTCATTGACACAGCTGCCCATCAGCCACGCCTAAGATGTCCACTGCTGCCACATGGTCAGGTCAGAGTCCAGAGGACAGCATGAGAAAATCTTGATTCTTACTGACTATTGAACAAGACCCATGCTACTTTCTTTCATGGGCACTTACTGAAGGATATGTCTTGTGATgtttaaagtcttaattgtgGGAAAAAAGCctgaagtttttgtttaatatataaatatatattatctatatagtgatggaataaatttcatttaatttatttcttgtaTGTGATTGAGCACTTTGTTTTAATATGCGTACCATGGAGTTCTTAGtttttgatttagttgacaaacttattttatttttgatttgttctAAATTTACATTTGGAAGATGAAGAAAAGCCAATAAAATTTGTTGCTAGCATTGATCAAA
>XR_006252316.1
CCGTTAATGGGTCGCTTGGCCGCCCAGGTTAAAAGACGGTAGCTCTAGCGGGCAGGGTATACAGTGTGTTTGAGCTTCTCTCGTCATGCCCGCGCCCTGTGGAGGTTCAGTCCTCTGCACTTCTCACACCGTAGAGCTGCATCAAGTTCTAAACGCAGTGGATAAAACCCAAGCGCTGTTTGAAGAGGTATCGTGTTCGTCGTCGTCTTTGTCGCCCGGCTCTTCACTTCATGCCATGACAGAGAAAGCCATCTGTACCAGCTGTGGCACCGAGATCGTCGACAAATATCTGTTAAAGGTGAACGATATGTGCTGGCACGTGAGATGTCTGTCGTGCAGCGTGTGTCAAACATCTTTGGGCAGACACATCAGCtgttatataaaagaaaaggaGATATTCTGTAAATTGGACTACTTCAGAAAGTACGGAACGCGTTGTGCTCACTGTGGTAGGAATATCCATTCAAACGACTGGGTCCGCAGGGCAAAAGGAAACACCTACCACCTGGCTTGCTTTGCTTGCTTCTCTTGCAAGAGACAGCTGTCCACAGGAGAAGAGTTTGCACTGGTAGATGAGAGGGTTCTGTGTCGTGTGCATTATGACTGCATGTTGGACAACCTGAAACGTGTCATGGAGAATGGAAAAGGAGTGAATGCGGAGGGAGCTGTTCCCTCAGAGCAGGAAGTAAATCAGCCTAAACCAGCCAAGAGGGCACGGACCAGTTTTACAGCTGACCAGTTACAGgTAATGCAAGCCCAGTTTGCTCAGGACAACAATCCAGATGCTCAGACTTTACAAAAGTTGGCAGAAAGAACTGGTCTAAGCCGGAGGGTTATTCagTACTTCATCCATCTGCCGCTCAGGTTTGGTTTCAGAACTGTCGAGCTCGTCATAAGAAGCATGTTAGCCCAAATCACTCTTCAGCTGCACCAGTGTCATCTCTGCAGTCCACTCGGCTTTCTCCTCCCCTAATAGATGAATTTCAGTACACTGCTTTTGCCCCTGTAGACACCCCTATGCTGACTGCACTACACTCCTATATGGATGTCCACTCTCCCTCTTCACTGGTTCTGCAGCCTCTCTTGCCCCACTCATTGACACAGCTGCCCATCAGCCACGCCTAAGATGTCCACTGCTGCCACATGGTCAGGTCAGAGTCCAGAGGACAGCATGAGAAAATCTTGATTCT
>XR_006252317.1
CCGTTAATGGGTCGCTTGGCCGCCCAGGTTAAAAGACGGTAGCTCTAGCGGGCAGGGTATACAGTGTGTTTGAGCTTCTCTCGTCATGCCCGCGCCCTGTGGAGGTTCAGTCCTCTGCACTTCTCACACCGTAGAGCTGCATCAAGTTCTAAACGCAGTGGATAAAACCCAAGCGCTGTTTGAAGAGGTATCGTGTTCGTCGTCGTCTTTGTCGCCCGGCTCTTCACTTCATGCCATGACAGAGAAAGCCATCTGTACCAGCTGTGGCACCGAGATCGTCGACAAATATCTGTTAAAGGTGAACGATATGTGCTGGCACGTGAGATGTCTGTCGTGCAGCGTGTGTCAAACATCTTTGGGCAGACACATCAGCtgttatataaaagaaaaggaGATATTCTGTAAATTGGACTACTTCAGAAAGTACGGAACGCGTTGTGCTCACTGTGGTAGGAATATCCATTCAAACGACTGGGTCCGCAGGGCAAAAGGAAACACCTACCACCTGGCTTGCTTTGCTTGCTTCTCTTGCAAGAGACAGCTGTCCACAGGAGAAGAGTTTGCACTGGTAGATGAGAGGGTTCTGTGTCGTGTGCATTATGACTGCATGTTGGACAACCTGAAACGTGTCATGGAGAATGGAAAAGGAGTGAATGCGGAGGGAGCTGTTCCCTCAGAGCAGGAAGTAAATCAGCCTAAACCAGCCAAGAGGGCACGGACCAGTTTTACAGCTGACCAGTTACAGgTAATGCAAGCCCAGTTTGCTCAGGACAACAATCCAGATGCTCAGACTTTACAAAAGTTGGCAGAAAGAACTGGTCTAAGCCGGAGGGTTATTCagTACTTCATCCATCTGCCGCTCAGGTTTGGTTTCAGAACTGTCGAGCTCGTCATAAGAAGCATGTTAGCCCAAATCACTCTTCAGCTGCACCAGTGTCATCTCTGCAGTCCACTCGGCTTTCTCCTCCCCTAATAGATGAATTTCAGTACACTGCTTTTGCCCCTGTAGACACCCCTATGCTGACTGCACTACACTCCTATATGGATGGTATGTTATGTGGAATATCGCAATATTCTATTCCACTCTCCCTCTTCACTGGTTCTGCAGCCTCTCTTGCCCCACTCATTGACACAGCTGCCCATCAGCCACGCCTAAGATGTCCACTGCTGCCACATGGTCAGGTCAGAGTCCAGAGGACAGCATGAGAAAATCTTGA

Function

symbol description
lhx8a Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in forebrain neuron development and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be active in nucleus. Is expressed in brain; dental mesenchyme; and pharynx. Orthologous to human LHX8 (LIM homeobox 8).
lhx8 Enables sequence-specific double-stranded DNA binding activity. Predicted to be involved in forebrain neuron development and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within animal organ development and learning or memory. Predicted to be located in female germ cell nucleus. Predicted to be part of chromatin. Predicted to be active in nucleus.

NR:

description
LIM/homeobox protein Lhx8-like isoform X1

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K09375 LHX6_8; LIM homeobox protein 6/8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254989.1 False 1523 mRNA 0.45 8 7009583 7012373
XM_043254999.1 True 1542 mRNA 0.43 8 7009583 7013214
XM_043255008.1 False 1491 mRNA 0.45 8 7009583 7012372
XM_043255017.1 False 1507 mRNA 0.43 8 7009583 7013210
XM_043255025.1 False 1500 mRNA 0.43 8 7009583 7012518
XM_043255036.1 False 1496 mRNA 0.42 8 7009583 7012657
XR_006252316.1 False 1190 transcript 0.50 8 7009908 7012373
XR_006252317.1 False 1217 transcript 0.49 8 7009912 7012373

Neighbor

gene id symbol gene type direction distance location
dis3l2 dis3l2 coding downstream 364905 6600045 ~ 6644678 (-)
mier1b mier1b,LOC107751718,LOC107683747 coding downstream 418284 6531927 ~ 6591299 (-)
nyap2b LOC107721795,LOC107683688,LOC107570858 coding downstream 566274 6410721 ~ 6443309 (-)
cwc25 cwc25,LOC107562839,LOC107572154,LOC107707532,LOC107675249,LOC102792885 coding downstream 606604 6389647 ~ 6402979 (-)
cldn15la cldn15la,LOC107737418,LOC107550432,LOC107695160 coding downstream 1149671 5855125 ~ 5859912 (-)
tyw3 tyw3 coding upstream 67292 7080506 ~ 7084049 (-)
acot11a acot11,acot11a coding upstream 97922 7111136 ~ 7125664 (-)
mrpl37 mrpl37 coding upstream 138631 7151845 ~ 7156830 (-)
tceanc2 tceanc2 coding upstream 148028 7161242 ~ 7164222 (-)
glmna glmn,glmna coding upstream 157725 7170939 ~ 7176952 (-)
G9927 NA non-coding downstream 20694 6988611 ~ 6988889 (-)
G9924 NA non-coding downstream 24045 6985182 ~ 6985538 (-)
G9897 NA non-coding downstream 174940 6829434 ~ 6834643 (-)
G9888 NA non-coding downstream 318831 6690390 ~ 6690752 (-)
G9886 NA non-coding downstream 344781 6664427 ~ 6664802 (-)
G9938 LOC101886504,LOC101886486,LOC101886427 non-coding upstream 25292 7038506 ~ 7042242 (-)
G9969 NA non-coding upstream 92967 7106181 ~ 7106426 (-)
G9970 NA non-coding upstream 93404 7106618 ~ 7106845 (-)
G9971 NA non-coding upstream 93697 7106911 ~ 7107138 (-)
G9972 NA non-coding upstream 94013 7107227 ~ 7109292 (-)
G9926 LOC107563058,LOC107549254,LOC108267243 other downstream 21470 6986301 ~ 6988113 (-)
G9894 NA other downstream 180581 6828490 ~ 6829002 (-)
G9891 NA other downstream 267410 6741683 ~ 6742173 (-)
LOC122327746 dlg1,LOC107738730,LOC108427717,LOC108271975,LOC107659037 other downstream 831479 6125113 ~ 6178104 (-)
si:ch1073-184j22.2 si:ch1073-184j22.2,LOC107705298,LOC107564252,LOC107653511,LOC108440875,LOC108280510 other downstream 1202958 5804216 ~ 5806625 (-)
dipk1aa fam69a,fam69aa,LOC107716951,LOC107568082,LOC108436064,LOC107694372,LOC107743375,LOC108280758 other upstream 193328 7206542 ~ 7223739 (-)
G10170 kdm4ab,LOC107564389,LOC107700543,LOC107551714,LOC107684932,LOC107743373 other upstream 478992 7492206 ~ 7493844 (-)
G10178 NA other upstream 771254 7784468 ~ 7785154 (-)
G10196 NA other upstream 1057562 8070776 ~ 8071834 (-)
G10213 NA other upstream 1093642 8106856 ~ 8107788 (-)

Expression


Co-expression Network