oprk1 (oprk1,LOC107586336,LOC107746918,LOC107664042,LOC107732559,LOC107558938)


Basic Information

Item Value
gene id oprk1
gene name oprk1,LOC107586336,LOC107746918,LOC107664042,LOC107732559,LOC107558938
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 14422236 ~ 14426212 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255729.1
ACGATGGACAGCAACGTGGTGCAGATTTTTAAGGAGGACAAATGCCCCTTATCGCACCCCGAGAAGTGTTTACCCAACTTCACGTGGCAGTCTGCTGTCTCGGACATTTATAACTATTCACTGAACGAAAGCTGGACGAACGAGCAGGAAACTATGTCTCCTATTATCCCGATCATCACTGCCGTGTATTCCGTAGTGTTTGTTGTAGGACTAGTGGGAAACTGCCTGGTGATGTATGTCATTATCAGatacactaaaatgaaaaccGCCACCAACATCTACATCTTCAACCTGGCTGTTGCGGATGCCTTGGTAACCACCACCATGCCTTTTCAAAGCACTGATTATCTGTTGAACTCGTGGCCATTTGGAGAGGTGGTGTGTAAGGTTTTCATCTCCATCGactactataacatgtttaCTAGTATCTTCACCTTGACCATGATGAGCGTGGACCGCTATGTGGCCGTCTGCCACCCCGTCAAGGCCCTGGACTTCCGGACGCCGATGAAAGCTAAGATCATCAACATCCTCATCTGGGTGCTGTCCTCGGCTGCTGGGATCCCTGCGATGGTTCTTGGGAGCACTCAAACAAACAACGGCACTACAGAATGTGCTCTACAGTTCCCAGACCCATATATCTACTGGGACACCTTGATGAAGATCTGCGTCTTCATCTTTGCCTTTGTAGCTCCTCTCCTCATTATCACGGTGTGCTACACGCTCATGGTCCTGCGTCTCAAGAGCGTCCGCCTGCTGTCGGGCTCCCGGGAGAAAGACCGCAACCTGAGACGCATCACCCGTCTAGTGCTGGTTGTGGTGGCTGTGTTTGTGGTGTGCTGGACGCCCATACACATCTTCATCCTAGTCAAAGCTCTTGCGCCAGGAGTGCCGGAGACCACTGCGGTCATGGCCGCCTACTTCTTCTGCGTGGCTCTGGGATACACCAACAGCAGCCTGAACCCCATCCTGTACGCGTTCCTGGATGAGAACTTTAAACGCTGCTTCAGGGACTTCTGCTGCCCGGGTCGGACCACGGGGGACGGCCACGGCGTCAGTCGGGTCAGAAGCACTCTTCGCGAGCACACGTGCCCAGCAGAGGCCAAAGGGGACAGGGGCCAAGGTCGACCCGTATGACTAGCCGTGGAGCTGTCGTCCTTTCCCGGTCGAGAGGACTCAAATGATCTGGGACTGACGCAGATCACCACCGCCATCTGAGGAAGAGATTGCACCCTTTTACGTTTAGAAAAACTATTGCTAGAGCAAAAAGGGATCttttagcaaaaacatttaCCCCCTCTCGCTCACGCAGGCTTTACCGGAAAATATATTGCCGTAAAAAATAGATCACGTGTGAACCggctctttttaaaaatatatgaatagcTGTTAAATTACTAGTAATTTGCCGGCAATGATGCTGTTTGTGAACGTGAAATGAAATTACGTATATGAGCATGTACGAGTTCTGGCGTGGAGGAAGCGTTTACTTTGCACTGTGTAGTTTGATTTGAAGTTGCCTAATATGATGTCCCTGGGCTTTCGGTAAATCTCGTCACTAAATTTATTGGTAATCTGAAAACGTTGCGTGAAAGGTGCTTTACCGGTTATAAAGACAGAACAGACGAAAGACTTGAGAACCGCACCTTTTAAATTTACTGGTATAGTTGTTTTACTGATATTACTctgtaaaaagcatttttatagtatgctataaaaaaaatatttaattacttacTGACATAATGTTAAAACACCAACCtgcttatattttaatgtatgttttatgcttttataatatgttgacaaccaccaaaaacacaaaaatggttCATGAGAACGCCACATGATGAATTAAAGCATATCACAGGCAACGTTTCCACTAGGcgttaatattaatttcaaatataataatgcagTAAACATTAATTTACCAACATAAAACCCCACTGTACATAACTTTTATTGAAAAAGGACAGTTATTTCAATCAAAAGCCATCAAATGTGAAGTGTTTATTAAGTTTTCTTCACTGTAAATGACAGgatcactttttatttgtaatgttttcacTCCcagctgtatatttattaactgttccagtattacagttttttttatatatagtaagGCTAATTAccattaagaaataaattttcctttaaa

Function

symbol description
oprk1 Enables peptide binding activity. Predicted to be involved in G protein-coupled opioid receptor signaling pathway; neuropeptide signaling pathway; and sensory perception of pain. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in neuron projection. Predicted to be integral component of plasma membrane. Is expressed in central nervous system. Orthologous to human OPRK1 (opioid receptor kappa 1).

NR:

description
PREDICTED: delta-type opioid receptor-like isoform X1

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0042277 peptide binding molecular_function
GO:0004985 opioid receptor activity molecular_function

KEGG:

id description
K04214 OPRK1; kappa-type opioid receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255729.1 True 2164 mRNA 0.44 3 14422236 14426212

Neighbor

gene id symbol gene type direction distance location
atp6v1h atp6v1h,LOC107664082,LOC107686042 coding upstream 11592 14380071 ~ 14410644 (+)
tcea1 tcea1,LOC107746907,LOC107664035,LOC107558928,LOC107732572,LOC107686041,LOC107584254 coding upstream 54146 14363921 ~ 14368090 (+)
si:dkey-94e7.2 si:dkey-94e7.2,LOC107686084,LOC107586344,LOC107732574,LOC107746919,LOC108440665,LOC108268141 coding upstream 70664 14348581 ~ 14351572 (+)
ankrd33bb ankrd33bb,LOC107550706,LOC107732577,LOC107686083,LOC107664029 coding upstream 148616 14262564 ~ 14273620 (+)
march6 march6,LOC107746911,LOC107686038,LOC107732575,LOC107664076 coding upstream 159822 14245255 ~ 14262414 (+)
chmp5a chmp5,LOC107732555,LOC107664100,LOC107558945,LOC107586329,LOC107686086,LOC107746917,LOC108440659 coding downstream 2719 14428931 ~ 14432593 (+)
bag1 bag1,LOC107746903,LOC107556611,LOC107732557,LOC107664079 coding downstream 6916 14433128 ~ 14436377 (+)
myom1a myom1a,LOC107686045,LOC107732591,LOC107664077,LOC107746915 coding downstream 13540 14439752 ~ 14461713 (+)
lpin2 lpin2,lipin2,LOC107686047,LOC107584234,LOC107664080 coding downstream 35701 14461913 ~ 14480848 (+)
yes1 yes1,LOC107713975,LOC107584194,LOC107686048,LOC107751567,LOC108437224 coding downstream 183542 14609754 ~ 14635684 (+)
G11895 rgs20,LOC107584260,LOC107746905 non-coding upstream 46486 14371918 ~ 14375750 (+)
G11894 NA non-coding upstream 50402 14369688 ~ 14371834 (+)
G11832 rpl7,LOC107664057,LOC107584398,LOC107686030,LOC107550715 non-coding upstream 236450 14136114 ~ 14185786 (+)
G11856 jph1b,LOC107686034,LOC107746914,LOC107550709,LOC107584332,LOC107732545,LOC107664083 non-coding upstream 255281 14108155 ~ 14166955 (+)
LOC122355240 NA non-coding downstream 69238 14495450 ~ 14497873 (+)
G11914 NA non-coding downstream 133648 14559860 ~ 14603545 (+)
G11917 NA non-coding downstream 210232 14636444 ~ 14636769 (+)
G11918 LOC107664027,LOC107713977,LOC107584165,LOC107556660 non-coding downstream 211377 14637589 ~ 14637805 (+)
G12135 fam134b,LOC107686060,LOC107664066,LOC107584095,LOC107751562,LOC107558208,LOC107713983 non-coding downstream 396949 14823161 ~ 14826945 (+)
G11854 jph1b,jph1,LOC107584332,LOC107550709,LOC107746914,LOC107732545,LOC107664083,LOC107686034,LOC107740042 other upstream 242621 14175364 ~ 14179615 (+)
rnf152 rnf152,LOC107729101,LOC107679332,LOC107567413,LOC107674343,LOC107714840,LOC107584540 other upstream 1548228 12867929 ~ 12874008 (+)
LOC122358236 NA other upstream 1795849 12623823 ~ 12626387 (+)
pld1a pld1a,LOC107688495,LOC107550602,LOC107680234,LOC107722545,LOC108442335 other upstream 2484646 11908073 ~ 11937590 (+)
mast3a LOC107722547,LOC107688474,LOC107680242,LOC107550619,LOC107709878,LOC107586070 other upstream 2914532 11482104 ~ 11507704 (+)
plxdc2a LOC107686089,LOC107713976,LOC107751571 other downstream 319895 14746107 ~ 14753161 (+)
ackr4a LOC107664061,LOC107751559,LOC107556724,LOC107751558,LOC107751560,LOC107713978,LOC107586293 other downstream 350110 14776322 ~ 14782977 (+)
LOC122357435 LOC107733881,LOC107599885,LOC107657419 other downstream 815585 15241797 ~ 15249249 (+)
dars2 dars2,LOC107720851,LOC107700987,LOC107558296,LOC107599907 other downstream 1433967 15860179 ~ 15875764 (+)
G12531 LOC107722077,LOC107568983 other downstream 1840831 16267043 ~ 16268797 (+)

Expression


Co-expression Network