olfm3b (olfm3b,LOC107700521,LOC107710604,LOC107745696,LOC107680049)


Basic Information

Item Value
gene id olfm3b
gene name olfm3b,LOC107700521,LOC107710604,LOC107745696,LOC107680049
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 9162611 ~ 9171915 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043256064.1
GTCTCCACACATCTCTCAAACTTTTCTGCGCCCGGAGCGACGATGACAGCGCACGCACTTTCAGCGGCTCCATCGAGGATATCCGATCCCAAGATACTGACAAGGAGCTCGATCTGAAAGCTCGGAGAGAGAGAAGCGGGTTGCAAGAGAGACGTAGGCGGGAGACTGGAGGCAGAATGCGGGCGCTGATCGTGGTGCTGAAACCGCTGTGTTTTCTCGCTCTGCTCGGCTACTGCCCTTCCGCGACCATCAGACCAAAGGAGGGCTGGCAGGTGTACAGTTCAGCGCAGGATGCCGACGGCCGCTGCATCTGTACAGTGGTGGCACCAGAACAGAACCTGTGCTCCAGAGACGCAAAGAGCAGACAGCTCCGCCAGCTACTGGAGAAGATTCAGAACATGTCGCAATCAATCGAAGTGCTGAACCTGAGGACCCAGAGGGACTTCCAGTATGTCATGAAAATGGAGAGCCAGATGAAAGGACTCCGATCAAAGTTCAGACAAATCGAGTCGAACCGAAGAACATTATTGACTAAAAACTTTCAGGAGCTGAAGGGGAAGATGAACGAACTGCAGCCGCTGATTCCAGTGCTGGAGCAGTACAAGACTGACGCCACGCTCATATCTCAGTTCAAGGAGGAGATCAGGAACCTGTCTCTGGTGCTGATTGCTATCCAGGAGGAGATAGGAGCGTACGATTACGAGGAGCTCCAGCAAAGGGTCTTCGGCTTGGAGGGAAGACTGAGGAACTGTATGAACAAACTCACGTGTGGTAAGTTGATGAAAATCACGGGCCCCATCACTGTAAAGACATCAGGAACGAGGTTTGGAGCTTGGATGACAGACCCTCAGGCTTCACCTAAGAACAACAAGGTCTGGTACATGGACAGCTATACAAACAACAAGATCGTCCGTGAGTACAAATCGGTAAGCGACTTTGTGTCTGGCGTGGAGTCAAGAACCTACAACCTTCCGTTCAGCTGGGCCGGAACTAATCATGTGGTCTACAACGGCTCCCTTTACTACAACAAATACCGGAGCAACATCATTGTCAGGTACAGCTTTGAAAGCGGCCGGGTTATGACCCAACGAGCTCTCGAGTCCGCCGGCTTCCACAACGTCTACCCATACAGCTGGGGCGGATTCTCAGACATTGACCTGATGGCCGACGAGCTCGGTTTGTGGGCCATCTATGCCACCAATCAGAATGCAGGGAATGTAGTGATCAGCCAGCTGGACCCTCTGACCATCCAGGTGCTGAACTCTTGGAACACAGAGTACTCCAAACGAAACGCGGGTGAGTCCTTCATGATCTGCGGCACACTGTACATCACCAACTCCCACATGACCGGTGCTAAGGTATACTTCTCATACTCCACCAAAACCTCTACCTACGAGTACATGGACATCCCCATCCACAACCAGTACTTTCACATGTCCATGCTGGATTACAACGCCAGGGATCGTGCACTTTACGGCTGGAACAATGGCCACCAGGTACTGTTCAACGTCACGCTGTTCCACATTATTAAAACCGACGACGAATCCTGAGGGATCTACCCTGAGGTGAGAGGAAAACTTTGATTTCACAGTTACACTGATCTGTAATCGCCGTAGTATTGCTGTGAAATAAtaggttttatatatttcaatcaAAAGAGGTTCAGTTTGAGGTTCAGTGCCTCTGGAGATGTCAGTCAGCATTGCACTCCTCCATCTGTAAAACAATCATGATTAAACTCAAACTCAGACTCAGATAAGGACAGTTTAAAGctctatttaaatgttgtttgtgcAACTTCCAGTGCGTAGCAGTGGTGTTCAGCTATAATGCTCGATTCTGCAAAGAATGTAACAAACACTTTTAACTAAACTTAGAAACATTCAATGATAAATCCTTATTATATACTTATCTATCAAATTGTGTCTCTTAGTTTTAGCTTGTCAAATGTTTAGAGGagtatgaatatattttcagctaTTTTCTGACTtacttaaaggaatggttcacccaaaaataaacattggtcattatttactcatctttGTGTTGATCCAAAACTTTGTGGCATTTGTGTGGAACACCAGAAAATATCTACACAATGGACATCAATAGGCTCCAAAATATTTTGGGTCCCagtatcttttaaaatattttctttcatgaaacaaacaaatttagggtgagtaaatgttacagaattctcatttttgggtaaaaGTACCCTTCCATGCTGAAATTATTTCCCATTGTACAatctaattacaataaaaaatactttagagGTT
>XM_043256072.1
GTCTCCACACATCTCTCAAACTTTTCTGCGCCCGGAGCGACGATGACAGCGCACGCACTTTCAGCGGCTCCATCGAGGATATCCGATCCCAAGATACTGACAAGGAGCTCGATCTGAAAGCTCGGAGAGAGAGAAGCGGGTTGCAAGAGAGACGTAGGCGGGAGACTGGAGGCAGAATGCGGGCGCTGATCGTGGTGCTGAAACCGCTGTGTTTTCTCGCTCTGCTCGGCTACTGCCCTTCCGCGACCATCAGACCAAAGGAGGGCTGGCAGGTGTACAGTTCAGCGCAGGATGCCGACGGCCGCTGCATCTGTACAGTGGTGGCACCAGAACAGAACCTGTGCTCCAGAGACGCAAAGAGCAGACAGCTCCGCCAGCTACTGGAGAAGATTCAGAACATGTCGCAATCAATCGAAGTGCTGAACCTGAGGACCCAGAGGGACTTCCAGTATGTCATGAAAATGGAGAGCCAGATGAAAGGACTCCGATCAAAGTTCAGACAAATCGAGTCGAACCGAAGAACATTATTGACTAAAAACTTTCAGGAGCTGAAGGGGAAGATGAACGAACTGCAGCCGCTGATTCCAGTGCTGGAGCAGTACAAGACTGACGCCACGCTCATATCTCAGTTCAAGGAGGAGATCAGGAACCTGTCTCTGGTGCTGATTGCTATCCAGGAGGAGATAGGAGCGTACGATTACGAGGAGCTCCAGCAAAGGGTCTTCGGCTTGGAGGGAAGACTGAGGAACTGTATGAACAAACTCACGTGTGGTAAGTTGATGAAAATCACGGGCCCCATCACTGTAAAGACATCAGGAACGAGGTTTGGAGCTTGGATGACAGACCCTCAGGCTTCACCTAAGAACAACAAGGTCTGGTACATGGACAGCTATACAAACAACAAGATCGTCCGTGAGTACAAATCGGTAAGCGACTTTGTGTCTGGCGTGGAGTCAAGAACCTACAACCTTCCGTTCAGCTGGGCCGGAACTAATCATGTGGTCTACAACGGCTCCCTTTACTACAACAAATACCGGAGCAACATCATTGTCAGGTACAGCTTTGAAAGCGGCCGGGTTATGACCCAACGAGCTCTCGAGTCCGCCGGCTTCCACAACGTCTACCCATACAGCTGGGGCGGATTCTCAGACATTGACCTGATGGCCGACGAGCTCGGTTTGTGGGCCATCTATGCCACCAATCAGAATGCAGGGAATGTAGTGATCAGCCAGCTGGACCCTCTGACCATCCAGGTGCTGAACTCTTGGAACACAGAGTACTCCAAACGAAACGCGGGTGAGTCCTTCATGATCTGCGGCACACTGTACATCACCAACTCCCACATGACCGGTGCTAAGGTATACTTCTCATACTCCACCAAAACCTCTACCTACGAGTACATGGACATCCCCATCCACAACCAGTACTTTCACATGTCCATGCTGGATTACAACGCCAGGGATCGTGCACTTTACGGCTGGAACAATGGCCACCAGGTACTGTTCAACGTCACGCTGTTCCACATTATTAAAACCGACGACGAATCCTGAGGGATCTACCCTGAGGAACATTCGCGCATCTTGTTTGACTTCTCATCTTCAGTGACGAGTGACAGCTCTAGTCTGACGAATGCAATTTCACTTCAGTCAACACATCTCTCCAGGCCCCTGATTCACGGTAACATAATTCAGCAGAGTGAGAATAAGTACGTTTATGTAAgggataatgtacagtcagcCGGGCATAATCGCAAAGTAAACCCTGACAGAAGGATCTCAGGATCAGGACTTGTATCCTTCTAGATCCTGTCTGGGTTTCATTTGCTCTATATTGTATATTGCTCTGTTTTTGCATATAACGGAACGAAAACGATTGGTTTTGGTGTTTATTAAACAGTGTTTGACCCATCAGAAGCTGTGTAATAATTAGGAGGGTGACATAAAGTTCTGCGTAGATATATTATCTCGTTCTCTTTTAGTTTTCCTAAGTTCACGATCAGTCAAAAAGCTTTTAGTTCCTGAGAGGAGTCGAGATGTGCTGACACTTAAATATTCAGCAGCTTTCAGCAAATTAACAATTACACAATTACCACCGCAGGTGTGTATATTAGAAATGATTTCCTTCCTAGTGCCATATGTAAtcaaatttaatgttttaataccGTCTGAAGTGCCTCAAAAAACTTTATACAAAACGTAATGCTTCTTATTCTACCAGCTCTTAGGAAATCAATGACGTTACATTTATCA
>XR_006252402.1
GTCTCCACACATCTCTCAAACTTTTCTGCGCCCGGAGCGACGATGACAGCGCACGCACTTTCAGCGGCTCCATCGAGGATATCCGATCCCAAGATACTGACAAGGAGCTCGATCTGAAAGCTCGGAGAGAGAGAAGCGGGTTGCAAGAGAGACGTAGGCGGGAGACTGGAGGCAGAATGCGGGCGCTGATCGTGGTGCTGAAACCGCTGTGTTTTCTCGCTCTGCTCGGCTACTGCCCTTCCGCGACCATCAGACCAAAGGAGGGCTGGCAGGTGTACAGTTCAGCGCAGGATGCCGACGGCCGCTGCATCTGTACAGTGGTGGCACCAGAACAGAACCTGTGCTCCAGAGACGCAAAGAGCAGACAGCTCCGCCAGCTACTGGAGAAGATTCAGAACATGTCGCAATCAATCGAAGTGCTGAACCTGAGGACCCAGAGGGACTTCCAGTATGTCATGAAAATGGAGAGCCAGATGAAAGGACTCCGATCAAAGTTCAGACAAATCGAGTCGAACCGAAGAACATTATTGACTAAAAACTTTCAGGAGCTGAAGGGGAAGATGAACGAACTGCAGCCGCTGATTCCAGTGCTGGAGCAGTACAAGACTGACGCCACGCTCATATCTCAGTTCAAGGAGGAGATCAGGAACCTGTCTCTGGTGCTGATTGCTATCCAGGAGGAGATAGGAGCGTACGATTACGAGGAGCTCCAGCAAAGGGTCTTCGGCTTGGAGGGAAGACTGAGGAACTGTATGAACAAACTCACGTGTGGTAAGTTGATGAAAATCACGGGCCCCATCACTGTAAAGACATCAGGAACGAGGTTTGGAGCTTGGATGACAGACCCTCAGGCTTCACCTAAGAACAACAAGGTCTGGTACATGGACAGCTATACAAACAACAAGATCGTCCGTGAGTACAAATCGGTAAGCGACTTTGTGTCTGGCGTGGAGTCAAGAACCTACAACCTTCCGTTCAGCTGGGCCGGAACTAATCATGTGGTCTACAACGGCTCCCTTTACTACAACAAATACCGGAGCAACATCATTGTCAGGTACAGCTTTGAAAGCGGCCGGGTTATGACCCAACGAGCTCTCGAGTCCGCCGGCTTCCACAACGTCTACCCATACAGCTGGGGCGGATTCTCAGACATTGACCTGATGGCCGACGAGCTCGGTTTGTGGGCCATCTATGCCACCAATCAGAATGCAGGGAATGTAGTGATCAGCCAGCTGGACCCTCTGACCATCCAGGTGCTGAACTCTTGGAACACAGAGTACTCCAAACGAAACGCGGGTGAGTCCTTCATGATCTGCGGCACACTGTACATCACCAACTCCCACATGACCGGTGCTAAGGTATACTTCTCATACTCCACCAAAACCTCTACCTACGAGTACATGGACATCCCCATCCACAACCAGTACTTTCACATGTCCATGCTGGATTACAACGCCAGGGATCGTGCACTTTACGGCTGGAACAATGGCCACCAGGTACTGTTCAACGTCACGCTGTTCCACATTATTAAAACCGACGACGAATCCTGAGGGATCTACCCTGAGGAACATTCGCGCATCTTGTTTGACTTCTCATCTTCAGTGACGAGTGACAGCTCTAGTCTGACGAATGCAATTTCACTTCAGTCAACACATCTCTCCAGGCCCCTGATTCACGCAGGCAGCCAGAGATGCGGACtttgaagaagaaaatgaagggggaaagagagagagagccaaaAAAGAGAGGCGCAGTGAGCAAAGCTGAGTAAATGGACTTAAGTTCCTGCGTGCGAGCAGCAGGCCTGTGGGTGTTGCAGGCGTATGAGGTTGAGTCAGCTCTCAGGTGGACTGTCAGAGTGATTGGGTCTGAATGCATTAGACGTGGTGAAATGAGAAAGATGCCGTGTCACATTGCTCAGAATATGCATCTATTAGCTTTCAGATGCATATGAACTGCGAAAAACTGTGTCAGTGGCTGTGCGCAGCCATTTGTTATGTTATCCTTTGGTTGAAGACGCGCgcgcatatatgtatgtatatgtatgtattatatatttattgctgTTAGCAAGATATAGAGATTAACACTACCATTAACATATATAATTctatttggtcccactttatattaagtggccttgaCTA

Function

symbol description
olfm3b Predicted to be located in extracellular region and synapse. Orthologous to human OLFM3 (olfactomedin 3).

NR:

description
PREDICTED: noelin-3-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043256064.1 True 2288 mRNA 0.46 6 9162611 9169785
XM_043256072.1 False 2249 mRNA 0.48 7 9162611 9170967
XR_006252402.1 False 2147 transcript 0.50 8 9162611 9171915

Neighbor

gene id symbol gene type direction distance location
col11a1b col11a1b,LOC107680048,LOC107594685,LOC107710593,LOC107564536,LOC107700498,LOC107745694 coding upstream 8177 9087694 ~ 9154434 (+)
vav3b vav3b,LOC107700567,LOC107732951,LOC107677852,LOC107553269 coding upstream 233301 8890773 ~ 8929310 (+)
LOC122359011 arhgef4,LOC107700563,LOC107710620,LOC107553266,LOC107732940 coding upstream 284511 8848327 ~ 8878100 (+)
LOC122361595 LOC107710620 coding upstream 320877 8830820 ~ 8841734 (+)
amer3 LOC107710619,LOC107700565,LOC107677756,LOC107732953,LOC107553265,LOC107569737 coding upstream 500288 8651917 ~ 8662323 (+)
tecrl2b tecrl2b,LOC107564537,LOC107745691 coding downstream 1938 9173853 ~ 9180307 (+)
abcd3b abcd3b,abcd3,LOC107564533,LOC107730494,LOC107680052,LOC106590647 coding downstream 67717 9239632 ~ 9248291 (+)
si:dkey-10f21.4 tmem56,si:dkey-10f21.4,LOC107710631,LOC107730492,LOC107570488 coding downstream 83470 9255385 ~ 9277476 (+)
LOC122324815 hccsa.1,LOC107594665,LOC107710606,LOC107700523 coding downstream 105848 9277763 ~ 9281294 (+)
rwdd3 rwdd3 coding downstream 109440 9281355 ~ 9285672 (+)
G10446 amy2a,LOC107700520,LOC107594668,LOC105896008 non-coding upstream 104752 9057090 ~ 9057859 (+)
G10445 NA non-coding upstream 106366 9055723 ~ 9056245 (+)
G10433 NA non-coding upstream 221425 8939969 ~ 8941186 (+)
G10431 NA non-coding upstream 232538 8929504 ~ 8930073 (+)
G10374 NA non-coding upstream 282158 8879942 ~ 8880453 (+)
G10466 NA non-coding downstream 43590 9215505 ~ 9216664 (+)
G10557 NA non-coding downstream 282451 9454366 ~ 9454745 (+)
G10571 NA non-coding downstream 314262 9486177 ~ 9572793 (+)
G10581 LOC107722512,LOC107693701,LOC107594678 non-coding downstream 405256 9577171 ~ 9577406 (+)
G10604 NA non-coding downstream 430451 9602366 ~ 9603843 (+)
G10212 NA other upstream 1054834 8106865 ~ 8107777 (+)
G10108 NA other upstream 1580226 7504622 ~ 7582385 (+)
gng12a gng12a,LOC107700509,LOC107716954,LOC107551713 other upstream 1862510 7285670 ~ 7300101 (+)
lrrc53 LOC107700485,LOC107588905,LOC107716924 other upstream 2056819 7098303 ~ 7105792 (+)
G9925 LOC107563058,LOC107549254 other upstream 2175492 6986298 ~ 6987119 (+)
arpc5a arpc5a,arpc5,LOC107722639,LOC107693740,LOC107564704,LOC107677751,LOC107718183 other downstream 574655 9746570 ~ 9751212 (+)
znf414 LOC107722538,LOC107564712,LOC107693731,LOC107691619,LOC107718126 other downstream 739713 9911628 ~ 9916861 (+)
selenof selenof,sep15,LOC107693704,LOC106598901 other downstream 986617 10158532 ~ 10161809 (+)
lyrm4 lyrm4,LOC107718092,LOC107688446,LOC107722638,LOC107689406,LOC107688520 other downstream 1490814 10662729 ~ 10665110 (+)
G10979 LOC107722568,LOC107585289,LOC107688450,LOC107718087,LOC107689412 other downstream 1539215 10711130 ~ 10718194 (+)

Expression


Co-expression Network