LOC122356725 (LOC107698487,LOC107737400,LOC107679394,LOC107572992,LOC107728385,LOC107569271,LOC793909)


Basic Information

Item Value
gene id LOC122356725
gene name LOC107698487,LOC107737400,LOC107679394,LOC107572992,LOC107728385,LOC107569271,LOC793909
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 23765958 ~ 23770492 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255742.1
GTTTCTGTTAGCAAGGATGTGGTCACAGGCAAACCTCTGAAAACAGAAGTGCTACTAACTACAGTTTTCTTGATAGCATTTAAAGGAAAGTATCTCCTATGAGACACATCCTGATTTACTTCATGAGTGCATCACCACGGAAAAGTACAACCAGTTTCACTCTAGGAGAAATGACACTTTGAAGTCATCGGCGAAGTTTCACTATGATGCAGAACTGCTCAACTGAAGATGTGGACTCTTTGACTCGCACGCTGGACTTGGTGATTTACGTGCCCGTCCTGGTGTTCGGCTTAGCGTTAAACGTCGCTGCACTTGTGGTCTTCTGTCTGCTGCTCAGAAAATGGACAGAGTCCTCCATCTACATGACCAACCTGGCTCTGATGGacctgctgttgctgctgcagCTGCCCTTCAAAATGCACGCGGCACACCACGAGTGGGCAGAAGACAAGAAGATCTTTTGCTCCTTCCTGGAAAGTCTTTACTTTGTAGCTATGTACGGCAGCATCTACACCATCGTGTGCATAGCCGTAGACAGGTACATCGCAATAAACCACCCGTTCCGAGCCAAGCAGGTGCGTTCGAAAAAAAACGCCTTGATCGTTTGCGTTTGCATTTGGGTGTTCGTTATGGCAGCGACTTCACCGATCTACACCTTCCGGGAAGAGAAGAAGGGGGATTTCAACTGTTTCCATCGCTTTTCTGAAAAAGGTTGGAGCACTGAAATAATTGTGTGCCTGGAGGTCATTGGTTTCCTGTTGCCCGCCACAGTCCTGGTGACCTGTTCTATTAAGAGCGTGCGTACTCTCAAAGCCTCGAAGGACAGCGACCGGAAGAGGCAAGCCGGCGTGAGAATCATCTACAGCAGCCTAGCGGCCTTCCTAGTGCCCTTCACCCCCTGCCACCTGGCCATATTCCTGCAGTATCTTGTCCATAAAGCCATTATTTCAGACTgcaaacagaaacagaacatCGCCCTGTTCATCCAGGTGTCAATAAACATCGCAAACGTGACCTGCTGCTTGGACGCGTTGTGTTACTATTTCATTGCAAAGGAAGTCCGATCCACCAAGGAGACGCTCAGACTGTCCATCAGCAGAGCGAGAACCACCAGCTCCTCAGATGTCTGAGGTCAATTCAGTTTGTTGCTAGCGAAATTTTGCAGTCGAAAAAAAGCCCGTGGTCAACGTGCGAGGCTCACTAAAAAGTACCATTCAAGCCCAGCTGCTTTCTGTTGGCCAGCTCAGCAAATCCACAAGCCAACTTGAACCCACTGCAAAATCCAGAAATCTTCAAGCAATCGGAAGCAAGTGCACAGGTGCCGCGTACACTGTTACAATGTAGCGTTGCGTTGAATGCAACATTGCTACCGTGCAGaggaaaatgtacatttctgagGCTTGTTCATTTCCTTTTTGGTGAGGGCTTTTTACATTTGCCAAAAATAGAACTCTTTatcttcaaaacaaacaaagcgaGCTCAGACCAgattaaaaaagtaacacaaaagCAACGCATTAACAACACAATTAGGTACTTTTTAAGGAGCAACACAATACAGAATgcgttacttttaaaagtaacttcgCACACCACTGATTGTATTCTGTAGAAGAACtcacacaggtttgaaacgacgTGACGGTGAGAAAATTGTGACaggtattcattttttttggtggACTATACGGAACAGAACTGCACAATCCCAAAACTGGATTACCCGAATCTCATAACCTCAAATTTCATTCGCAAAATGGACGTCTAAATTCCATAAGACTGTCTATATGTTTATAGATAGCTGTCCTTCCTTAAAACCACATCCTTTAAGCTTCACCCTTCAAAGCCATGAATGCAAACACCCACAGAATACGATAACATCTGAGAGCATTTCTGGCTGGTTAAAATGGCGGGCTGCTCCCCGAcccatttttgctgtttttgagtTTAGGGCTATAAGAGAGACGGGTGATTTCTCTGTGATTTCTCAGGACTCCTTACGTTTGAAAAACGTACTATTAGAGTGTTGCGggaataaagtgtttttgtagGCCAAAACCTGAAGTCAgtggttttttttggttaattgTCCTGAAGTCAAGTTTTTGGTTAAATATGTCTTTGGTTAACACAAACTCAAGATATTTCTACGCTATTAAAGTGCATCGGCAAGACACCCGGAActtcttaaatatttaacttttccTGATAAAGGCGGTTGGCTAAGAGAACCGGGATATTAAAGTTAAACTCTTCTACTCACTAGTCTACTTTTACAGGTCCACAGGAAaggaaaatgtcttttaataaagaataaaagagTTATCTGAAGTATCATGCGACAGTGGTGTAGTTGTTTGataatgctgaataaaagaatGTAATGATGATAAGCTTTTTTTGGTCACAGaacatatttttcacattattcCGCTAGTCAATGGAATCTGGTTTTTATTGAGGAAACCAAGGCCTACAAAAACGTCATCACTGCAGCAGttcatttaaagttatttttagtcAAAATTGTGTCACACTTAAGACCGATTCATGATCTTGTGATAAGGATTTTGCCCAAAGATTCTGTATTTGTCTTATCTCATGCTTGTACTGTCATTATGAGAAACCTGAGGTCTTCATGCTCACACGCGATGGTCTTCTGACAAACCTTTCTGAAACCTTTACAATGACTCATAAATGTTTCTGATGTAACATTGGCTATGGCATTACTTTCTTCACAATCACCTGTCTTGTTCAGAGTTTTTCCAGTATGTTGACATATCTGTGTAGACTTTTCTCATCTGTTTGGTACTGGAtgtcaataaaacaat
>XM_043255751.1
GCAGACCAGACATGGTTTCGTGACAGATGCAGCCCACGTGTCTGAAAAAGGGGAAAGACTGTGGTTTATTGACATGCGTCTCGAAAAATATAGAAGTAGATGAAAAGTCAAAGAGGTTTAACGTTTGGCAAGAGGGAGGCTTAAATATTGGCTGTACTTCATAGATAATGGAGGAAGAAAAAAGTACATCCGCCAGTTTGTCCTGCTTAGGTCACATTTAACGGATTTTGTTCTTGTGGTTTATTGGTTTGCGAAAAAATTGCTGATCTTTGGCAGCAGAGCTACGACCTTCACAACGCATTTGTATGGGTGTTGTGAGAGGAACACAGATTTACTTCATGAGTGCATCACCACGGAAAAGTACAACCAGTTTCACTCTAGGAGAAATGACACTTTGAAGTCATCGGCGAAGTTTCACTATGATGCAGAACTGCTCAACTGAAGATGTGGACTCTTTGACTCGCACGCTGGACTTGGTGATTTACGTGCCCGTCCTGGTGTTCGGCTTAGCGTTAAACGTCGCTGCACTTGTGGTCTTCTGTCTGCTGCTCAGAAAATGGACAGAGTCCTCCATCTACATGACCAACCTGGCTCTGATGGacctgctgttgctgctgcagCTGCCCTTCAAAATGCACGCGGCACACCACGAGTGGGCAGAAGACAAGAAGATCTTTTGCTCCTTCCTGGAAAGTCTTTACTTTGTAGCTATGTACGGCAGCATCTACACCATCGTGTGCATAGCCGTAGACAGGTACATCGCAATAAACCACCCGTTCCGAGCCAAGCAGGTGCGTTCGAAAAAAAACGCCTTGATCGTTTGCGTTTGCATTTGGGTGTTCGTTATGGCAGCGACTTCACCGATCTACACCTTCCGGGAAGAGAAGAAGGGGGATTTCAACTGTTTCCATCGCTTTTCTGAAAAAGGTTGGAGCACTGAAATAATTGTGTGCCTGGAGGTCATTGGTTTCCTGTTGCCCGCCACAGTCCTGGTGACCTGTTCTATTAAGAGCGTGCGTACTCTCAAAGCCTCGAAGGACAGCGACCGGAAGAGGCAAGCCGGCGTGAGAATCATCTACAGCAGCCTAGCGGCCTTCCTAGTGCCCTTCACCCCCTGCCACCTGGCCATATTCCTGCAGTATCTTGTCCATAAAGCCATTATTTCAGACTgcaaacagaaacagaacatCGCCCTGTTCATCCAGGTGTCAATAAACATCGCAAACGTGACCTGCTGCTTGGACGCGTTGTGTTACTATTTCATTGCAAAGGAAGTCCGATCCACCAAGGAGACGCTCAGACTGTCCATCAGCAGAGCGAGAACCACCAGCTCCTCAGATGTCTGAGGTCAATTCAGTTTGTTGCTAGCGAAATTTTGCAGTCGAAAAAAAGCCCGTGGTCAACGTGCGAGGCTCACTAAAAAGTACCATTCAAGCCCAGCTGCTTTCTGTTGGCCAGCTCAGCAAATCCACAAGCCAACTTGAACCCACTGCAAAATCCAGAAATCTTCAAGCAATCGGAAGCAAGTGCACAGGTGCCGCGTACACTGTTACAATGTAGCGTTGCGTTGAATGCAACATTGCTACCGTGCAGaggaaaatgtacatttctgagGCTTGTTCATTTCCTTTTTGGTGAGGGCTTTTTACATTTGCCAAAAATAGAACTCTTTatcttcaaaacaaacaaagcgaGCTCAGACCAgattaaaaaagtaacacaaaagCAACGCATTAACAACACAATTAGGTACTTTTTAAGGAGCAACACAATACAGAATgcgttacttttaaaagtaacttcgCACACCACTGATTGTATTCTGTAGAAGAACtcacacaggtttgaaacgacgTGACGGTGAGAAAATTGTGACaggtattcattttttttggtggACTATACGGAACAGAACTGCACAATCCCAAAACTGGATTACCCGAATCTCATAACCTCAAATTTCATTCGCAAAATGGACGTCTAAATTCCATAAGACTGTCTATATGTTTATAGATAGCTGTCCTTCCTTAAAACCACATCCTTTAAGCTTCACCCTTCAAAGCCATGAATGCAAACACCCACAGAATACGATAACATCTGAGAGCATTTCTGGCTGGTTAAAATGGCGGGCTGCTCCCCGAcccatttttgctgtttttgagtTTAGGGCTATAAGAGAGACGGGTGATTTCTCTGTGATTTCTCAGGACTCCTTACGTTTGAAAAACGTACTATTAGAGTGTTGCGggaataaagtgtttttgtagGCCAAAACCTGAAGTCAgtggttttttttggttaattgTCCTGAAGTCAAGTTTTTGGTTAAATATGTCTTTGGTTAACACAAACTCAAGATATTTCTACGCTATTAAAGTGCATCGGCAAGACACCCGGAActtcttaaatatttaacttttccTGATAAAGGCGGTTGGCTAAGAGAACCGGGATATTAAAGTTAAACTCTTCTACTCACTAGTCTACTTTTACAGGTCCACAGGAAaggaaaatgtcttttaataaagaataaaagagTTATCTGAAGTATCATGCGACAGTGGTGTAGTTGTTTGataatgctgaataaaagaatGTAATGATGATAAGCTTTTTTTGGTCACAGaacatatttttcacattattcCGCTAGTCAATGGAATCTGGTTTTTATTGAGGAAACCAAGGCCTACAAAAACGTCATCACTGCAGCAGttcatttaaagttatttttagtcAAAATTGTGTCACACTTAAGACCGATTCATGATCTTGTGATAAGGATTTTGCCCAAAGATTCTGTATTTGTCTTATCTCATGCTTGTACTGTCATTATGAGAAACCTGAGGTCTTCATGCTCACACGCGATGGTCTTCTGACAAACCTTTCTGAAACCTTTACAATGACTCATAAATGTTTCTGATGTAACATTGGCTATGGCATTACTTTCTTCACAATCACCTGTCTTGTTCAGAGTTTTTCCAGTATGTTGACATATCTGTGTAGACTTTTCTCATCTGTTTGGTACTGGAtgtcaataaaacaat

Function

NR:

description
PREDICTED: G-protein coupled receptor 55-like

GO: NA

KEGG:

id description
K08413 GPR55; G protein-coupled receptor 55

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255742.1 False 2831 mRNA 0.43 3 23765958 23770492
XM_043255751.1 True 3047 mRNA 0.43 3 23766371 23770492

Neighbor

gene id symbol gene type direction distance location
trnaw-cca_1 NA coding upstream 28836 23737051 ~ 23737122 (+)
pitrm1 pitrm1,LOC107698483,LOC107679400,LOC107724807 coding upstream 50721 23703501 ~ 23715237 (+)
klf6b klf6,LOC107698482,LOC107679408,LOC107572997,LOC107724813,LOC107569266,LOC107728392 coding upstream 63694 23698257 ~ 23702264 (+)
LOC122354999 NA coding upstream 128528 23634222 ~ 23637430 (+)
LOC122354760 NA coding upstream 135585 23625007 ~ 23630373 (+)
lpar5a LOC107737401,LOC107698486,LOC107572991,LOC107679392,LOC107728381,LOC107569267 coding downstream 2388 23772880 ~ 23775183 (+)
hes6 hes6,LOC107737402,LOC107572989,LOC107728379,LOC107569265,LOC107679391 coding downstream 13232 23783724 ~ 23786255 (+)
LOC122323665 NA coding downstream 149739 23920231 ~ 23925631 (+)
LOC122323657 NA coding downstream 159139 23929631 ~ 23931889 (+)
LOC122328481 LOC107599284 coding downstream 224691 23995183 ~ 23997150 (+)
G14859 NA non-coding upstream 3133 23719642 ~ 23762825 (+)
G14872 NA non-coding upstream 19405 23744871 ~ 23746553 (+)
G14860 NA non-coding upstream 43211 23722266 ~ 23722747 (+)
G14841 NA non-coding upstream 74098 23690422 ~ 23691860 (+)
G14850 LOC107724821,LOC107698475,LOC107573003,LOC107709797,LOC107680183,LOC107577770 non-coding upstream 82560 23668563 ~ 23683398 (+)
G14889 NA non-coding downstream 6611 23777103 ~ 23780120 (+)
G14863 LOC107728390,LOC107572994,LOC107737392,LOC107569272 non-coding downstream 20770 23791262 ~ 23795903 (+)
G14896 per2,LOC107572994,LOC107698490 non-coding downstream 33292 23803784 ~ 23804629 (+)
G14978 NA non-coding downstream 108686 23879178 ~ 23879604 (+)
G14979 NA non-coding downstream 113270 23883762 ~ 23884416 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other upstream 217984 23545106 ~ 23547974 (+)
LOC122324535 NA other upstream 760704 23003165 ~ 23005254 (+)
fcer1gl LOC107671799 other upstream 1070628 22691199 ~ 22695330 (+)
LOC122327931 NA other upstream 1091683 22633529 ~ 22674275 (+)
LOC122327302 LOC107705949,LOC107599389,LOC107675701,LOC107737183,LOC107661566,LOC107586444,LOC107679834,LOC107719545,LOC107717972 other upstream 1280303 22461916 ~ 22485655 (+)
LOC122323670 NA other downstream 165429 23935921 ~ 23939016 (+)
LOC122327416 LOC107728372,LOC107569261,LOC107681443 other downstream 275193 24045685 ~ 24048465 (+)
LOC122327425 LOC107728372,LOC107569261,LOC107681443 other downstream 288920 24059412 ~ 24062202 (+)
LOC122327442 LOC107549368,LOC107569260,LOC107737397,LOC107681447,LOC107681444 other downstream 313346 24083838 ~ 24096897 (+)
abhd17aa abhd17aa,LOC107599293,LOC107757810,LOC107698472,LOC107600230,LOC108433103,LOC105904035,LOC108280794 other downstream 471380 24241872 ~ 24249991 (+)

Expression


Co-expression Network