atp1b3a (atp1b3a,LOC107700561,LOC107563307,LOC107710617,LOC107732952,LOC107677716,LOC107553263)


Basic Information

Item Value
gene id atp1b3a
gene name atp1b3a,LOC107700561,LOC107563307,LOC107710617,LOC107732952,LOC107677716,LOC107553263
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 8590241 ~ 8599595 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258048.1
AGGATTTGAAAATGAAGAATGGTTCGTCCCGAGAAGGCACGAGAAGCGCTGCAATGCAAACTCGACGACATTTAGAAAGAGCCCTAAGTGAAAAAGTGACTTAGCAGGGCATATTTTAGTTAATGGTTTAAGAGTAAGCGCCTTAATAGCTGAACGGTTGTAAAAGATTAGAAGATGGCGAGGATCTGAGATGCTGGCGTTGAGATCACGCaccaaaacaaagcaaaaacctACGACAATAAACGCTTATCTCGTTTTATGCTAAAATGTAGCTCCTGGTTTTTCATGTTTCAGTGAAAagatatatagtaaaatattgcACGTGATACTGAATAGGATAAATATAGGCTACTATTTGGTTATTTTACGTCTCTTTGTTGCTGAATGTATAGCTCAACAAGAACACAACTGCTTTACTAATGTCTGTAAATTAGTAATTACTACCACATTTTCTGGCAAACACAAAACTcgtgattaaaaaataattatctgCTTTGTAGATCTGTATTGAAAAGGCAAGGTTAAAGGACATTTCAAAGATGTTTAagtaaaatacatgttttgccatacctgtttttctgtttatacaGCTATTACACCATCAGAAGCTAAACTAACCGGACACCGGGTTAACAGGTTATAGAGAAGAACAAAGTAAAATCCATCGAGGAGTTTGCAGGGTATTTTCTCAACTAAGGGAGAGTCGGATGCTTGCAACACTTTTTTGCGTTTCACAGTTTTTGCATTAGTAAACCAGAATTTTAACACAATAAAGCCACATGTGTCGGCTACTCACCCACATCACTGTAACGTGCATATACGATTATGTACATATTATACATGTTATGCTTAAATTGACAAAGTCAAATGTTGCAACAACAGGAGACCACTGCAACGGTCCACAGGGACAGCTCTAACAGTTCTAATATTTGTGCATAGACGCGGTCTTTAATAAGTTAAATCGGCTGTATAAAACAAAGAATAATAcataagaaaaaacatcaagaaGTTACAACGTTGTCTTGGTTGattattacaatacatttgAAGTGCAAAATATTAACGTAATCCGAATCTAAATTTAATGATAGTCTACTTCTGTTAACGTCTATGCAAAGGTTACTGAGCTAAGGCCAGTTGCATGGACATAATCACTAACTTAAGACTGTCTTAAGAACTAGTCCGACCAACTAGCAGTGTATCAATGTTATGGTAAGGGACAGCATGTTTGCAACAACATGTTGCAGCTGTCCTTGACAGCTGTGATAAAACTTGGTATAATAGCTTGGCACAATATCTTTGACACGTGCTATGCTTATTAGAAGCTAAGAAAACACCGATATAAATCAGGTTTTAACAATACTTTACGCACACAATCTGATcattaaaagtactttttttataccgtgaaagtaatttttttgtaaaaggaATGGTCACGCGGGCATCCCGCTTCTCCCCTACAGACCACGCAGTATTTGGTAAGGCAGTGGGCTCTGAGgattagtttttacttttttgcagCCATAACTTAAACATTGCACAAGCACATAAtgagaaaactgaaaatgaatgaaaactgcaaaaatgacCCTAGCCTGTAGTAAAGACATCTTAAATAACGTCATCTCTGCATAAATAATGACATGAGCGATTTCATATTCGTAACGTGTCATGTCGTGATTATGAaggtataattaaaataatacatgacaAACAGACCCTGTGATCTGGGCTAAATTTAGAGGATACTGCAGTGATGGAATCGCCTCTGAtcagaaaaatattgttttttaaaaccaatttgGCAACATTCAGGTTTTCTTGAAGAAATGGAGGAGTTCAACCAATTTAATTGGACAGCTCCAGCAGGGTACACAACCCTTTCACCCTCCCGTTTAAgaaattcttcttttttgcGTTACATAAGTCTTCTGTGTTTACTGAGGTCTTGCTTCTAATTAACAGCACTGTCTGATTACAGCTGAACGCAGAAAGCTGAAGACAATTGCGATAGCATTCAATTTTGCTCTCTCTTCTCTAAAACACAGATCaagttttacaagaaaatactatttcagtctttctacttcaaatctgttaaaacgTATTGATCAGAGGCTATAGCCTAAACCCGTTTGTGTTGAAGTCGGCGGTCGAATTTAATCTTCACAGAATCTTAGAATGAGTGTCATATGTGTTTCATGACcatgaaagcatttatttggtGCCAAAATGAGAAACTAAACACATTTTGTAGGCTAATTAATCACCAAGTGGCATTTAAATAACCATTGTTGTAAACGTTAGCAtatcagtttagttttttcatgCACATACATAACTGCCACCTGAAATCCTCAGCGCCCACAGACACCAAGCTGCTCAATAAAAAAGCGTAATCAATTTGCAGCAATTTCAGGGTCGCATAGTTTACGCATGCGCAAAAGCGTTCCCTCCCCCCACAACATAACGTGCTGCTGTCGGTCCGGGGTTTTTTTTGGAGCAGTTTGGCATCAGGAGCGTTGCGGTGCGTTTGGAGACGGCGAAGGCCAGAGGTTCTTTGCTCTTCATCAGGGCATCAGCCCACCGAGATCAGCCTCATCGGACCAGGTCGCATCACACCTCGTTTCAAGCATGTCTAAAAAAAGCGAAAAACCAGCGGAGGGCAAAGAGCCCGAGAGCAGCTGGAAAGATGTGATCTACAACCCAAGAACTGGAGAATTCTTCGGTCGGACCGCGAGGAATTGGGGTCTCATCCTCCTCTTTTACTTGGTCTTCTATGGCTTCTTGACCGCCATGTTCGTCTTCACTATGTGGGCGATGCTTCAGACGCTGAATGACGATGCACCAAAATATCGAGATCGTGTTGCATCCCCAgGGTTGGCTATCAGGCCGAACTCTTTGAATATAGTTTTTAACAGATCAGAACCTCTCGAATACGGCCAGTATGTCCAGCATCTAGAATCGTTTCTGCATCAGTATAATGACTCGGAGCAAGCCAAAAATGACTTGTGTATGGCGGGTCAGTACTCTGAGCAGGATGAGGAACCTCAGAAGAAGGTGTGCCAGTTCAGGAGGAGTTTACTCCAGCGTTGCTCAGGGATAGAAGACACCACTTTTGGGTATGCTAAAGGAGAGCCGTGTGTTATTGTCAAGATGAATAGGATCATCGGTCTTAAGCCAGCTGGAGATCCATACATCAACTGCACATCAAAGaGTGGGAAACCTCTCCAGATGCAGTATTTTCCCCAGGAGGGGACTATTGATAGGATGTACTTTCCTTActatgggaaaaaaacacatGAGAGCTACGTTCAGCCTCTGGTTGCTGTAAAGCTGTTGCTCAAGAAGGAAGACTACAACGCTGATCTGATTTTAGAGTGCAAGGTAGAGGGCTCCAACCTCAAGAACAACGACGAGCGTGACAAGTTTCTCGGTCGCGTCACCTTCCGGGTCCTGGTGACCGAATAGAGCAGCTGCTGGTGCGGACGCTAAAGGGAAACTTGCACTACTCTTCTCCCCGTTGTCCTCTCCCCCTTTTAAACCCCCGCCGTACGTCCTGCGGCTCCTCAGCAGGTCTCAAGGACCTCATTTAACTCTCCACAGACAGGCATGACCGATTGATTTCTGTTAATGAATCCCACTCGCCATGTTTTCACAGGATCCCTGTTTAGTCTTCCGTCTAGCACCGCCTCCTGCTGAAGACGCGAGCGTCTCCgaacatttaattgtattttaaccCTGGGCCCTCGCGTTCCCTAGATGTTTGGAATTCTTTAACGTCATTACTTCGTACCCTTAAAGggattttgtttacattgtgaTTGATGAGACGGGTTAGTCGCTATCTTAATCCTTAgttggtgtttttgtgtttgtgttgctcTGTGTGGATATATTTAATGATCGTATTGTCATATTGATATAAGAtttatggttaaaaaaagaaaagaaaaaaaaagtggcattaTTTGACAcgtttttgaaatatgaaatacgTAAAGAGCCAAATTTGTAACCTAAATGATTCTCGCAACCTCTGCGTGGATCCTCGTTCATGCAGAAGCCTTAAGAGCCATTTAACATCTTGGTACAAATGCTATTTTGacaaataaagagaaaacaagcAAGTGGTGGTTGTAGATTTGTCTGTAATATCCCGAACGTACCACACGGCGGCGATAGGATATAATGTTATCTagcagcaacttttttttttatactaggAACTTAAAAATGATAACGGCTGTGCtaagtagcattttttttgtatttacaacTCTCTTTCTATACTGAATCATGTTTTCGGTGCCACGTGTCGTATTCGTTTACCTGTTACATGTCACAGTGCTCAACCAAACGTAGCGCTGTCCGTTCCTGCCAACAGCTATCAATAAATCAGCAGTTTGCGTCAGCTGATTAGTTGACCACATTTAGTTACAGACACGGGAATCTGCTTCGGTCTGTACATAGACGGTCTTTCGCGCTGGACAGTGTTTCAGGTAATCGATGCAGTCATCTATCACAATCATTTTTGAAagagcattattattattattactactgctTAATTTATCAAAGTTAGTTTATTCTATTGACAGTCCCTGTTTTCAACCATAATAAAAAACTGATCTGGTTTGTATGTTCTAAGGTTTATACAGGGGAAAAAACTGCCAAGTAATTTCCAGATGATATAATTATTTGCTTTGGTCTGTgacaatataaatgataatataaaaattagtgctgtcaaacgattaattgcatccaaaataaaagttttttgtttactcaa

Function

symbol description
atp1b3a Predicted to enable ATPase activator activity. Predicted to be involved in cellular monovalent inorganic cation homeostasis and inorganic cation transmembrane transport. Predicted to act upstream of or within potassium ion transport and sodium ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of sodium:potassium-exchanging ATPase complex. Is expressed in several structures, including anterior axial hypoblast; immature eye; mesoderm; nervous system; and neural tube. Orthologous to human ATP1B3 (ATPase Na+/K+ transporting subunit beta 3).

NR:

description
PREDICTED: sodium/potassium-transporting ATPase subunit beta-3

GO:

id name namespace
GO:0006813 potassium ion transport biological_process
GO:0006814 sodium ion transport biological_process
GO:0005890 sodium cellular_component

KEGG:

id description
K01540 ATP1B, CD298; sodium/potassium-transporting ATPase subunit beta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258048.1 True 4798 mRNA 0.40 7 8590241 8599595

Neighbor

gene id symbol gene type direction distance location
clcn2a clcn2,clcn2a,LOC107732945,LOC107710554,LOC107677884 coding upstream 103337 8439879 ~ 8486904 (+)
cc2d1b LOC107563292,LOC107710553,LOC107700553,LOC107677533 coding upstream 187027 8386877 ~ 8403214 (+)
elovl1a elovl1a,LOC107553254,LOC107732201,LOC107700551,LOC107710545,LOC108438881,LOC103047025 coding upstream 207798 8373238 ~ 8382443 (+)
glula LOC107563291,LOC107710552,LOC107700548,LOC107732203,LOC107553252 coding upstream 271774 8315131 ~ 8318467 (+)
ptger4c ptger4c,LOC107716941,LOC107700513,LOC107743379,LOC107684935,LOC107564388,LOC107551710 coding upstream 1199206 7388418 ~ 7391035 (+)
atr atr,LOC107677746,LOC107700496 coding downstream 30817 8630412 ~ 8651546 (+)
amer3 LOC107710619,LOC107700565,LOC107677756,LOC107732953,LOC107553265,LOC107569737 coding downstream 52322 8651917 ~ 8662323 (+)
LOC122361595 LOC107710620 coding downstream 231225 8830820 ~ 8841734 (+)
LOC122359011 arhgef4,LOC107700563,LOC107710620,LOC107553266,LOC107732940 coding downstream 248732 8848327 ~ 8878100 (+)
vav3b vav3b,LOC107700567,LOC107732951,LOC107677852,LOC107553269 coding downstream 291178 8890773 ~ 8929310 (+)
G10284 LOC107710615 non-coding upstream 1167 8587377 ~ 8589074 (+)
G10271 NA non-coding upstream 28728 8560098 ~ 8561513 (+)
G10226 NA non-coding upstream 61534 8522402 ~ 8528707 (+)
G10219 pbx1a,pbx1b,LOC107677498,LOC108272157,LOC107564502 non-coding upstream 327411 8219265 ~ 8262830 (+)
G10198 NA non-coding upstream 499705 8081817 ~ 8090536 (+)
LOC122356731 NA non-coding downstream 163244 8762839 ~ 8765451 (+)
G10371 NA non-coding downstream 198996 8798591 ~ 8798996 (+)
G10374 NA non-coding downstream 280347 8879942 ~ 8880453 (+)
G10431 NA non-coding downstream 329909 8929504 ~ 8930073 (+)
G10433 NA non-coding downstream 340374 8939969 ~ 8941186 (+)
G10212 NA other upstream 482464 8106865 ~ 8107777 (+)
G10108 NA other upstream 1007856 7504622 ~ 7582385 (+)
gng12a gng12a,LOC107700509,LOC107716954,LOC107551713 other upstream 1290140 7285670 ~ 7300101 (+)
lrrc53 LOC107700485,LOC107588905,LOC107716924 other upstream 1484449 7098303 ~ 7105792 (+)
G9925 LOC107563058,LOC107549254 other upstream 1603122 6986298 ~ 6987119 (+)
olfm3b olfm3b,LOC107700521,LOC107710604,LOC107745696,LOC107680049 other downstream 563016 9162611 ~ 9171915 (+)
arpc5a arpc5a,arpc5,LOC107722639,LOC107693740,LOC107564704,LOC107677751,LOC107718183 other downstream 1146975 9746570 ~ 9751212 (+)
znf414 LOC107722538,LOC107564712,LOC107693731,LOC107691619,LOC107718126 other downstream 1312033 9911628 ~ 9916861 (+)
selenof selenof,sep15,LOC107693704,LOC106598901 other downstream 1558937 10158532 ~ 10161809 (+)
lyrm4 lyrm4,LOC107718092,LOC107688446,LOC107722638,LOC107689406,LOC107688520 other downstream 2063134 10662729 ~ 10665110 (+)

Expression


Co-expression Network