LOC122357116


Basic Information

Item Value
gene id LOC122357116
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 19622041 ~ 19625338 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043256351.1
ACCGACACACTGAAACCTGATGTCTGTACCCCTCCCCTGCCTTGTGTTGAGAGCTAGATATGGTGTAAAACGTATTCAAAGTGGTCTTATTGTATTCCTCCAATTAAGTTGTTATTGTCAGTGTTAAACTACATGCCTCTTTGTACTGGAAGGTGGAGGAAGACCCTTATATCTGGGACGTAACAACACCACGGtaaaacatatataAAAGTGTTCAGGGTGGTGACTTTTGTGGTCTGAAAGACTTCCTTCAACATAGACCCTTCAGCCCAGCAGAAAGTTTCATGATCAGAAGTGTGCAACAGAACAAGATGAAGTTCACTCTATTTGCTGGCTCTCTTTTGTTTATAGGATGGATGAGTGTGGTCTTAGCAgAGGATGGGCCTCCACGAGACTGCTGTATTGCTGTGTATAACACCAGAATATCACCTGAAAACATTTTGAGCTTTACTTCACAAGATACAGCGCTATGTCCTGTCGAAGCTGTAAGATTTCTGACCAGATTTAACAAAGTTATTTGTTCAGATCCTGAAAGCATATGGGCTAAGAGAGTAATGAAGATAGTGATAATGAGAACAACAACTACATCTGCTATGTGCTCTACAATTACAACAAACACGAGCCCAAATACAGTTACAACAGACATAACATCGGGAACAGACACCGAGATCAGCACAAGTGATGGCCGTACGGCAGACTGCTGTACTACTGTGACAAACATCAAACTACCAGTtgaaaatattgtgcattatGACATGCAAGAAGCAAACCTATGTCTTTTCAGAGCTATAAGATTCCACACCATTAgaaacataattatttgttcAGATCCAGACAGCATCTGGGCTAAAAAGGCGAAGGGGATAGTGGATGGGAGAATAACAATCAAAACATCTGGACAAAAGGCAGAGATCAGCAAAACAACCATCCGGTCAACTTCAGTGACCAAAGACAAACAAGATTCATCTGTGAGAACTGCGACAACATTCACACCATCTACAACCAAGGACTGCTGCTTAActgtaacaaaaaacaaaccagcGTTTCATGAAATTGTGGACTACAGAATTCAAGAAATGCCACTTTGCTCTTTAAGAGCTGTGCTATTCATAACTGTGGAGAACAAGACACTTTGCTCTTCTCCAGTAGAAGACTGGGTCCAGGATTACATTCAAAACttgaacaaaagaagaaaaacaacagaatttacCACCAAAAGAATAAAAGACCAATATAAAAACACCAATAATCACTTTTGTCTAAAGAAAGAAGAAGTTAAACACTTTTGTGTCACGCAGCTTTAAAAAGTCTGGTGGAAAAGCTTGTCCAACAAGGTCTGTATAATATTACCAGGATAACCAACAGCTAAGTCTAATAAAGACTtagttaaaaaaagtctttattaaatacattttactcaCATTGTCAtgatttgtattcttttttatgaagacttgtattttttttcttacatttattttaaataaagtatacaGTAGTAACTAGTAACACATCTTATTTGttcatatt
>XM_043256362.1
ACCGACACACTGAAACCTGATGTCTGTACCCCTCCCCTGCCTTGTGTTGAGAGCTAGATATGGTGTAAAACGTATTCAAAGTGGTCTTATTGTATTCCTCCAATTAAGTTGTTATTGTCAGTGTTAAACTACATGCCTCTTTGTACTGGAAGGTGGAGGAAGACCCTTATATCTGGGACGTAACAACACCACGGtaaaacatatatACTTCCTTCAACATAGACCCTTCAGCCCAGCAGAAAGTTTCATGATCAGAAGTGTGCAACAGAACAAGATGAAGTTCACTCTATTTGCTGGCTCTCTTTTGTTTATAGGATGGATGAGTGTGGTCTTAGCAgAGGATGGGCCTCCACGAGACTGCTGTATTGCTGTGTATAACACCAGAATATCACCTGAAAACATTTTGAGCTTTACTTCACAAGATACAGCGCTATGTCCTGTCGAAGCTGTAAGATTTCTGACCAGATTTAACAAAGTTATTTGTTCAGATCCTGAAAGCATATGGGCTAAGAGAGTAATGAAGATAGTGATAATGAGAACAACAACTACATCTGCTATGTGCTCTACAATTACAACAAACACGAGCCCAAATACAGTTACAACAGACATAACATCGGGAACAGACACCGAGATCAGCACAAGTGATGGCCGTACGGCAGACTGCTGTACTACTGTGACAAACATCAAACTACCAGTtgaaaatattgtgcattatGACATGCAAGAAGCAAACCTATGTCTTTTCAGAGCTATAAGATTCCACACCATTAgaaacataattatttgttcAGATCCAGACAGCATCTGGGCTAAAAAGGCGAAGGGGATAGTGGATGGGAGAATAACAATCAAAACATCTGGACAAAAGGCAGAGATCAGCAAAACAACCATCCGGTCAACTTCAGTGACCAAAGACAAACAAGATTCATCTGTGAGAACTGCGACAACATTCACACCATCTACAACCAAGGACTGCTGCTTAActgtaacaaaaaacaaaccagcGTTTCATGAAATTGTGGACTACAGAATTCAAGAAATGCCACTTTGCTCTTTAAGAGCTGTGCTATTCATAACTGTGGAGAACAAGACACTTTGCTCTTCTCCAGTAGAAGACTGGGTCCAGGATTACATTCAAAACttgaacaaaagaagaaaaacaacagaatttacCACCAAAAGAATAAAAGACCAATATAAAAACACCAATAATCACTTTTGTCTAAAGAAAGAAGAAGTTAAACACTTTTGTGTCACGCAGCTTTAAAAAGTCTGGTGGAAAAGCTTGTCCAACAAGGTCTGTATAATATTACCAGGATAACCAACAGCTAAGTCTAATAAAGACTtagttaaaaaaagtctttattaaatacattttactcaCATTGTCAtgatttgtattcttttttatgaagacttgtattttttttcttacatttattttaaataaagtatacaGTAGTAACTAGTAACACATCTTATTTGttcatatt
>XM_043256373.1
ACCGACACACTGAAACCTGATGTCTGTACCCCTCCCCTGCCTTGTGTTGAGAGCTAGATATGGTGTAAAACGTATTCAAAGTGGTCTTATTGTATTCCTCCAATTAAGTTGTTATTGTCAGTGTTAAACTACATGCCTCTTTGTACTGGAAGGTGGAGGAAGACCCTTATATCTGGGACGTAACAACACCACGACCCTTCAGCCCAGCAGAAAGTTTCATGATCAGAAGTGTGCAACAGAACAAGATGAAGTTCACTCTATTTGCTGGCTCTCTTTTGTTTATAGGATGGATGAGTGTGGTCTTAGCAgAGGATGGGCCTCCACGAGACTGCTGTATTGCTGTGTATAACACCAGAATATCACCTGAAAACATTTTGAGCTTTACTTCACAAGATACAGCGCTATGTCCTGTCGAAGCTGTAAGATTTCTGACCAGATTTAACAAAGTTATTTGTTCAGATCCTGAAAGCATATGGGCTAAGAGAGTAATGAAGATAGTGATAATGAGAACAACAACTACATCTGCTATGTGCTCTACAATTACAACAAACACGAGCCCAAATACAGTTACAACAGACATAACATCGGGAACAGACACCGAGATCAGCACAAGTGATGGCCGTACGGCAGACTGCTGTACTACTGTGACAAACATCAAACTACCAGTtgaaaatattgtgcattatGACATGCAAGAAGCAAACCTATGTCTTTTCAGAGCTATAAGATTCCACACCATTAgaaacataattatttgttcAGATCCAGACAGCATCTGGGCTAAAAAGGCGAAGGGGATAGTGGATGGGAGAATAACAATCAAAACATCTGGACAAAAGGCAGAGATCAGCAAAACAACCATCCGGTCAACTTCAGTGACCAAAGACAAACAAGATTCATCTGTGAGAACTGCGACAACATTCACACCATCTACAACCAAGGACTGCTGCTTAActgtaacaaaaaacaaaccagcGTTTCATGAAATTGTGGACTACAGAATTCAAGAAATGCCACTTTGCTCTTTAAGAGCTGTGCTATTCATAACTGTGGAGAACAAGACACTTTGCTCTTCTCCAGTAGAAGACTGGGTCCAGGATTACATTCAAAACttgaacaaaagaagaaaaacaacagaatttacCACCAAAAGAATAAAAGACCAATATAAAAACACCAATAATCACTTTTGTCTAAAGAAAGAAGAAGTTAAACACTTTTGTGTCACGCAGCTTTAAAAAGTCTGGTGGAAAAGCTTGTCCAACAAGGTCTGTATAATATTACCAGGATAACCAACAGCTAAGTCTAATAAAGACTtagttaaaaaaagtctttattaaatacattttactcaCATTGTCAtgatttgtattcttttttatgaagacttgtattttttttcttacatttattttaaataaagtatacaGTAGTAACTAGTAACACATCTTATTTGttcatatt
>XM_043256383.1
ACCGACACACTGAAACCTGATGTCTGTACCCCTCCCCTGCCTTGTGTTGAGAGCTAGATATGGTGTAAAACGTATTCAAAGTGGTCTTATTGTATTCCTCCAATTAAGTTGTTATTGTCAGTGTTAAACTACATGCCTCTTTGTACTGGAAGGTGGAGGAAGGTGGGtgccattttatttctgtaaacctttttttctcctgtCTTTGGTTAGTTAGGGAGTTAGTGTACATGTCTGTTgttaattttcttttgttttgtcagtttaGATCGTTTTACTACTTAAGTAGTCagttccttttatttattattttggcctTTACTTCTCCTGAAGTCCATTTTGactcatatttaattttgtaaataaatgcttgtgttttttttgcaactttttttttttttacttctgttgtACATATAGAAGCAGGGGACTGTTGCACTCATCccaacttatttttttatgtttacttttCCTGTTACTCCTTTACCCTAGACCCTTATATCTGGGACGTAACAACACCACGACCCTTCAGCCCAGCAGAAAGTTTCATGATCAGAAGTGTGCAACAGAACAAGATGAAGTTCACTCTATTTGCTGGCTCTCTTTTGTTTATAGGATGGATGAGTGTGGTCTTAGCAgAGGATGGGCCTCCACGAGACTGCTGTATTGCTGTGTATAACACCAGAATATCACCTGAAAACATTTTGAGCTTTACTTCACAAGATACAGCGCTATGTCCTGTCGAAGCTGTAAGATTTCTGACCAGATTTAACAAAGTTATTTGTTCAGATCCTGAAAGCATATGGGCTAAGAGAGTAATGAAGATAGTGATAATGAGAACAACAACTACATCTGCTATGTGCTCTACAATTACAACAAACACGAGCCCAAATACAGTTACAACAGACATAACATCGGGAACAGACACCGAGATCAGCACAAGTGATGGCCGTACGGCAGACTGCTGTACTACTGTGACAAACATCAAACTACCAGTtgaaaatattgtgcattatGACATGCAAGAAGCAAACCTATGTCTTTTCAGAGCTATAAGATTCCACACCATTAgaaacataattatttgttcAGATCCAGACAGCATCTGGGCTAAAAAGGCGAAGGGGATAGTGGATGGGAGAATAACAATCAAAACATCTGGACAAAAGGCAGAGATCAGCAAAACAACCATCCGGTCAACTTCAGTGACCAAAGACAAACAAGATTCATCTGTGAGAACTGCGACAACATTCACACCATCTACAACCAAGGACTGCTGCTTAActgtaacaaaaaacaaaccagcGTTTCATGAAATTGTGGACTACAGAATTCAAGAAATGCCACTTTGCTCTTTAAGAGCTGTGCTATTCATAACTGTGGAGAACAAGACACTTTGCTCTTCTCCAGTAGAAGACTGGGTCCAGGATTACATTCAAAACttgaacaaaagaagaaaaacaacagaatttacCACCAAAAGAATAAAAGACCAATATAAAAACACCAATAATCACTTTTGTCTAAAGAAAGAAGAAGTTAAACACTTTTGTGTCACGCAGCTTTAAAAAGTCTGGTGGAAAAGCTTGTCCAACAAGGTCTGTATAATATTACCAGGATAACCAACAGCTAAGTCTAATAAAGACTtagttaaaaaaagtctttattaaatacattttactcaCATTGTCAtgatttgtattcttttttatgaagacttgtattttttttcttacatttattttaaataaagtatacaGTAGTAACTAGTAACACATCTTATTTGttcatatt
>XM_043256392.1
ACCGACACACTGAAACCTGATGTCTGTACCCCTCCCCTGCCTTGTGTTGAGAGCTAGATATGGTGTAAAACGTATTCAAAGTGGTCTTATTGTATTCCTCCAATTAAGTTGTTATTGTCAGTGTTAAACTACATGCCTCTTTGTACTGGAAGGTGGAGGAAGACCCTTATATCTGGGACGTAACAACACCACGGATGGATGAGTGTGGTCTTAGCAgAGGATGGGCCTCCACGAGACTGCTGTATTGCTGTGTATAACACCAGAATATCACCTGAAAACATTTTGAGCTTTACTTCACAAGATACAGCGCTATGTCCTGTCGAAGCTGTAAGATTTCTGACCAGATTTAACAAAGTTATTTGTTCAGATCCTGAAAGCATATGGGCTAAGAGAGTAATGAAGATAGTGATAATGAGAACAACAACTACATCTGCTATGTGCTCTACAATTACAACAAACACGAGCCCAAATACAGTTACAACAGACATAACATCGGGAACAGACACCGAGATCAGCACAAGTGATGGCCGTACGGCAGACTGCTGTACTACTGTGACAAACATCAAACTACCAGTtgaaaatattgtgcattatGACATGCAAGAAGCAAACCTATGTCTTTTCAGAGCTATAAGATTCCACACCATTAgaaacataattatttgttcAGATCCAGACAGCATCTGGGCTAAAAAGGCGAAGGGGATAGTGGATGGGAGAATAACAATCAAAACATCTGGACAAAAGGCAGAGATCAGCAAAACAACCATCCGGTCAACTTCAGTGACCAAAGACAAACAAGATTCATCTGTGAGAACTGCGACAACATTCACACCATCTACAACCAAGGACTGCTGCTTAActgtaacaaaaaacaaaccagcGTTTCATGAAATTGTGGACTACAGAATTCAAGAAATGCCACTTTGCTCTTTAAGAGCTGTGCTATTCATAACTGTGGAGAACAAGACACTTTGCTCTTCTCCAGTAGAAGACTGGGTCCAGGATTACATTCAAAACttgaacaaaagaagaaaaacaacagaatttacCACCAAAAGAATAAAAGACCAATATAAAAACACCAATAATCACTTTTGTCTAAAGAAAGAAGAAGTTAAACACTTTTGTGTCACGCAGCTTTAAAAAGTCTGGTGGAAAAGCTTGTCCAACAAGGTCTGTATAATATTACCAGGATAACCAACAGCTAAGTCTAATAAAGACTtagttaaaaaaagtctttattaaatacattttactcaCATTGTCAtgatttgtattcttttttatgaagacttgtattttttttcttacatttattttaaataaagtatacaGTAGTAACTAGTAACACATCTTATTTGttcatatt
>XM_043256398.1
ACCGACACACTGAAACCTGATGTCTGTACCCCTCCCCTGCCTTGTGTTGAGAGCTAGATATGGTGTAAAACGTATTCAAAGTGGTCTTATTGTATTCCTCCAATTAAGTTGTTATTGTCAGTGTTAAACTACATGCCTCTTTGTACTGGAAGGTGGAGGAAGACCCTTATATCTGGGACGTAACAACACCACGGtaaaacatatatGATGGATGAGTGTGGTCTTAGCAgAGGATGGGCCTCCACGAGACTGCTGTATTGCTGTGTATAACACCAGAATATCACCTGAAAACATTTTGAGCTTTACTTCACAAGATACAGCGCTATGTCCTGTCGAAGCTGTAAGATTTCTGACCAGATTTAACAAAGTTATTTGTTCAGATCCTGAAAGCATATGGGCTAAGAGAGTAATGAAGATAGTGATAATGAGAACAACAACTACATCTGCTATGTGCTCTACAATTACAACAAACACGAGCCCAAATACAGTTACAACAGACATAACATCGGGAACAGACACCGAGATCAGCACAAGTGATGGCCGTACGGCAGACTGCTGTACTACTGTGACAAACATCAAACTACCAGTtgaaaatattgtgcattatGACATGCAAGAAGCAAACCTATGTCTTTTCAGAGCTATAAGATTCCACACCATTAgaaacataattatttgttcAGATCCAGACAGCATCTGGGCTAAAAAGGCGAAGGGGATAGTGGATGGGAGAATAACAATCAAAACATCTGGACAAAAGGCAGAGATCAGCAAAACAACCATCCGGTCAACTTCAGTGACCAAAGACAAACAAGATTCATCTGTGAGAACTGCGACAACATTCACACCATCTACAACCAAGGACTGCTGCTTAActgtaacaaaaaacaaaccagcGTTTCATGAAATTGTGGACTACAGAATTCAAGAAATGCCACTTTGCTCTTTAAGAGCTGTGCTATTCATAACTGTGGAGAACAAGACACTTTGCTCTTCTCCAGTAGAAGACTGGGTCCAGGATTACATTCAAAACttgaacaaaagaagaaaaacaacagaatttacCACCAAAAGAATAAAAGACCAATATAAAAACACCAATAATCACTTTTGTCTAAAGAAAGAAGAAGTTAAACACTTTTGTGTCACGCAGCTTTAAAAAGTCTGGTGGAAAAGCTTGTCCAACAAGGTCTGTATAATATTACCAGGATAACCAACAGCTAAGTCTAATAAAGACTtagttaaaaaaagtctttattaaatacattttactcaCATTGTCAtgatttgtattcttttttatgaagacttgtattttttttcttacatttattttaaataaagtatacaGTAGTAACTAGTAACACATCTTATTTGttcatatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043256351.1 False 1530 mRNA 0.38 9 19622041 19625338
XM_043256362.1 False 1493 mRNA 0.38 9 19622041 19625338
XM_043256373.1 False 1464 mRNA 0.38 9 19622041 19625338
XM_043256383.1 True 1794 mRNA 0.37 8 19622041 19625338
XM_043256392.1 False 1372 mRNA 0.38 9 19622041 19625338
XM_043256398.1 False 1385 mRNA 0.37 9 19622041 19625338

Neighbor

gene id symbol gene type direction distance location
LOC122326186 NA coding upstream 2149 19618385 ~ 19619892 (+)
ccl20l LOC107708274,LOC107668934,LOC107583148,LOC107706309 coding upstream 20097 19600097 ~ 19601944 (+)
zgc:136870 LOC107668990,LOC107580513,LOC107738198 coding upstream 272023 19348346 ~ 19350018 (+)
LOC122361922 LOC107712402,LOC107573958,LOC107702059,LOC107681930,LOC107729611,LOC106569547,LOC107572764 coding upstream 798592 18809418 ~ 18823449 (+)
LOC122362102 LOC107575627,LOC107712395,LOC107655465 coding upstream 859066 18753904 ~ 18762975 (+)
LOC122324221 NA coding downstream 4403 19629741 ~ 19631130 (+)
epha4b epha4b,LOC107694655,LOC107668971,LOC108428906,LOC108268054,LOC103372263 coding downstream 19272 19644610 ~ 19745895 (+)
acvr1l acvr1l,LOC107678695,LOC107749086,LOC107602619,LOC107721710,LOC107690001 coding downstream 669247 20294585 ~ 20303774 (+)
odf3l2a zgc:110183,LOC107749223,LOC107602632,LOC107721708,LOC107588920,LOC107690329,LOC107678684 coding downstream 808131 20433469 ~ 20435422 (+)
vcpip1 vcpip1,LOC107567007,LOC107721719,LOC107659314,LOC107690121,LOC107749097,LOC107602633 coding downstream 894571 20519909 ~ 20529006 (+)
G13768 NA non-coding upstream 5986 19613459 ~ 19616055 (+)
G13769 NA non-coding upstream 9136 19612269 ~ 19612905 (+)
G13748 NA non-coding upstream 81063 19538570 ~ 19540978 (+)
G13690 NA non-coding upstream 458699 19163105 ~ 19163342 (+)
G13682 NA non-coding upstream 488905 19132729 ~ 19133136 (+)
G13829 znf622,LOC107678698,LOC107602620,LOC107588872 non-coding downstream 686708 20312046 ~ 20314981 (+)
G13821 NA non-coding downstream 691843 20317181 ~ 20321388 (+)
G13857 NA non-coding downstream 838400 20463738 ~ 20463959 (+)
G13874 NA non-coding downstream 840189 20465527 ~ 20465846 (+)
G13851 LOC107721736 non-coding downstream 852625 20477963 ~ 20499950 (+)
rem2 LOC107583115,LOC107567555,LOC107668956,LOC107738122,LOC107706340 other upstream 1459899 18138644 ~ 18162142 (+)
nedd8l nedd8l,LOC107591390,LOC104949953,LOC104931181,LOC107559219 other upstream 1750625 17870258 ~ 17871416 (+)
G13137 NA other upstream 1805277 17784179 ~ 17816764 (+)
LOC122325453 LOC107668965 other upstream 1839677 17779339 ~ 17782364 (+)
G13111 LOC107738210,LOC107591364 other upstream 2013949 17607252 ~ 17608092 (+)
crlf1a crlf1a,LOC107602622,LOC107678692,LOC107588877,LOC107690059 other downstream 790865 20416203 ~ 20429348 (+)
gbp2 LOC107678697,LOC107602627,LOC107690079,LOC107721763 other downstream 841930 20467268 ~ 20473524 (+)
G13882 LOC107749119,LOC107602627,LOC107721764,LOC107659530,LOC107721763 other downstream 856326 20481664 ~ 20485218 (+)
LOC122326305 LOC107749119,LOC107602627,LOC107566983,LOC107690079,LOC107721763,LOC107721764,LOC107678697 other downstream 867836 20493174 ~ 20508391 (+)
G13998 LOC107659744,LOC107749160,LOC107563810,LOC107563823 other downstream 1538604 21163942 ~ 21164822 (+)

Expression


Co-expression Network