scinlb (LOC107588891,LOC107700536,LOC107658127,LOC107568091,LOC107743367,LOC108280481,LOC106568976)


Basic Information

Item Value
gene id scinlb
gene name LOC107588891,LOC107700536,LOC107658127,LOC107568091,LOC107743367,LOC108280481,LOC106568976
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 7257164 ~ 7268405 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043257663.1
CGGCGGTTCATAACAAACGATAATGTTGTTAACCTATTGAACATAAGGAGCAGCTTTCAGATTGTTTATAATAATGGTCTTGTTGTAAATAATGTAGGTTTCttgcaaatggaaaaaaagcccGTTTGGCAGTGAAGAATAAGCAATGCAAAGTTACAATTACGCTTAATTGGAATTGACAAAACGCAAGCTTTTAGAGTCGCACGTTATGCAAAGGCTGTGTGAAGACCTGACACTCCCTCCAGTTAAATCGCGGATTCAGTAAAGAAAGCCTACAACGcgtctctttttctcttgcACCGACAGCTTTCCGCTTCATCCACGATCTCTCACTATGGTGTCCCATAAGGAGTTTGAGACTGCAGGGAAAGCTGCTGGTCTGCAGATATGGCGCATTGAGAACATGGACCTGAAGCCAGTGCCTAAGAATCTCTATGGCAACTTCTATACGGGTGACGCCTATCTTCTTCTGTACACCACCAGCGCACCTTCATACTTTATACACATGTGGATGGGGAATGAGTGTTCTCAAGATGAAAGTGGAGCTGCAGCTATCTTCGCCACACAGCTGGATGACTTTCTAGGGGGTGGTCCAGTTCAGTTCCGTGAGGTCCAAAACAACGAGTCGCTCACCTTCTTGGGCTACTTTAAGTCTGGCATCAAGTATAAGCAAGGTGGGGTCGCGTCTGGCTTCCATCACGTGTTGACCAATGACGTGGATGTGAAGCGTCTCCTGCACATCAAGGGCAGGAGGGCCATCAGAGCCACTGAGGTGGAGATGTCCTGGAGCAGCTTCAACAAAGGAGACTGCTTTATTGTAGACTTGGGGAAGGACATTTATCAGTGGTGTGGCAGTGACTGCAATCGTTTTGAACGTCTAAAGGCCTCCCAGTTGGCCATTGATATCCGGGACAATGAGAGGAACGGCAGGGCCAAGCTGATCATGGTGGAAGATGGGGCTGAGCCAGACGCTTTGTCTAAAGTTCTTGGGCCCAAATCCAGCATCGCCCCAGCAACTCCTGATGATGAGGAAGTGGACACCTCCAACAAGAAGAAGGCAGCAATGTACATGatTTCAGATGCCTCTGGCTCCATGAAAACATCTATTGTGGCCCAGTCTAGCCCGTTCAAGCAGGAGATGCTCTCCCTAGATGAGTGCTACATCCTGGACAACGGAGTTGATaagaatgtgtttgtttggaaaGGACCAAATGCAAACACATCTGAACGCAAAGCGGCTATGAAAGCAGCAGAGCAGTTCATCAAAGAGAAGAACTACTCTAGTAAAACACAGATCCAGGTGCTGCCTGCAGGGGGCGAGACCACCCTGTTCAAGCAGTTCTTCTCTAACTGGAAGGACAAGGACCAAACCACTGGTCCTACCAAGGCCTACACCATCGGCAAAATAGCCCGTGTGGAGCAGATTCCTTTCGATGCCTCCAGCCTCCATAATAACAAGGCCATGGCAGCCCAACACAACATGGTTGATGATGGTTCTGGAAAAGTTCAGATCTGGCGCGTGGAGGGAGGGGAGCGTGTCCCGGTGAATCCCTCTACTTACGGGCAGTTCTTTGGGGGAGACTGTTACCTGATCCTGTACAGTTATAAACAGGGAAGTAGGGAGCAGCATATCATCTACACCTGGCAGGGCCTGAAGAGCACTCAGGATGAGCTGGCGGCGTCTGCCTTCCTCACGGTCCAGCTGGATGACTCCATGGGAGGAGCTCCAGTTCAGGTGCGAGTAACACAAGGTCAAGAACCTCCCCATCTGATGAGTCTGTTCAAGGGCAAACCTATGATCATCCATAGTGGAGGGACGTCCCGCAAGGATGGCCAGACCAAGACAGGCAGCACTCGCCTCTTCCACATCCGACAGAGCTCTTCTAGAGCCACAAGGGCTGTCGAGGTTGAACCATCTGCATCCAACTTAAACACCAATGACGTATTTGTGCTGAAGTCGCcagattgtgtgtttgtgtggaaagGCGCAGGTGCCAGCGATGAAGAAATGGTTGCTGCGAAGTATGTTGTAAGTGTAGTGGGAGGAAAACCCACTGACGTGGCCGAGGGTAAAGAACCAGCTGGATTCTGGTCAGCTCTGGGCGGGAAGAAGGAGTACCAGACATCTAAAACTCTACGAAATATGGTCAAACCACCACGTCTGTTCGGCTGCTCCAATAAGACAGGTCGCCTAATGGTTGAGGAAGTTCCTGGAGACTTCACTCAGTCAGACTTGGCTACTGATGATGTCATGTTACTTGACACTTGGGATCAGATCTTCCTTTGGATTGGTAAAGAAGCCAATGAGGTTGAAAAAACTGAGTCACCAAAAATAGCTAAGGACTATGTGGACTCTGATCCTTCTGGACGCCGTGGACTGCCCATCACAACCATAAAGCAGGGGGCTGAGCCTCCGATCTTCACAGGCTGGTTCCAGGCTTGGGACTCACATATGTGGGACACTGACCCTCTGGAGAGAATCCGAGCTcgcttttaaacacaaaactgtttCCTCTTCTTTTCCTTGTAAAAGCACTTATTGTTTCTGTGTAATAAACTGCAACTTTCCGAGGTTTTATGTAATCTAAACATTGGTGAAATGCCCATCTCGCATAAAAGtccaagttttatttttgattttgggagTGTGAAGCTTTGTTCAAGCAGTACCAGCTGtcataatagaaaaaaaatctaccaaAATGATTATCACTCATAATAATGATATGAGACATAAGGTATGGTTCCTGTTaccctgtttttattatttctgccATTATGGCTTTCAAACATGTTAGCGTTATAAAATATGTGGCAAACTTCGTGACTATTGTTTTTACACACAAGCCATTGATATATGTTCGGCTTGTACTGTGATGGTTTTTATGTCAGACTTTAATAAACTGAGATTTTGAGAAAgtgaaa
>XM_043257672.1
ACGCCCCTGTGTTCTGCAGACACTCCCTCCAGTTAAATCGCGGATTCAGTAAAGAAAGCCTACAACGcgtctctttttctcttgcACCGACAGCTTTCCGCTTCATCCACGATCTCTCACTATGGTGTCCCATAAGGAGTTTGAGACTGCAGGGAAAGCTGCTGGTCTGCAGATATGGCGCATTGAGAACATGGACCTGAAGCCAGTGCCTAAGAATCTCTATGGCAACTTCTATACGGGTGACGCCTATCTTCTTCTGTACACCACCAGCGCACCTTCATACTTTATACACATGTGGATGGGGAATGAGTGTTCTCAAGATGAAAGTGGAGCTGCAGCTATCTTCGCCACACAGCTGGATGACTTTCTAGGGGGTGGTCCAGTTCAGTTCCGTGAGGTCCAAAACAACGAGTCGCTCACCTTCTTGGGCTACTTTAAGTCTGGCATCAAGTATAAGCAAGGTGGGGTCGCGTCTGGCTTCCATCACGTGTTGACCAATGACGTGGATGTGAAGCGTCTCCTGCACATCAAGGGCAGGAGGGCCATCAGAGCCACTGAGGTGGAGATGTCCTGGAGCAGCTTCAACAAAGGAGACTGCTTTATTGTAGACTTGGGGAAGGACATTTATCAGTGGTGTGGCAGTGACTGCAATCGTTTTGAACGTCTAAAGGCCTCCCAGTTGGCCATTGATATCCGGGACAATGAGAGGAACGGCAGGGCCAAGCTGATCATGGTGGAAGATGGGGCTGAGCCAGACGCTTTGTCTAAAGTTCTTGGGCCCAAATCCAGCATCGCCCCAGCAACTCCTGATGATGAGGAAGTGGACACCTCCAACAAGAAGAAGGCAGCAATGTACATGatTTCAGATGCCTCTGGCTCCATGAAAACATCTATTGTGGCCCAGTCTAGCCCGTTCAAGCAGGAGATGCTCTCCCTAGATGAGTGCTACATCCTGGACAACGGAGTTGATaagaatgtgtttgtttggaaaGGACCAAATGCAAACACATCTGAACGCAAAGCGGCTATGAAAGCAGCAGAGCAGTTCATCAAAGAGAAGAACTACTCTAGTAAAACACAGATCCAGGTGCTGCCTGCAGGGGGCGAGACCACCCTGTTCAAGCAGTTCTTCTCTAACTGGAAGGACAAGGACCAAACCACTGGTCCTACCAAGGCCTACACCATCGGCAAAATAGCCCGTGTGGAGCAGATTCCTTTCGATGCCTCCAGCCTCCATAATAACAAGGCCATGGCAGCCCAACACAACATGGTTGATGATGGTTCTGGAAAAGTTCAGATCTGGCGCGTGGAGGGAGGGGAGCGTGTCCCGGTGAATCCCTCTACTTACGGGCAGTTCTTTGGGGGAGACTGTTACCTGATCCTGTACAGTTATAAACAGGGAAGTAGGGAGCAGCATATCATCTACACCTGGCAGGGCCTGAAGAGCACTCAGGATGAGCTGGCGGCGTCTGCCTTCCTCACGGTCCAGCTGGATGACTCCATGGGAGGAGCTCCAGTTCAGGTGCGAGTAACACAAGGTCAAGAACCTCCCCATCTGATGAGTCTGTTCAAGGGCAAACCTATGATCATCCATAGTGGAGGGACGTCCCGCAAGGATGGCCAGACCAAGACAGGCAGCACTCGCCTCTTCCACATCCGACAGAGCTCTTCTAGAGCCACAAGGGCTGTCGAGGTTGAACCATCTGCATCCAACTTAAACACCAATGACGTATTTGTGCTGAAGTCGCcagattgtgtgtttgtgtggaaagGCGCAGGTGCCAGCGATGAAGAAATGGTTGCTGCGAAGTATGTTGTAAGTGTAGTGGGAGGAAAACCCACTGACGTGGCCGAGGGTAAAGAACCAGCTGGATTCTGGTCAGCTCTGGGCGGGAAGAAGGAGTACCAGACATCTAAAACTCTACGAAATATGGTCAAACCACCACGTCTGTTCGGCTGCTCCAATAAGACAGGTCGCCTAATGGTTGAGGAAGTTCCTGGAGACTTCACTCAGTCAGACTTGGCTACTGATGATGTCATGTTACTTGACACTTGGGATCAGATCTTCCTTTGGATTGGTAAAGAAGCCAATGAGGTTGAAAAAACTGAGTCACCAAAAATAGCTAAGGACTATGTGGACTCTGATCCTTCTGGACGCCGTGGACTGCCCATCACAACCATAAAGCAGGGGGCTGAGCCTCCGATCTTCACAGGCTGGTTCCAGGCTTGGGACTCACATATGTGGGACACTGACCCTCTGGAGAGAATCCGAGCTcgcttttaaacacaaaactgtttCCTCTTCTTTTCCTTGTAAAAGCACTTATTGTTTCTGTGTAATAAACTGCAACTTTCCGAGGTTTTATGTAATCTAAACATTGGTGAAATGCCCATCTCGCATAAAAGtccaagttttatttttgattttgggagTGTGAAGCTTTGTTCAAGCAGTACCAGCTGtcataatagaaaaaaaatctaccaaAATGATTATCACTCATAATAATGATATGAGACATAAGGTATGGTTCCTGTTaccctgtttttattatttctgccATTATGGCTTTCAAACATGTTAGCGTTATAAAATATGTGGCAAACTTCGTGACTATTGTTTTTACACACAAGCCATTGATATATGTTCGGCTTGTACTGTGATGGTTTTTATGTCAGACTTTAATAAACTGAGATTTTGAGAAAgtgaaa

Function

NR:

description
gelsolin-like

GO:

id name namespace
GO:0003779 actin binding molecular_function

KEGG:

id description
K05768 GSN; gelsolin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043257663.1 True 2925 mRNA 0.47 18 7257164 7268405
XM_043257672.1 False 2712 mRNA 0.48 17 7257492 7268405

Neighbor

gene id symbol gene type direction distance location
ccdc18 ccdc18,LOC107716953,LOC107658134,LOC107568077 coding upstream 2593 7236939 ~ 7254571 (+)
mtf2 mtf2,LOC107743365,LOC107568093 coding upstream 21051 7225090 ~ 7236113 (+)
rpl5a rpl5,LOC107568084,LOC107694375,LOC107743362,LOC107716952,LOC103368809 coding upstream 50762 7203301 ~ 7206402 (+)
rpap2 rpap2,LOC107716948,LOC107716950 coding upstream 72150 7176935 ~ 7185014 (+)
cdc7 cdc7,LOC107579524 coding upstream 87049 7164705 ~ 7170115 (+)
wls wls,LOC107684934 coding downstream 1310 7269715 ~ 7283810 (+)
dmbx1a dmbx1a,LOC107588924,LOC107743378,LOC107700538,LOC107551711,LOC107684938,LOC108442545 coding downstream 71866 7340271 ~ 7346655 (+)
ptger4c ptger4c,LOC107716941,LOC107700513,LOC107743379,LOC107684935,LOC107564388,LOC107551710 coding downstream 120013 7388418 ~ 7391035 (+)
glula LOC107563291,LOC107710552,LOC107700548,LOC107732203,LOC107553252 coding downstream 1046726 8315131 ~ 8318467 (+)
elovl1a elovl1a,LOC107553254,LOC107732201,LOC107700551,LOC107710545,LOC108438881,LOC103047025 coding downstream 1104833 8373238 ~ 8382443 (+)
G10021 NA non-coding upstream 46226 7210738 ~ 7210938 (+)
G10020 fam69a,fam69aa,LOC107716951,LOC107568082,LOC107694372,LOC108436064 non-coding upstream 47230 7206507 ~ 7209934 (+)
G10013 NA non-coding upstream 57627 7197090 ~ 7199537 (+)
G10012 NA non-coding upstream 60764 7189655 ~ 7196400 (+)
G9940 NA non-coding upstream 206170 7050725 ~ 7050994 (+)
G10094 NA non-coding downstream 152037 7420442 ~ 7421878 (+)
G10112 NA non-coding downstream 213225 7481630 ~ 7555541 (+)
G10127 LOC107551707,LOC107564386,LOC107743377,LOC107684933,LOC107710549 non-coding downstream 298905 7567310 ~ 7670458 (+)
G10145 LOC107564386,LOC107743377,LOC107684933,LOC107700544 non-coding downstream 342863 7611268 ~ 7612187 (+)
G10179 NA non-coding downstream 517073 7785478 ~ 7785832 (+)
lrrc53 LOC107700485,LOC107588905,LOC107716924 other upstream 151372 7098303 ~ 7105792 (+)
G9925 LOC107563058,LOC107549254 other upstream 270045 6986298 ~ 6987119 (+)
G9889 NA other upstream 564789 6691668 ~ 6692375 (+)
G9887 NA other upstream 566385 6690372 ~ 6690779 (+)
sst2 LOC107549725,LOC107710806 other upstream 889210 6367177 ~ 6367954 (+)
gng12a gng12a,LOC107700509,LOC107716954,LOC107551713 other downstream 17265 7285670 ~ 7300101 (+)
G10108 NA other downstream 236217 7504622 ~ 7582385 (+)
G10212 NA other downstream 838460 8106865 ~ 8107777 (+)
olfm3b olfm3b,LOC107700521,LOC107710604,LOC107745696,LOC107680049 other downstream 1894206 9162611 ~ 9171915 (+)
arpc5a arpc5a,arpc5,LOC107722639,LOC107693740,LOC107564704,LOC107677751,LOC107718183 other downstream 2478165 9746570 ~ 9751212 (+)

Expression


Co-expression Network