G593


Basic Information

Item Value
gene id G593
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 1733247 ~ 1734389 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU702
AGCGTTTTTGCATGACCATCAAGATCAATAGACCTGCAACAACCAGAAGAAGCTAAACAGGGAGGCTTAAAGCAGCAAAAAATAAATAAATATATATATATATATTTTAAATCACTCTGAGTCACAGCCTGCCAAAATGTGAAAATTCAGGGCACCACTCCATGTTTCTGCCACTCATCTGGCCTTCCAGCATCACACTTTGACTTGCAAGAGACCTGTCATTAAAAAAAAAAAAAGAAAGAACTACAGGAATGACACTGTTTTACCCCTCTCCTGCTTCCTCTGCCCCGTCTGTTCCTGTCAGCAAAGACTCAGAGATCCAGGTTCACAGGAAGTAAGGTGACAGGCTCTGACACACGGCCTCTCCAGCGTGTTTGTGCCGCAGTTCCTGACTGAATATGTGTGTGTGCCATCATGCTCGCCGGGTTTGTGGGTGCTGTCAGAGCCCAGCATATTGTGCAACAAGACGCTATTTTGCCAAAGACAGAAGAGAAGATGACACAAGGTGGGGGGTCTTTTCTCAGCACAGGGGTCTGTTCTCAGGCCTGGGGCTTTGCGAGTGTACAAACAGGGAGCTGACAGTGAAATGACTCAGACTCTGCCTGTGTTAACAAGCAATCTGGAGGTCCTCCTTAGCAGCAATACAAACAGAGAAAACTCTCATTTAACTCCTGATTAGACCCCCTGATTCCCAACAATGTCACGCTGGGAGGCTGCAGATAATTGTGGGTCAATCACAGCACAGGACATCTAAAAATACAGCTTCACCACCAGCCTCTGATGCTGACATTCAGGCTGAGCGTGTCGTGAAGAAGCTTGAGCTCTGGTGCCAGGTGGCTCAATAAGGATCCAGGAAAAGTTGAGAGAGCCATGGAGACACCGGGGGTTGGTTTCTTCCCACCGGCAGACAGGGAACGTTGTCCATCTGTCTCTCAGAGAGACAGAAGCAGCATGGCACAACACTACAGAAAGGCCATGGGATAATGAGCGTAGATGTATAGAAACTTTTATAAGGAAAGACAGGATTTGCTCACAGGTCTGAGATATAGGGACTAGTTGTCACATTTTTTTCTGTATTGGTACATATCATAAAGTCTACAAAAAAAGAAAAGCTATTTCCACCATTATTGCTGCCCCAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU702 True 1143 lncRNA 0.43 1 1733247 1734389

Neighbor

gene id symbol gene type direction distance location
CI01000000_01680507_01690297 CPLX2, CPLX1, CPLX1.L coding upstream 42053 1680507 ~ 1691194 (+)
CI01000000_01511690_01517631 IKBKAP coding upstream 215528 1511690 ~ 1517719 (+)
CI01000000_01459294_01485147 SLC44A1 coding upstream 247936 1459294 ~ 1485311 (+)
CI01000000_01405606_01410241 NIPSNAP3A coding upstream 322744 1405606 ~ 1410503 (+)
CI01000000_01347674_01352321 NA coding upstream 380019 1347674 ~ 1353228 (+)
CI01000000_01848610_01851296 NA coding downstream 113154 1847543 ~ 1851898 (+)
CI01000000_01879407_01879559 NA coding downstream 145018 1879407 ~ 1879980 (+)
CI01000000_01898604_01899281 NA coding downstream 163653 1898042 ~ 1899281 (+)
CI01000000_01899373_01901550 TSTD2 coding downstream 164984 1899373 ~ 1901682 (+)
CI01000000_01916310_01925119 NA coding downstream 181663 1916052 ~ 1925390 (+)
G576 NA non-coding upstream 26262 1706770 ~ 1706985 (+)
G428 NA non-coding upstream 242900 1487224 ~ 1490347 (+)
G520 NA non-coding upstream 329113 1403153 ~ 1404134 (+)
G503 NA non-coding upstream 338627 1394342 ~ 1394620 (+)
G579 NA non-coding downstream 33528 1767917 ~ 1908808 (+)
G645 NA non-coding downstream 107933 1842322 ~ 1843168 (+)
G699 NA non-coding downstream 184343 1918732 ~ 1918942 (+)
G700 NA non-coding downstream 184867 1919256 ~ 1919564 (+)
G710 NA non-coding downstream 289372 2023761 ~ 2023971 (+)
G435 NA other upstream 300393 1425121 ~ 1432854 (+)
G350 NA other upstream 1056310 671842 ~ 676937 (+)
G252 NA other upstream 1226175 503209 ~ 507072 (+)
G2774 NA other downstream 2719389 4453778 ~ 4454232 (+)
G2850 NA other downstream 2991597 4725986 ~ 4726482 (+)
G6811 NA other downstream 8470442 10204831 ~ 10321679 (+)
G6820 NA other downstream 8692834 10427223 ~ 10433018 (+)

Expression


Co-expression Network