wls (wls,LOC107684934)


Basic Information

Item Value
gene id wls
gene name wls,LOC107684934
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 7269715 ~ 7283810 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043257685.1
CTATAGTTCCCTAGGAAGAGCGCAACACGGGCAGTTGAGCAGGGTTTGAGACGCAGCCCGTGTCGCGCTCTCAATCTCGGACAGCGCACTGGTCCACCTGGATGCCGTGACTTTCGCTTCTTTGCATTCAATCGTAAAACCAGACCCACTTTGAAAATGGCTGGAGCAATTATTGAGAACATGAGCACCAAAAAGTTGGTGATTGTGGGAGTAATTCTCCTTTTATTCCAGGCGTTCTCCTTTATGGTCGGAGGACTGATTGCTCCAAGCCCAACCACTGCCATCCATTACCTGGCCACCAAGTGTGTGGACACTGTGAAGACTCACCATAAGGGCCCCAAGTGGCTCATGCCATGGGGCCCCGACCAGTGCAGCAAGATCAAAGACTTTGATGAGGCCATGGCCAAGAGAATTGAAGCCAACAACATTGTGTTTGCAGTCCACATTCCACTACCCAACAGAGAGATGAGTGCCTGGTTCCAGTTCATGTTGGTTATACTCCAGTTTGAAATTGCCTTCAAAATGCAAAACCAGATTGAAGATGGAGCTTTGGTCACCATGGATGTTGGTCTGGCCTACAGAGACAGCTCTCTGAGTGAGTGGACTGAGATGGCCCATTCAATAGAGCATCGCAAACTGAGCTGCAATTTCACTGCAACAAAGACTTATGAGAACGAGGGGCGTTACTACAATTGTGACCTGTTGCCCTTTATGGAGGTTGGCAGTGTGTCCCATAAGTACTATCTTCTCAACATCCGACTACCTGTTAATGAAcgaaaaaaaatcaacattggGATTGGAGAAATCAAAGACATCCGTCTGGTGGGCATTCATCAAAACGGTGGCTTCACCAAGGTGTGGTTTGCCATGAAGACGTTCCTCACTCCCAGTGTCCTCATTATCATGATCTGGTACTGGAGGAGAATCACCCAGATGACCAGGCCACCTGTTCTTTTGGAAAAGATTATCTTTGCTCTGGGAATCTCGATGACATTCATCAATATCCCAGTTGAATGGTTCTCAGTGGGTTTCGACTGGACCTGGATGCTGCTGTTTGGTGACATCCGTCAGGGCATCTTCTATGCAATGCTGCTTTCCTTCTGGATCATCTTCTGTGGAGAACATCTTATGgaCCAGACTGAGAGAAACCGTTTTTCCGTGTACTGGAAGCAGGTTGGACCTATTGTCTTTGGTTCCTTCTGCCTATTCATTTTTGATATGTGTGAAAGAGGAGTACAGCTGAAGAACCCTTTTTACAGTATCTGGGCATCAGATGTTGGAACAGAGCTTGCTATGGCCTTCATCATTGTAGCAGGAATCTGCGCATGTctctacttcctgttcctgtgttTCATGGTATTCCAAGTGTTTAGAAACATCAGTGGGAAAAGGTCATCCTTACCTGCCATGACAAAGGCTCGTCAACTGCACTATGAGGGCCTCATCTTTCGCTTCAAGTTCCTGATGTTGGTCACATTAGCTTGCGCTGCAATGACTGTCATCTTCTTCATCATTAGCCAGGTGAATGAGGGTCACTGGCAGTGGGGTGGCTACACGGTTCAGGTTAACAGCGCCTTCTTCACCGGAATCTATGGCATGTGGAACCTCTATGTATTTGCCCTCATGTTTCTCTATGCACCGTCTCACAAGCGTTACGGAGATGAGCAATCAAGCGCTGGAAACAGTGGTGAAGACGCACAGTTGACTACCACCATCACACATGTGGATGGACCTACAGAGATCTACAAAATTACTGGCAAAGAAGCTCAAGAGTAACCAGCACCTTCATTCAGGGTCCGACAAGAGTCTCAAAACTTCAATAGTGTCCTGTGTGGTCCCtatcatttcaaacaaaacctcACAAATATTAAGCcccttttttcatttattgactTTCTATTCCGCTGAGGTTCAATCTAAAACATCTGCTTACGCCGAGCTGTAGAAAAATGGAGTTGCACACCATCTTGTGGGTGAAATTATGAAGTGTATCTCATATTGTGGATAGGCAAAGGCACTAGTGTTCGCAAGGACCAATACATTGGAGGGAAAGGGAAACAAGGTCGTTTTTAATTGTGCAGCAGTTGTTTGTTGTGTGTATTCTTTAGCTGAGATCGTTTTCTCCTttgattttgtaattgtaaaacaAGGAAGAAAAACTTAGTGTACTGTATAGTTATgcgtgggtttttttttccagttgatCCTTCCTCATATTACTTCCCTAAACACTCCCTATTAAAAGTAAACACACCCATTGAACCCATAACGTGAATGACTAAGTTTAAACCCAAAGTCTCCCAGACCAAGATGTGGATGTAAAGTGACATACATACAGTCCTTGTGTTCAGAATGGCAAACACTATGTTCATTATGTTACAATGTagagatatattttttataaagtgcTTATTGTCATCTTTTTGAAAGCATTAGTGGCTATATTGTATCATTGtgttgtgagaaaaaaaaaaaaaaagtatcctgAGATTTTTCATTGTATCACATGGATATTTAGGTTTTtgatttttcatgctttttatgctgaatcaaataataaaaacattttagaattgTTTGGTTAAAGGGCCTTTGCTTAATAAAACACTTGTGAACAGAAAGATGTGCTGCAGTA

Function

symbol description
wls Predicted to enable Wnt-protein binding activity. Acts upstream of or within several processes, including animal organ development; chondrocyte activation; and chondrocyte proliferation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endomembrane system. Predicted to be integral component of organelle membrane. Is expressed in several structures, including central nervous system; head; inner ear; midbrain neural keel; and neural tube. Orthologous to human WLS (Wnt ligand secretion mediator).

NR:

description
protein wntless homolog

GO:

id name namespace
GO:0016055 Wnt signaling pathway biological_process
GO:0017147 Wnt-protein binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043257685.1 True 2635 mRNA 0.43 12 7269715 7283810

Neighbor

gene id symbol gene type direction distance location
scinlb LOC107588891,LOC107700536,LOC107658127,LOC107568091,LOC107743367,LOC108280481,LOC106568976 coding upstream 1310 7257164 ~ 7268405 (+)
ccdc18 ccdc18,LOC107716953,LOC107658134,LOC107568077 coding upstream 15144 7236939 ~ 7254571 (+)
mtf2 mtf2,LOC107743365,LOC107568093 coding upstream 33602 7225090 ~ 7236113 (+)
rpl5a rpl5,LOC107568084,LOC107694375,LOC107743362,LOC107716952,LOC103368809 coding upstream 63313 7203301 ~ 7206402 (+)
rpap2 rpap2,LOC107716948,LOC107716950 coding upstream 84701 7176935 ~ 7185014 (+)
dmbx1a dmbx1a,LOC107588924,LOC107743378,LOC107700538,LOC107551711,LOC107684938,LOC108442545 coding downstream 56461 7340271 ~ 7346655 (+)
ptger4c ptger4c,LOC107716941,LOC107700513,LOC107743379,LOC107684935,LOC107564388,LOC107551710 coding downstream 104608 7388418 ~ 7391035 (+)
glula LOC107563291,LOC107710552,LOC107700548,LOC107732203,LOC107553252 coding downstream 1031321 8315131 ~ 8318467 (+)
elovl1a elovl1a,LOC107553254,LOC107732201,LOC107700551,LOC107710545,LOC108438881,LOC103047025 coding downstream 1089428 8373238 ~ 8382443 (+)
cc2d1b LOC107563292,LOC107710553,LOC107700553,LOC107677533 coding downstream 1103067 8386877 ~ 8403214 (+)
G10021 NA non-coding upstream 58777 7210738 ~ 7210938 (+)
G10020 fam69a,fam69aa,LOC107716951,LOC107568082,LOC107694372,LOC108436064 non-coding upstream 59781 7206507 ~ 7209934 (+)
G10013 NA non-coding upstream 70178 7197090 ~ 7199537 (+)
G10012 NA non-coding upstream 73315 7189655 ~ 7196400 (+)
G9940 NA non-coding upstream 218721 7050725 ~ 7050994 (+)
G10094 NA non-coding downstream 136632 7420442 ~ 7421878 (+)
G10112 NA non-coding downstream 197820 7481630 ~ 7555541 (+)
G10127 LOC107551707,LOC107564386,LOC107743377,LOC107684933,LOC107710549 non-coding downstream 283500 7567310 ~ 7670458 (+)
G10145 LOC107564386,LOC107743377,LOC107684933,LOC107700544 non-coding downstream 327458 7611268 ~ 7612187 (+)
G10179 NA non-coding downstream 501668 7785478 ~ 7785832 (+)
lrrc53 LOC107700485,LOC107588905,LOC107716924 other upstream 163923 7098303 ~ 7105792 (+)
G9925 LOC107563058,LOC107549254 other upstream 282596 6986298 ~ 6987119 (+)
G9889 NA other upstream 577340 6691668 ~ 6692375 (+)
G9887 NA other upstream 578936 6690372 ~ 6690779 (+)
sst2 LOC107549725,LOC107710806 other upstream 901761 6367177 ~ 6367954 (+)
gng12a gng12a,LOC107700509,LOC107716954,LOC107551713 other downstream 1860 7285670 ~ 7300101 (+)
G10108 NA other downstream 220812 7504622 ~ 7582385 (+)
G10212 NA other downstream 823055 8106865 ~ 8107777 (+)
olfm3b olfm3b,LOC107700521,LOC107710604,LOC107745696,LOC107680049 other downstream 1878801 9162611 ~ 9171915 (+)
arpc5a arpc5a,arpc5,LOC107722639,LOC107693740,LOC107564704,LOC107677751,LOC107718183 other downstream 2462760 9746570 ~ 9751212 (+)

Expression


Co-expression Network