G645


Basic Information

Item Value
gene id G645
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 1842322 ~ 1843168 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU754
ACAACCGTCCATACCGCTGTGATGAATACGATCCTCAATTGGATGGAACTGGAATAAATACTTTGAATGTTGCGATCCTGTCGGACTTATGATAGCTACCTGAATCGTAACAAAGCACTGTTGGCCAGAGGAGAACTGGCCCCCCGACTAAGCCTGGTTTCTCCCAAGGTTTTTTTCTCCATTTAAACACCTATTTGCCACTTGTCTGCCACCTGATGGAGTTTGGGTTCCTTGCCGCTGTCGCCTTTGGCTTGCTTAGTTGGGGACACTTGACATTTGACTTGACATTTGATATTCAACAGTGCTTTGATCTGCCTGCATTGACACTATTCTTTTAAGAGCTGCTGTGCAGCCAAATAATGTACCAGTTATCAATGTAAAGCTGCTTTGACACAATCTACATTGTAAAAAGCGCTATATAAATAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU754 True 428 lncRNA 0.40 2 1842322 1843168

Neighbor

gene id symbol gene type direction distance location
CI01000000_01680507_01690297 CPLX2, CPLX1, CPLX1.L coding upstream 151128 1680507 ~ 1691194 (+)
CI01000000_01511690_01517631 IKBKAP coding upstream 324603 1511690 ~ 1517719 (+)
CI01000000_01459294_01485147 SLC44A1 coding upstream 357011 1459294 ~ 1485311 (+)
CI01000000_01405606_01410241 NIPSNAP3A coding upstream 431819 1405606 ~ 1410503 (+)
CI01000000_01347674_01352321 NA coding upstream 489094 1347674 ~ 1353228 (+)
CI01000000_01848610_01851296 NA coding downstream 4375 1847543 ~ 1851898 (+)
CI01000000_01879407_01879559 NA coding downstream 36239 1879407 ~ 1879980 (+)
CI01000000_01898604_01899281 NA coding downstream 54874 1898042 ~ 1899281 (+)
CI01000000_01899373_01901550 TSTD2 coding downstream 56205 1899373 ~ 1901682 (+)
CI01000000_01916310_01925119 NA coding downstream 72884 1916052 ~ 1925390 (+)
G593 NA non-coding upstream 107933 1733247 ~ 1734389 (+)
G576 NA non-coding upstream 135337 1706770 ~ 1706985 (+)
G428 NA non-coding upstream 351975 1487224 ~ 1490347 (+)
G520 NA non-coding upstream 438188 1403153 ~ 1404134 (+)
G699 NA non-coding downstream 75564 1918732 ~ 1918942 (+)
G700 NA non-coding downstream 76088 1919256 ~ 1919564 (+)
G710 NA non-coding downstream 180593 2023761 ~ 2023971 (+)
G717 NA non-coding downstream 194865 2038033 ~ 2038258 (+)
G718 NA non-coding downstream 195309 2038477 ~ 2038716 (+)
G435 NA other upstream 409468 1425121 ~ 1432854 (+)
G350 NA other upstream 1165385 671842 ~ 676937 (+)
G252 NA other upstream 1335250 503209 ~ 507072 (+)
G2774 NA other downstream 2610610 4453778 ~ 4454232 (+)
G2850 NA other downstream 2882818 4725986 ~ 4726482 (+)
G6811 NA other downstream 8361663 10204831 ~ 10321679 (+)
G6820 NA other downstream 8584055 10427223 ~ 10433018 (+)
G7018 NA other downstream 9135321 10978489 ~ 10980872 (+)

Expression


Co-expression Network