kifap3b (kifap3b,LOC107564707,LOC107693735,LOC107718166,LOC108444490)


Basic Information

Item Value
gene id kifap3b
gene name kifap3b,LOC107564707,LOC107693735,LOC107718166,LOC108444490
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 9805029 ~ 9830206 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258992.1
TCCCGTCCCTCTCCGACCCTCGGTGATAGCGGATCAGACTCGGTACGGTGCGGATGAGATGAGCGATGCTTTGATTCTCATTcatgtcaacatcctgaacagAAGCCGAGCCGACGTCTCTCGCTTTCACATGAACGGAATAAAATGCAGCCGGACGAGTCGCAGTATGTGCAACGGAAGTGTAGGACTGGGGATATAGATGTGCATCCAACAGAGAAGGCTCTAGTGGTGTACTATGAAGTGGAAGCATCCATTTTAGGAGAGACGGGCAATGCCAGGCATGAGGAGAAGAAAGAGTGCCAGAAAGTCATCCGCCTGAGGAGCCTGAATGCCAGCACTGATGTATCTGCCCTGGCTAGAAAGGTGGTGGAAGAGTGTAAAATCATTCATCCATCAAAGCTGGCGGAGGTGGAGCATCTGCTGCTGTATTTACAGAACCGAAAGAAGACCAGCAGTAAATTGgagaagaaggaaaagaaaCCATCGAAACCTAGAGAACTTCTGCCATTTGAAGGAATGGAAgTTAACGAAGAGGCCAATGTCAATAAAATGGATGATTATATTGAGCTGTTGTATGAGAGCATGCCCGAGAAGATTAGAGGCTCCACTCTGATCCTCCATCTGGCCCGTAACCCTGATAACCTGGAGGAGCTCCTACATAATgAGGCTGTGCTTGGGGCTCTTGCACGGGTCCTGAGAGAGGACTGGAAACACAGCGTGGAGCTAGCGACTATTATCATCTACGTCTTCTTCTGCTTCTCAAGTTTCTCGCAGTTCCACGGGCTCATTATGCACTATAAAATTGGCGTGCTGTGCATGAACATCATTGAGCACGAGCTGAAGAAATACGACCTCTGGCAAGATGAGCTGGAGAAGAAGAGCAAGGCTTGTGAAGAGGACCCCGAAAACCAGAGCTTGCAGAAGGAGTATGAGAAAACCCTTAAGAAATACCAAAGCCTCCTGGTCAAACAGGAGCAGCTGCTGCGAGTTGCGTTCTACCTGTTGTTGAATCTGTCTGAGGACACCCGCAGCGAGCTCAAGATGAGGAACAAGAACATTGTGCACCTGCTGGTCAAGTCTCTAGACAGGGAGAATGAGGAGCTGCTGGTGCTGGTGGTCTCCTTCCTCAAAAAGCTCAGCATCTTCTTGGAGAACAAGAACGATATGGCTGAAATGGACACTGTAGAGAAGCTGGCTCGTctggttccatgtgaacaggaAGACCTGATGAACGTCACTCTGCGACTTCTCCTCAACCTCTCCTTTGACACGGGTCTGCGCACCAAAATGGTGCATGTGGGTTTGCTGCCCAAACTCACTGCTCTGCTGGGTGATGACACGTACAAGCACGTGGCGATGCGTATCCTGTACCACATCAGCGTGGACGACAAATCTAAATCCATGTTTGCGTATACTGACTGCATTCCTCAGCTCATGCAAATGCTCTTTGAACATGGCGAAGAGAGGATCGACACCGAGCTCATTTCATTCTGCATCAACCTGGCTGCTAACAAGACTAACGCTCAGATTATCTGTGAGGGTAATGGATTGAAGATGCTGATGAAAAGAGCACTTAAACTAAAGGACCCACTGCTGATGAAAATGATCCGAAACATCTCACAGCACGAGGGACCTCTGAAACAGCTcttcattGACTACGTGGGCGATCTGGCAGCTCAGATCAAGCAGGAAGGGGATGAAGAGTTTGTTATCGAGTGCTTGGGTACAATGGCGAACCTTAACATACCTGACCTGGACTGGGAGCTCCTGCTCAAAGAGTACAATCTGGTGCCCTACCTCAAAGACCACCTCAAACCTGGCTCAGCAGAGGATGACCTGATCCTGGAGGTGGTGATCATGATCGGAACGGTGTCAATGGACGACTCCTGTGCCGTCATGCTGGCTAAGTCTGGCATCATTCCTGCTCTTATCGAGCTGCTAAATGCCCAACAGGAAGACGATGAGTTTGTGTGTCAGATCATCTACGTCTTCTACCAGATGGTCTTCCACCAGGCCACCAGAGATGTCATCATTAAGGACACTCAGGCCCCAGCCTACCTCATCGACCTTATGCACGACAAAAACGTGGAGATCCGGCAGGTTTGTGACAACACACTGGACATTATCGCTGAGTATGATGAAGAGTGGGGGAAGAAGATCCAAAGCGAGAAGTTTCGCTGGCATAACTCTCAGTGGCTGGAGATGGTAGAAAGCAGACAGATGGAGGACGCCGAGCCCTACCTGTACGGAGACGACCCGGACGGTCTGGAGCAACCCGATCTCTTCTACAGCACTGatGGTATGATGGCCCCAGAACCAGGCCTGAGTCCAGACTTCTACAGCCAGTTCCACTCTCAGAACGGAGACTTCAACGCCTGCAACGGAGCCGACGGACGTCCTGCCACTGCCTACGGCTTTCGTCCTGATGAGCCGTTCTTCCACGGCTATGGATCCTCCAAATAGAGCTGCTGCTAAACACCATCTCAACGTCTGTCTTCTAGAAAACCAACCAATCTCTTCCAGAAAATATGAGCCCACCCTTGGATTTAAAGGCAGGTTTAATAGCGATATCCCATTAAAATGCTTGGTGATgctttataataacttttaattattcattaacaaACAGATCAGTAGTTCATTCAagtatgtaaaatgttattttatattcaaatatttatataagttACGAATGgacttttctcatttttttgaATGTATGCATACATGGTAGGCACTGCGTAATAATGATTACAGATTATTTGTGTACATTAtcttatataatgcatatttttatttatgaagatTATTAGTAAGTGCTGTAGTTCTGACTTAATTTGGGTTTAAGATGTCTTAATTTTACTACAATCTTAGAGAGACACATTCAGGGTACAATTTAATTTGCTTCATGCTTCTACCAACTGACTTTTTAATGACTACagttagattttaatttaaaaatagtctttattttttgcattttatgttaggttctttttttttaggttttagggaGTGCACTTTAATAGTATACAGTATAGTTATAGAACTGGAATGAATCTGTTCTCATCTTCATATTCACAAAATCATAATCAGCTAAAATGTTACTCATTGACCTATTTATCCTGTTCTCATTAACCAGAGCTGACTGCATAAACAACTTTATAACGATGTAGCATCACTcactttattcaaaatatcttgcaCTAATTGTCACGTATAACAAAACTATATGCTTTGTCTGTTAGATAGCTTAAATAAGTAGGCATTATTCCTCTAAGAGATATTTATGAATTAACTACCTAATAATGTCCACGGGTCATTGCTGTGAAAAAAGtcttataacacttttaagtaAGGTGCTAAATGCTGCCTCTGGTACTATTTCATGCCGTTTTAATTTGGTTATGTTTCTGATTGAGATGTATTTTGCGTCTGTTCATTTTTAAGTTGTATTTTACTgtcttaaattaaattttaatgtatctCAGTGAATTCAGGACCGCTCTGTATTTCCAGACACAAAATGTGCCTCCTAACATCTTGGCCTTTGCTGCTATAATGATCCTGTGACTTTGACAGATTAATGTGAATGGACTTTACCTGCGaagagaagaaataaaacaatacgcTGGTGAA

Function

symbol description
kifap3b Predicted to enable kinesin binding activity. Predicted to be involved in cilium organization and microtubule-based movement. Predicted to be part of kinesin II complex. Predicted to be active in axoneme and ciliary transition zone. Orthologous to human KIFAP3 (kinesin associated protein 3).

NR:

description
PREDICTED: kinesin-associated protein 3-like isoform X1

GO:

id name namespace
GO:0005871 kinesin complex cellular_component
GO:0019894 kinesin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258992.1 True 3639 mRNA 0.44 20 9805029 9830206

Neighbor

gene id symbol gene type direction distance location
rnf2 rnf2,LOC107718134,LOC107564705,LOC107693737,LOC107677769 coding downstream 24406 9776067 ~ 9780623 (-)
ptgs2a ptgs2a,LOC107594645,LOC107722606,LOC107693741,LOC107677761,LOC107718138,LOC107589869 coding downstream 75089 9726647 ~ 9729940 (-)
pdca pdca,LOC107594646,LOC107722648,LOC107693745,LOC107589870,LOC107677764 coding downstream 91469 9710793 ~ 9713560 (-)
tpra tpra,LOC107693743,LOC107722541,LOC107718142,LOC107589873,LOC107677758 coding downstream 102822 9681973 ~ 9702207 (-)
dusp12 dusp12,LOC107722526,LOC107589915,LOC107677752,LOC107718184,LOC107693747 coding downstream 153782 9648808 ~ 9651247 (-)
mfsd12a mfsd12a,LOC107693733,LOC107722641,LOC107564710,LOC107691677,LOC107718130,LOC107589862 coding upstream 42007 9872213 ~ 9879088 (-)
csnk1g2a csnk1g2,csnk1g2a,LOC107722536,LOC107718129,LOC107589861,LOC107691647,LOC107693732,LOC106925954 coding upstream 50235 9880441 ~ 9896499 (-)
mknk2a mknk2a,LOC107693729,LOC107722535,LOC107564711,LOC107718128,LOC107589858,LOC107691640,LOC108432510 coding upstream 69711 9899917 ~ 9910873 (-)
amotl2b LOC107693726,LOC107722615,LOC107691578,LOC107718124,LOC107589855,LOC107564722 coding upstream 136230 9966436 ~ 9973817 (-)
aire LOC107589913,LOC107691773,LOC107718121,LOC107579220 coding upstream 151779 9981985 ~ 9987455 (-)
G10708 NA non-coding downstream 56289 9748387 ~ 9748740 (-)
G10621 NA non-coding downstream 198834 9605638 ~ 9606195 (-)
G10562 NA non-coding downstream 343945 9457163 ~ 9461084 (-)
G10569 NA non-coding downstream 354103 9450560 ~ 9450926 (-)
G10518 ptbp2,ptbp2b,LOC107570490,LOC107594658 non-coding downstream 473786 9327802 ~ 9331243 (-)
G10773 NA non-coding upstream 95899 9926105 ~ 9927837 (-)
G10812 NA non-coding upstream 216612 10046818 ~ 10047373 (-)
G10869 selenof,sep15,LOC107693704,LOC107586130 non-coding upstream 328372 10158578 ~ 10160064 (-)
G10987 NA non-coding upstream 396012 10226218 ~ 10226856 (-)
G11057 NA non-coding upstream 836271 10666477 ~ 10666712 (-)
si:ch211-267e7.3 si:ch211-267e7.3,LOC107722581,LOC107594654,LOC107718186,LOC107589917,LOC107677774,LOC107693699 other downstream 186556 9606323 ~ 9618473 (-)
plppr5a plppr5,plppr5a,LOC107722655,LOC107693754,LOC107677753,LOC107589876,LOC108441579,LOC107718169 other downstream 285248 9491563 ~ 9519781 (-)
abca4b abca4,abca4b,LOC107564534,LOC107680047,LOC107745690 other downstream 594988 9182056 ~ 9210041 (-)
zfyve9a LOC107700554,LOC107563295,LOC107677579,LOC107553256,LOC107732202 other downstream 1377125 8403327 ~ 8427904 (-)
G10213 NA other downstream 1697241 8106856 ~ 8107788 (-)
hfm1 hfm1,LOC107722645,LOC107586144 other upstream 249976 10080182 ~ 10095857 (-)
pkn2a pkn2,LOC107693716,LOC107585639,LOC107722607,LOC107718113,LOC107691687 other upstream 289767 10119973 ~ 10139585 (-)
lmo4 LOC107722609,LOC107693715,LOC107691760,LOC107589910 other upstream 310729 10140935 ~ 10143709 (-)
ca8 ca8,LOC107693711,LOC107585586,LOC107691405,LOC107589840,LOC107722503,LOC102778484 other upstream 483827 10314033 ~ 10320403 (-)
G11011 chd7,LOC107585562,LOC107722533,LOC107688517,LOC107718105,LOC107589837,LOC107689390 other upstream 545857 10376063 ~ 10378211 (-)

Expression


Co-expression Network