LOC122356610 (LOC107553251,LOC107594670,LOC107710624,LOC107732954,LOC107700569,LOC559501,LOC108413460,LOC107677956)


Basic Information

Item Value
gene id LOC122356610
gene name LOC107553251,LOC107594670,LOC107710624,LOC107732954,LOC107700569,LOC559501,LOC108413460,LOC107677956
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 8944408 ~ 9001261 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255523.1
CAGCAGGTTAGTTGTTCTCTCCCGGGCGGGATAGGTAAGCGCTCGCAGCAACTGATTTTAACTGGAGGCTCGGCTGTGATAACTCGCATTCCACGGACTGAGTTTCATTACAGTGACTTTTATTGACAAAGGCTGGAGTTCTCATCAGTAAAGTATGTTGAGCTGGGTGTAGGAGAACCTGTGCGCCGCATCCAGTCAGTTACTGTGGAGTAACGTTTCTGGGACGTAATCTGATCAGTAAAGACCGGATTCATTCACTGGACGGTTTCTGTCTGGAAAACTGTCAAGACTGCAGAAAGCGCACGGGAAACAGCGATGGACAGGCGGATGATCTGCAATGGCCTCCACTAATGGCTTCAAGAAGGAATTAATATCGTTCTTTCACACCGGTGACCCGCATTTACCGCAGCTTTGTCAAAACACGTTCGAGCGCCCCTGCAACACAAtcagacaaaaagaaacaaatgagtGAAATTAGAGCAGCCTGAGGAAGCCGAGTCAAAACTGGCACAGATGCCAGGcttttttccactataaagtTCAGTGTTACCACAGAGGCGGTCTGCCTCATCATCCTCTGCCTTCTTATTATCTATCAGACTCCATTTAATGAGGCATCAGAAGACAGGCGCAAGCATGTACTTACTTCTAGTGTTTGCACTACAGGCCCTGTGGGTGAGTTGGTGTCACGCCACGCAGCATTACCCGGCCTCGTGGGGGCACTACGATGTTTGTAAGTCCCAGGTTTATGCAGAGGACCGCCTGGCCTGGCACTACATGGCCTGCCAGCCTGAGGCCACCGATATGACCAAATACCTGACCGTGTCTCTTGACCCACCCAACATTACCTGCGGAGACCCACCGGAGATGTACTGTGCCCTGGAAAACCCATATATGTGTAATAACGAATGCGACGCTGATACCGAAGAGCTGGCCCACCCGCCCGAACTCATGTTTGACTCCGAAGGACGAAACCCAACCACGTTCTGGCAGTCGACCTCCTGGAAGAAATACCCCAAGCCCCTTCAGGTCAACATCACGCTGTCCTGGAACAAAACAATAGAACTCACAGATGACATTGTCCTCACCTTCGAGTCCGGTCGACCCGAGCAGTTGGTCTTGGAGAAGTCGCTGGATTACGGCCGTACGTGGCAGCCGTATCAGTTTTACGCATCTGACTGTTTGGATGCCTTTACCATGGAGCCAAAAGCGGTACATCAGCTGACCCCAAGCACGATGCTAGAAATCATCTGCACTGAGGCCTATTCGACGGGCTACGTGTGGAAGTACGATAAGACTGTGCGTTTCGAGATTAAAGACCGCTTCGCCCTTCTCGCCGGCCCCAGACTGCACAACATGGCTTCTCTGTATGGGCAGCTGGACACCACCAAGAACCTAAGGGATTTCTTCACCCTCACTGACCTTCGCATTAGACTTCTACGGCCCGCCACCGGAGCCACAATGGTGGATGAAAACAACCTTTCAAGATACTTCTATGCTATCTCGGACATCAAAGTGCAGGGCAGGTGCAAGTGCAATCTGCATGCCAACAGCTGTGTTTTTGACAAAGGGAAGCTGGGGTGCGAGTGCGAGCACAACACCACAGGCCCGGATTGCGCACGCTGCAAGAGACACTACCAGGGCCGAGCCTGGAGCATGGGCTCCTACCTGCCCATCCCCAAGGGTACTGCCAATATCTGTATCCCGAACAATCTTGGGACCTCCGTTCGACCGAATGCTTCTTCTCTTGGAACAGCAAACCGAAATCAAGCTCGAGTGTGTGACAACGTGCTCCTGCGCTGTCAGAACGGTGGTGTGTGTCACCACCACCAGCGCTGCCAGTGTCCGGCCGGTTTCGGCGGCATACTGTGTGAGAAGGCCCAATGCCAGGGTGACTCTTGCGAGGATCTGCAATCCAGCCAGCCGTCTCTCCGCCCCCCGCCCACGGCCCAGACTCTCCCGCTGGCTCTTCTATCTCTCATCCCCTCCCTGCTGGCCACCCGGGGCCTTGCATCACTCTGAGGGGAATGCTTTCGCCCCAAAGACATTCTCCACGGGGGCTCCAATCATGACTTCCTGTTAGAGGACACGCGACGACTGAAAAGAAATGCTCCTTTGATGCGGGGGGGATAAAACGAAACATCTTTTTAGGAAAGCGTAAAGTTTTCTACTCAGTGCTATGTCAATTAATTTGCCAGAGATTATGGATAAACTGAGAAACTAAAAACTGCGTGAgaatttacaacaacaacaaaaaagaataacgtaaaaaaaaagctgacacTAATGACCGTCTTTGTCTTTGTTGAAAATGTTAGgaagaaatcaaatcaatacACTGTTACGATGCTCTGAAGCCATCCGTCAGATAAAACTTTATCTCAAGCCTCAGAGCGCAGAAACACtgcaatacaattttttttttggagacaAATCATCAATGTGAAGATGAATCAAGATGTACTTGTAGACTGCCACCTGAATTTACGCACACACCGCCACGACTGGTTGTCAAACTTCTCACACTTTACCTTTTCCTGaccctctctcttcttcttgtAACTCTGTGAAGTCATGTAAAAGACCAATGATGTATGTCACACAAGAATTGATCCAGATAATTCATTCAGAGCTGGTGTAagatcaaatatacagtaacatGAGAGACAACTGTTGACATTTTGTACTGGGATGTTTTCATGACGGTGAGAATTGGAACACGAAGAAATGCATCACTGCGACAAACCTGTAGAATTTGGATTGGTCCTTTATTGCCCTGATGAAGTTGAATATCTCTGTTCGGTTGCTAatctttttgcttaaaacatgCGTTTACATTCTCACCGACTGAACTGTATGAAAGGTTTCACCAAAGGGCTTTGGTGAGAAATCCTTTGTTGCTTGAAGCCAACTATGTTTGtgaattaaagatgaaaaaagaaattgcCATTTTGTGGAAGCGAATCTTCAAAGATAACAGGTTATTTGTGTTCTCCGAGACGTTTTCAAGGCTCTTGGAAACCGTACAAATTGCAGGTGTTTGAATTAACGGTTTGCGTTTTCCCAAACATTAGAATTGTTAAGAATGGTGTAAAAAGGCTAGAAACGTTCATCTGACAAAGTATGCACACTTTGATCTCAAAATAGTAGATTAAATATATGTTCAGCTTCATTGTGCCAAAGTTTTGGAATGAGAATTTAAATATGATGGGCTTCATAGACAGATGTTCTGTTCAGACTTTTAATTGCAGTAGATAACATACAGTTAAAACTGATATACCTGTAAGGTAAGGTCTTCATCCATCTAgtcataaatgcaaaataaatcagGATGATCAGAGAGTATGATCACTTGACAGTATCATTGCCCTGCTTACTAGATGGTAACTTATCAAACTAAAACACTGCAACTATATTATTGCTATGTTTGTACTTGGTAAGTAGCCTG
>XM_043255533.1
CTCGATCTGAACCCTGCTGAAAACACCTGCGAGGAAAGAGACTATACGGTCCTCATCTTCAGTCAACGGAAAACAACATTTAGTTATTTCTGAAAGAGAGCGGAAAGACTGCAGAAAGCGCACGGGAAACAGCGATGGACAGGCGGATGATCTGCAATGGCCTCCACTAATGGCTTCAAGAAGGAATTAATATCGTTCTTTCACACCGGTGACCCGCATTTACCGCAGCTTTGTCAAAACACGTTCGAGCGCCCCTGCAACACAAtcagacaaaaagaaacaaatgagtGAAATTAGAGCAGCCTGAGGAAGCCGAGTCAAAACTGGCACAGATGCCAGGcttttttccactataaagtTCAGTGTTACCACAGAGGCGGTCTGCCTCATCATCCTCTGCCTTCTTATTATCTATCAGACTCCATTTAATGAGGCATCAGAAGACAGGCGCAAGCATGTACTTACTTCTAGTGTTTGCACTACAGGCCCTGTGGGTGAGTTGGTGTCACGCCACGCAGCATTACCCGGCCTCGTGGGGGCACTACGATGTTTGTAAGTCCCAGGTTTATGCAGAGGACCGCCTGGCCTGGCACTACATGGCCTGCCAGCCTGAGGCCACCGATATGACCAAATACCTGACCGTGTCTCTTGACCCACCCAACATTACCTGCGGAGACCCACCGGAGATGTACTGTGCCCTGGAAAACCCATATATGTGTAATAACGAATGCGACGCTGATACCGAAGAGCTGGCCCACCCGCCCGAACTCATGTTTGACTCCGAAGGACGAAACCCAACCACGTTCTGGCAGTCGACCTCCTGGAAGAAATACCCCAAGCCCCTTCAGGTCAACATCACGCTGTCCTGGAACAAAACAATAGAACTCACAGATGACATTGTCCTCACCTTCGAGTCCGGTCGACCCGAGCAGTTGGTCTTGGAGAAGTCGCTGGATTACGGCCGTACGTGGCAGCCGTATCAGTTTTACGCATCTGACTGTTTGGATGCCTTTACCATGGAGCCAAAAGCGGTACATCAGCTGACCCCAAGCACGATGCTAGAAATCATCTGCACTGAGGCCTATTCGACGGGCTACGTGTGGAAGTACGATAAGACTGTGCGTTTCGAGATTAAAGACCGCTTCGCCCTTCTCGCCGGCCCCAGACTGCACAACATGGCTTCTCTGTATGGGCAGCTGGACACCACCAAGAACCTAAGGGATTTCTTCACCCTCACTGACCTTCGCATTAGACTTCTACGGCCCGCCACCGGAGCCACAATGGTGGATGAAAACAACCTTTCAAGATACTTCTATGCTATCTCGGACATCAAAGTGCAGGGCAGGTGCAAGTGCAATCTGCATGCCAACAGCTGTGTTTTTGACAAAGGGAAGCTGGGGTGCGAGTGCGAGCACAACACCACAGGCCCGGATTGCGCACGCTGCAAGAGACACTACCAGGGCCGAGCCTGGAGCATGGGCTCCTACCTGCCCATCCCCAAGGGTACTGCCAATATCTGTATCCCGAACAATCTTGGGACCTCCGTTCGACCGAATGCTTCTTCTCTTGGAACAGCAAACCGAAATCAAGCTCGAGTGTGTGACAACGTGCTCCTGCGCTGTCAGAACGGTGGTGTGTGTCACCACCACCAGCGCTGCCAGTGTCCGGCCGGTTTCGGCGGCATACTGTGTGAGAAGGCCCAATGCCAGGGTGACTCTTGCGAGGATCTGCAATCCAGCCAGCCGTCTCTCCGCCCCCCGCCCACGGCCCAGACTCTCCCGCTGGCTCTTCTATCTCTCATCCCCTCCCTGCTGGCCACCCGGGGCCTTGCATCACTCTGAGGGGAATGCTTTCGCCCCAAAGACATTCTCCACGGGGGCTCCAATCATGACTTCCTGTTAGAGGACACGCGACGACTGAAAAGAAATGCTCCTTTGATGCGGGGGGGATAAAACGAAACATCTTTTTAGGAAAGCGTAAAGTTTTCTACTCAGTGCTATGTCAATTAATTTGCCAGAGATTATGGATAAACTGAGAAACTAAAAACTGCGTGAgaatttacaacaacaacaaaaaagaataacgtaaaaaaaaagctgacacTAATGACCGTCTTTGTCTTTGTTGAAAATGTTAGgaagaaatcaaatcaatacACTGTTACGATGCTCTGAAGCCATCCGTCAGATAAAACTTTATCTCAAGCCTCAGAGCGCAGAAACACtgcaatacaattttttttttggagacaAATCATCAATGTGAAGATGAATCAAGATGTACTTGTAGACTGCCACCTGAATTTACGCACACACCGCCACGACTGGTTGTCAAACTTCTCACACTTTACCTTTTCCTGaccctctctcttcttcttgtAACTCTGTGAAGTCATGTAAAAGACCAATGATGTATGTCACACAAGAATTGATCCAGATAATTCATTCAGAGCTGGTGTAagatcaaatatacagtaacatGAGAGACAACTGTTGACATTTTGTACTGGGATGTTTTCATGACGGTGAGAATTGGAACACGAAGAAATGCATCACTGCGACAAACCTGTAGAATTTGGATTGGTCCTTTATTGCCCTGATGAAGTTGAATATCTCTGTTCGGTTGCTAatctttttgcttaaaacatgCGTTTACATTCTCACCGACTGAACTGTATGAAAGGTTTCACCAAAGGGCTTTGGTGAGAAATCCTTTGTTGCTTGAAGCCAACTATGTTTGtgaattaaagatgaaaaaagaaattgcCATTTTGTGGAAGCGAATCTTCAAAGATAACAGGTTATTTGTGTTCTCCGAGACGTTTTCAAGGCTCTTGGAAACCGTACAAATTGCAGGTGTTTGAATTAACGGTTTGCGTTTTCCCAAACATTAGAATTGTTAAGAATGGTGTAAAAAGGCTAGAAACGTTCATCTGACAAAGTATGCACACTTTGATCTCAAAATAGTAGATTAAATATATGTTCAGCTTCATTGTGCCAAAGTTTTGGAATGAGAATTTAAATATGATGGGCTTCATAGACAGATGTTCTGTTCAGACTTTTAATTGCAGTAGATAACATACAGTTAAAACTGATATACCTGTAAGGTAAGGTCTTCATCCATCTAgtcataaatgcaaaataaatcagGATGATCAGAGAGTATGATCACTTGACAGTATCATTGCCCTGCTTACTAGATGGTAACTTATCAAACTAAAACACTGCAACTATATTATTGCTATGTTTGTACTTGGTAAGTAGCCTG

Function

NR:

description
PREDICTED: netrin-G1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255523.1 True 3448 mRNA 0.47 7 8944408 9000821
XM_043255533.1 False 3267 mRNA 0.46 7 8944408 9001261

Neighbor

gene id symbol gene type direction distance location
selenoj selj,LOC107569742,LOC107700519,LOC103360296,LOC104956575 coding downstream 54468 8886668 ~ 8889940 (-)
sh3glb1b sh3glb1b,LOC107700566,LOC107710622,LOC107578300,LOC107677816,LOC107732941,LOC107553268 coding downstream 58131 8879439 ~ 8886277 (-)
LOC122326319 ctdsplb,LOC107722544,LOC107688434,LOC107589830,LOC107585460,LOC107689397,LOC108435491,LOC108280637 coding downstream 136942 8795293 ~ 8807466 (-)
zgc:110269 zgc:110269,LOC107710602,LOC107732936,LOC107553249,LOC107569743,LOC107677938 coding downstream 314109 8626930 ~ 8630299 (-)
agfg1b agfg1b,LOC107710618,LOC107700562,LOC107732949,LOC107553264,LOC107569746 coding downstream 318136 8618514 ~ 8626272 (-)
amy2a amy2a,LOC107700520,LOC103353956 coding upstream 54462 9055723 ~ 9059102 (-)
arhgap29b arhgap29,LOC107745695,LOC107564532,LOC107680050 coding upstream 211198 9212459 ~ 9238949 (-)
f3b f3,LOC107730491,LOC107564531,LOC107680051 coding upstream 247339 9248600 ~ 9250969 (-)
cnn3b cnn3b,cnn3,LOC107680046,LOC107730489,LOC107570492 coding upstream 261933 9263194 ~ 9271097 (-)
dpydb dpyd,dpydb,LOC107677757,LOC107718148 coding upstream 344768 9346029 ~ 9446782 (-)
G10438 NA non-coding downstream 815 8943099 ~ 8943593 (-)
G10432 NA non-coding downstream 14325 8929490 ~ 8930083 (-)
G10400 NA non-coding downstream 145422 8798582 ~ 8798986 (-)
G10389 NA non-coding downstream 189263 8754849 ~ 8755145 (-)
G10345 NA non-coding downstream 313802 8630406 ~ 8630606 (-)
G10518 ptbp2,ptbp2b,LOC107570490,LOC107594658 non-coding upstream 326541 9327802 ~ 9331243 (-)
G10569 NA non-coding upstream 449299 9450560 ~ 9450926 (-)
G10562 NA non-coding upstream 455902 9457163 ~ 9461084 (-)
G10621 NA non-coding upstream 604377 9605638 ~ 9606195 (-)
G10708 NA non-coding upstream 747126 9748387 ~ 9748740 (-)
zfyve9a LOC107700554,LOC107563295,LOC107677579,LOC107553256,LOC107732202 other downstream 516504 8403327 ~ 8427904 (-)
G10213 NA other downstream 836620 8106856 ~ 8107788 (-)
G10196 NA other downstream 872574 8070776 ~ 8071834 (-)
G10178 NA other downstream 1159254 7784468 ~ 7785154 (-)
G10170 kdm4ab,LOC107564389,LOC107700543,LOC107551714,LOC107684932,LOC107743373 other downstream 1450564 7492206 ~ 7493844 (-)
abca4b abca4,abca4b,LOC107564534,LOC107680047,LOC107745690 other upstream 180795 9182056 ~ 9210041 (-)
plppr5a plppr5,plppr5a,LOC107722655,LOC107693754,LOC107677753,LOC107589876,LOC108441579,LOC107718169 other upstream 490302 9491563 ~ 9519781 (-)
si:ch211-267e7.3 si:ch211-267e7.3,LOC107722581,LOC107594654,LOC107718186,LOC107589917,LOC107677774,LOC107693699 other upstream 605062 9606323 ~ 9618473 (-)
hfm1 hfm1,LOC107722645,LOC107586144 other upstream 1078921 10080182 ~ 10095857 (-)
pkn2a pkn2,LOC107693716,LOC107585639,LOC107722607,LOC107718113,LOC107691687 other upstream 1118712 10119973 ~ 10139585 (-)

Expression


Co-expression Network