si:ch211-106h4.12



Basic Information


Item Value
gene id si:ch211-106h4.12
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 14773824 ~ 14775496 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>XM_043256751.1
AAGTGCGCTTGGACTGCAGAAAGCAGCAGGATGAAGGGTAGTGTGCAGCTAGGGCTGTTGTGTCTCAGCCTGTTCGTCTTAAGTCTTCATGGAGAAAAAGAAGTTGAAACAGATACAAGCATGCAAATGCCAGTGAACTTTGATGAGCCGGAGCTTCATCAGTCTGAGACGGGCAGAGTACAACGACACACAGTCTccacagagaagaaaaaagctgTTGCACCAAAAACTAAGCAAACTCTGAAACATCCAGGAAGTCTCTCTCCTTTGGGAGACATCCCAAAGACAAATCACCGCACCAAGAGGCAAGAAAACAGGAACAAGAAACCGAAAAGGCGTCCAGGAAGTGGCAGCGCTTTAGAAAGCCTCGACATTTCACCGACTGCGGGATGGCTTGCCGAATAAAATGACCTAAAGTCAAGACTCCTTCCCAACAAGGCTCCCCGAATCAAGAACAAAGGAATGTGCCGCGTTTCATAAAGAGTGTTTCAGGCTCAAGTTATGCTTGTGATAATCATTTTATGGCTTTTATTTTCCAAGTGCATTTTGGTTAAGTACTAAACTGTATGgagaacaaaatgtatttactcaACAGTCCCCCCGTGTGTGATTCTTATTCGCATCACTAGGGGGCGATATTTACAAGAGATGAGCGCTTAAACCGGCTTGGCTTCTGTTAAAACGAAACGTTTGATATCTGTTTATCTTTATCTCTTAATTACAATAAAGCATTCGTGTTTAAA
>XM_043256760.1
GAAGTGCGCTTGGACTGCAGAAAGCAGCAGGATGAAGGGTAGTGTGCAGCTAGGGCTGTTGTGTCTCAGCCTGTTCGTCTTAAGTCTTCATGGAGAAAAAGAAGTTGAAACAGATACAAGCATGCAAATGCCAGTGAACTTTGATGAGCCGGAGCTTCATCAGTCTGAGACGGGCAGAGTACAACGACACACAGTCTccacagagaagaaaaaagctgTTGCACCAAAAACTAAGCAAACTCTGAAACATCCAGGAAGTCTCTCTCCTTTGGGAGACATCCCAAAGACAAATCACCGCACCAAGAGGCAAGAAAACAGGAACAAGAAACCGAAAAGGCGTCCAGGAAGTGGCAGCGCTTTAGAAAGCCTCGACATTTCACCGACTGCGGGATGGCTTGCCGAATAAAATGACCTAAAGTCAAGACTCCTTCCCAGGCTCCCCGAATCAAGAACAAAGGAATGTGCCGCGTTTCATAAAGAGTGTTTCAGGCTCAAGTTATGCTTGTGATAATCATTTTATGGCTTTTATTTTCCAAGTGCATTTTGGTTAAGTACTAAACTGTATGgagaacaaaatgtatttactcaACAGTCCCCCCGTGTGTGATTCTTATTCGCATCACTAGGGGGCGATATTTACAAGAGATGAGCGCTTAAACCGGCTTGGCTTCTGTTAAAACGAAACGTTTGATATCTGTTTATCTTTATCTCTTAATTACAATAAAGCATTCGTGTTTAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_043256751.1 True 743 mRNA 0.43 6 14773825 14775496
XM_043256760.1 False 740 mRNA 0.44 6 14773824 14775496

Neighbor


gene id symbol gene type direction distance location
si:ch211-106h4.4 malrd1,LOC107713964,LOC107686070 coding upstream 27866 14726160 ~ 14745958 (+)
cacnb2b LOC107664070,LOC107751551,LOC107686054 coding upstream 64625 14682890 ~ 14709199 (+)
tmem236 tmem236,si:dkey-32m20.1,LOC107713979,LOC107686088,LOC107751554,LOC107664072 coding upstream 92492 14678449 ~ 14681332 (+)
stam stam,LOC107664071,LOC107556673,LOC107686052 coding upstream 96517 14669402 ~ 14677307 (+)
colec12 colec12,LOC107686068,LOC107751569 coding upstream 105399 14643504 ~ 14668425 (+)
rnf182 rnf182,LOC107686061,LOC107586260,LOC107751563,LOC107713969,LOC107579226 coding downstream 60663 14836159 ~ 14836952 (+)
ranbp9 ranbp9,LOC107713984,LOC107556766,LOC107664064,LOC107686062,LOC107751564 coding downstream 62926 14838422 ~ 14849429 (+)
epdr1 epdr1,LOC107664036,LOC107558964,LOC108267170,LOC107713986 coding downstream 77204 14852700 ~ 14855171 (+)
stard3nl stard3nl,LOC107686094,LOC107713985,LOC107664037,LOC107751580 coding downstream 80333 14855829 ~ 14863508 (+)
otulinb LOC107713989,LOC107657417,LOC107718039,LOC107701026,LOC107556827 coding downstream 135379 14910875 ~ 14915309 (+)
G11918 LOC107664027,LOC107713977,LOC107584165,LOC107556660 non-coding upstream 136019 14637589 ~ 14637805 (+)
G11917 NA non-coding upstream 137055 14636444 ~ 14636769 (+)
G11914 NA non-coding upstream 170279 14559860 ~ 14603545 (+)
LOC122355240 NA non-coding upstream 275951 14495450 ~ 14497873 (+)
G11898 LOC106524523,LOC107383785 non-coding upstream 336415 14388985 ~ 14437409 (+)
G12135 fam134b,LOC107686060,LOC107664066,LOC107584095,LOC107751562,LOC107558208,LOC107713983 non-coding downstream 47665 14823161 ~ 14826945 (+)
G12136 NA non-coding downstream 51555 14827051 ~ 14829486 (+)
G12143 NA non-coding downstream 81876 14857372 ~ 14886069 (+)
G12144 NA non-coding downstream 90702 14866198 ~ 14878772 (+)
LOC122323195 NA non-coding downstream 163693 14939189 ~ 14982818 (+)
plxdc2a LOC107686089,LOC107713976,LOC107751571 other upstream 20663 14746107 ~ 14753161 (+)
G11854 jph1b,jph1,LOC107584332,LOC107550709,LOC107746914,LOC107732545,LOC107664083,LOC107686034,LOC107740042 other upstream 594209 14175364 ~ 14179615 (+)
rnf152 rnf152,LOC107729101,LOC107679332,LOC107567413,LOC107674343,LOC107714840,LOC107584540 other upstream 1899816 12867929 ~ 12874008 (+)
LOC122358236 NA other upstream 2147437 12623823 ~ 12626387 (+)
pld1a pld1a,LOC107688495,LOC107550602,LOC107680234,LOC107722545,LOC108442335 other upstream 2836234 11908073 ~ 11937590 (+)
ackr4a LOC107664061,LOC107751559,LOC107556724,LOC107751558,LOC107751560,LOC107713978,LOC107586293 other downstream 826 14776322 ~ 14782977 (+)
LOC122357435 LOC107733881,LOC107599885,LOC107657419 other downstream 466301 15241797 ~ 15249249 (+)
dars2 dars2,LOC107720851,LOC107700987,LOC107558296,LOC107599907 other downstream 1084683 15860179 ~ 15875764 (+)
G12531 LOC107722077,LOC107568983 other downstream 1491547 16267043 ~ 16268797 (+)
LOC122323293 NA other downstream 1674636 16450132 ~ 16456532 (+)

Expression



Co-expression Network