niban1b (LOC107722650,LOC107693736,LOC107564706,LOC107718132,LOC107677773,LOC107589866)


Basic Information

Item Value
gene id niban1b
gene name LOC107722650,LOC107693736,LOC107564706,LOC107718132,LOC107677773,LOC107589866
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 9781765 ~ 9805690 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258980.1
TGTTGACGGGGCTGAGAGGATAAAGCGGGCGGCGCTGCTGCAGTTTGAGGAAGTTTGAGATGCTTGAGTCACAGTTTGTTTGCTCTCGTCATTATCTGACAGTCAAAATAGGCGCTGCGCTTCAAAACCGGACCGGACTAATAACGGGAAGAAACCTCCGCTCGGGACCGCCGCGACAAACCACGCTACACAATGGGAGCATCCTCATCCAGTCTGTTGGACGAGAGTAAAATAAGCTACATACGAGgCCGGACAGAGGCAGAGCTAAAGAACTTTAGTCCTCATTACAGAAGGCAAAGTTGTGTTGCCTTCTTTTGCCATCTGAAGGATGAGGTGGAGCAGCACAGAGCAGGACAGGCCCAGCTCCTCAAACAGAAGGAGCCTCTGCAGGCCTCAGAGGTCCTGTACAAGGATAGCGTGCTTTACTTTGATGACAACAGAAAGTGGAGAGAGAGATTTGTCGTGGTCCTTGCCGACCATAGCCTGGAGCTACACGATAGCCAAGAGTCATATTCAAAGGGAACCCCAGCCCGTCACAAACTCCTCCCAACAGGGGGCACAGTGTTGACCTCAGAGGAGAAATACACTGCTGTCGTAGACAAGGCCTTCCCTGATCCCAACGGTTCTAAGGAAGAGCCATCCATTCCTCTGGTGGTGGTTCCCGGTCCTCTTCCGGTGTACCTGAGACTGCCTTACAGACGAGACTCGTACTTCTGTTTCCAGCAGGAGGAAAAGCGGGCACGCTTTGTCTCGATCCTGAACGACTGCATTCGGCATCAGAACCAAGATCATCTGAAGAGTATGGAATGTGAGGTGCAGGCTTTCCTAAAGGCCATTCACTTCTACAGGCAGGAGAAGGGTCACTATGAGTCATGGGACATGCTGGTGGGCACTGACTATCAGgtGCTGACTAACCAGGTGATGGAGGAGCTGCTGCCCTCGCTGCAGACAGAGCTGTTGCCCAAGCTGAAGGGAAAGAAGCCGGAGAGGAAGAGGGTGTGGTTTGCGACAGTGGAAGCGACCTACGAGCTTGTGCACGAACAACTGCGAGGAGGATTGGAGAGTTTGAAAAACGAGTGCAGAGAAGCCACCAAACAGCAGGAGGCGCTCATCCGCTCAGATATGGACCAGATCATCAACTCTCAAACATTCTTGGAAACTAAACTGCAAGCTCTAGTATCAGAGCCAGCTGTAAAATACTGCACCGAGAGCGTGGCTCCATACCTGACCTCAATCCTGGAGGAGTTGATGGGTCCGGTCAGCGCAGGCTTCCAGGCCGCGAGGCTGCTGCTGGAGGACGAGCTGACCCGAATCTGCAAGGATTTCCCTCAGGGGGGAGTCACAGAGGAACTTCAGAGCGCTTTGCAGAAGGTGGGTTGTGACCGGATTGAGGACTGTTACCAGCATGTGAACGTCCTGAAGGAACAGCTCCAAGAACTTCGCAACCGCTTCAAGTTCTCCAACTCAGCACGAGTAGTTCACGGCACCCAGAGTCAAATGCAGCAGTTGATGGAGAATGCCGTGTACACATTTGAGCTCCTGCTTCAGTCTGCCTTAAAGGACAAACCTGACAAACAGGCCTCGGTCATGGAGAAAGCCAAGCTGCGTGTGCTCAAGCAATTCGACTATGACAGCAGCACAGTAAGGAAGAAGATTTTCCAAGAGGCCCTGGTTGACATCACTCTGCCAGCCATTAGGAGAAACCTGGCGCCTGCCTGCAAAACTGAGCTTCAGAATTTTGAGCAGTTCATCTTTGCTGATTACACAAACTTTGTTCAAGTGGAGAATGTCTACGAGAACATACTGCTCAACCTTCTGAACAATGAAGTCAACAAAGTGGTGAAAGAGGCAGCCAGTCTGAAGAAGAACAACCTGTTTGCCGACAGTACTGACCTGCAGTGTGTTAGCCAAAGCAGCCTGGCCGACAGCCGCACGCCGCCCCTCTCTGCCCCCTCCAGCCCACCACAGGTACcggcctctgtggctctctctcaACAAGCAGAGCAGAAGATCAGCGAAGACACCCATCAGACAAACGAGTCTTCAGTCATCCCTACAGTGAAGATTACAGTATCTTCTCCAGAGCCCACATCACCGTTAAATGTTTCCCAACCAACATTACCTAATAATTCATCACCCATTCCAGAGGTCTCAGAGACCGAAGTGTCCTCAACCAAACCAGAAACCATCGTACCTGCAGAAGATTCACCTGCACAATCAGAGACACCTTCTTCTAAAGAGAAGGATGAAGTTACAGAAGGATCTTCTGTTAGTACAGATCGAGCAGTCTATCTTAACTCAACGGCTGAAGAAGCTCCTGTTTCTCTCGTCATTGCCCCTGAAACCCTAAACGTGGAAGCAGACGAAGAAAGCAAAAGTGTAAGTCCTCCCAAGTCTGAAATCGAAGAGGAATCTGTCCAACCTGACGTTAACCTGACAATCAGTGCTGAAGTTCTGCCAGATGTTTGTGCTGAAGACACTGCTGTGGGTGCCAGTGTTTCTGATGAGCACGTTGTTGTGGATAACGAGGCATGCGAGGCAGAGCCTTCTAGTAATGAGAATAGAAAAGAAACACAGGACAGTCCCGCTGCCGAtgcttctcctcctcctctccactCGGTTCCTGATGGTCTGGCAGAGGGCGCTGTTGGTTTAGCATCAGATCCGGAGGCCCAGATTTGCGCTGTGAACACCGATTCCCAGGAAGAGAGCGCTGGCAATGTGCAGGCTATCAGAGATCTCATCATGGAGATCATCGAGGTAGAGGATGTAGTCAGACCTTGTGCTGAAAACCAGCCTTAAAACAGTTTGAATGAGGTTCAGATGGATTTTTATCAACTATTTAGCtctgttaaacaaaacaaactacagTGTTcccatttaatattttctattttttagtTAGGTATTTTTTCAtacacattttctattttcagtaataatccaaatattgaaattaaattgttatgaataaaaaaacaattgccTATATAAAACAGAATTCTTTTTGTAACACTGTATCTAATGACATATtaacaaaaaactatatatgcACATGAATAATTGTATAGCTGTTTGCAATTTTTTCAGTAGTTAATTTTAATGATGAagcttgtatttttaaaaaatataaaggaaattaaatggaaaaaaaatagaaactctacatttttagatggtacacaaatgtttttttggtggACTGACTAATTTATTAAAGTGTTGTGCTGGTTTGTACAGACAACTCATTCTTTATCGTAAATAACAGATCAAGTGCTGATCactaaacaattattttgtacCATTCTGTAGGTTTTCTGAAAATGAGACGCAGTACCTTTGTACATACGATGATCACAGTAAGAATCTGTTAAATAAATTTCAACGAAACAGACAATTCACCAgcgtattgttttatttcttctcttCGCAGGTAAAGTCCATTCACATTAATCTGTCAAAGTCACAGGATCATTATAGCAGCAAAGGCCAAGATGTTAGGAGGCACATTTTGTGTCTGGAAATACAGAGCGGTCCTGAATTCACTGagatacattaaaatttaatttaagacAGTAAAATACAACTTAAAAATGAACAGACGCAAAATACATCTCAATCAGAAACATAACCAAATTAAAACGGCATGAAATAGTACCAGAGGCAGCATTTAGCACCTtacttaaaagtgttataagaCTTTTTTCACAGCAATGACCCGTGGACATTATTAGGTAGTTAATTCATAAATATCTCTTAGAGGAATAATGCCTACTTATTTAAGCTATCTAACAGACAAAGCATATAGTTTTGTTATACGTGACAATTAGtgcaagatattttgaataaagtgAGTGATGCTACATCGTTATAAAGTTGTTTATGCAGTCAGCTCTGGTTAATGAGAACAGGATAAATAGGTCAATGAGTAACATTTTAGCTGATTATGATTTTGTGAATATGAAGATGAGAACAGATTCATTCCAGTTCTATAACTATACTGTATACTATTAAAGTGCACtccctaaaacctaaaaaaaaagaacctaacataaaatg

Function

NR:

description
PREDICTED: protein Niban-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258980.1 True 4059 mRNA 0.45 14 9781765 9805690

Neighbor

gene id symbol gene type direction distance location
ivns1abpb ivns1abpb,LOC107722586,LOC107693739,LOC107718136,LOC107589867,LOC107677749 coding upstream 15439 9758179 ~ 9766326 (+)
pla2g4aa pla2g4aa,LOC107722605,LOC107693742,LOC107718137,LOC107677770,LOC107594671,LOC107589895 coding upstream 36657 9731529 ~ 9745108 (+)
odr4 c2h1orf27,LOC107693744,LOC107722540,LOC107718140,LOC107589896 coding upstream 71914 9702238 ~ 9709851 (+)
prg4a LOC107594674,LOC107722510,LOC107693698,LOC107589871,LOC107677759 coding upstream 99796 9676255 ~ 9681969 (+)
rxrga rxrga,LOC107693746,LOC107677771,LOC107718143,LOC107589872,LOC107722630 coding upstream 109248 9658386 ~ 9672517 (+)
prrx1a prrx1a,LOC107693734,LOC107722649,LOC107564708,LOC107589863,LOC107718131,LOC107691682 coding downstream 45595 9851285 ~ 9856761 (+)
mllt1b LOC107722626,LOC107718125,LOC107564713,LOC107691596,LOC107589857 coding downstream 111641 9917331 ~ 9927244 (+)
sap130b sap130,sap130b,LOC107693727,LOC107691745,LOC107589892,LOC107722618 coding downstream 122736 9928426 ~ 9940747 (+)
myo7bb LOC107693708,LOC107722614,LOC107564725,LOC107589856,LOC107691586 coding downstream 137171 9942861 ~ 9961475 (+)
agxtb agxtb,LOC107722583,LOC107718120,LOC107693722,LOC107691560,LOC107585700,LOC105899541,LOC103036651,LOC108432502 coding downstream 230849 10036539 ~ 10040853 (+)
G10604 NA non-coding upstream 177922 9602366 ~ 9603843 (+)
G10581 LOC107722512,LOC107693701,LOC107594678 non-coding upstream 204359 9577171 ~ 9577406 (+)
G10571 NA non-coding upstream 208972 9486177 ~ 9572793 (+)
G10557 NA non-coding upstream 327020 9454366 ~ 9454745 (+)
G10466 NA non-coding upstream 565101 9215505 ~ 9216664 (+)
G10674 kifap3b,LOC107693735,LOC107564707,LOC107722509,LOC107718166 non-coding downstream 19925 9825615 ~ 9826220 (+)
G10738 NA non-coding downstream 183453 9989143 ~ 10010746 (+)
G10749 NA non-coding downstream 187094 9992784 ~ 9993395 (+)
G10752 NA non-coding downstream 206247 10011937 ~ 10014366 (+)
G10753 NA non-coding downstream 208869 10014559 ~ 10015822 (+)
arpc5a arpc5a,arpc5,LOC107722639,LOC107693740,LOC107564704,LOC107677751,LOC107718183 other upstream 30553 9746570 ~ 9751212 (+)
olfm3b olfm3b,LOC107700521,LOC107710604,LOC107745696,LOC107680049 other upstream 609850 9162611 ~ 9171915 (+)
G10212 NA other upstream 1673988 8106865 ~ 8107777 (+)
G10108 NA other upstream 2199380 7504622 ~ 7582385 (+)
gng12a gng12a,LOC107700509,LOC107716954,LOC107551713 other upstream 2481664 7285670 ~ 7300101 (+)
znf414 LOC107722538,LOC107564712,LOC107693731,LOC107691619,LOC107718126 other downstream 105938 9911628 ~ 9916861 (+)
selenof selenof,sep15,LOC107693704,LOC106598901 other downstream 352842 10158532 ~ 10161809 (+)
lyrm4 lyrm4,LOC107718092,LOC107688446,LOC107722638,LOC107689406,LOC107688520 other downstream 857039 10662729 ~ 10665110 (+)
G10979 LOC107722568,LOC107585289,LOC107688450,LOC107718087,LOC107689412 other downstream 905440 10711130 ~ 10718194 (+)
LOC122359491 tesk2,si:dkeyp-75h12.2,LOC107585988,LOC107679327,LOC107602527,LOC107728975,LOC107714850,LOC107674209,LOC107562290,LOC107668671,LOC107588168,LOC107691921,LOC107753974 other downstream 1314164 11119854 ~ 11135991 (+)

Expression


Co-expression Network