LOC122358999



Basic Information


Item Value
gene id LOC122358999
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 21815200 ~ 21819162 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>XM_043259049.1
CTAAACCCCACCTCGTTTATGTGTGGCAACAAAGCGTTACaattttataatagtaatatcaaTTATAAGTATTAGATTATAATCTGAAATCGTGCGTTACCCACAAAAATggcagaaaacaaacaagaagagCAGCTGGACTTATGCGAAGAGGCCAGGTTTGTGGAGGAAAACTCTGCAAAACTTATTCAAGGGGGTTACTTCGGTGATTCCAATAGCAGATGAACTGCGCAGCAAGGGCATGATGCACAACGAAAAATATGCAGAGATCAAAAAGGAAAGAACAGATCAAGATCGAATGAGAAAGCTCCTTGAATCTTTAACTACCAGAGAAGTCAAAAAGGCCTTTTATTATTTGCTGGAAGAAAATGAAGAACACCTCTTCAAAGAACTGGGTGGTGTCAGCAGGAAACGCAAGCTTTCTGATCCTGAATGCTCAGTGCCATGTAAAAGACTTAATACTGGGATTAATCAACAAGACAACCATAACATTGCTGGAAATTCTGCAGCATTACCAGCAAACATAAACACTGTAAACAGAATATCAATTGAACAAAGATCTCTTCACAACATGAGCCATATtaacatcataaataaaacagaaagaaaacccCATGTAccaaagaaagagaagaaaaccaTCACATCCAAGAAGGAGAAAAAGCCTCTCGCaataaagaaagagaagaaaactcCTGCACCCAAGAAGGAGAAAAGGCCTCCTGCaataaagaaagagaagaaaactcCTGCAcccaagaagaaaaaaaccacTGCACCCAAGAAGAAGAGTCCCGCACACAAGATTAAGAAAACCCCTGCacccaagaagaagaagaccCCTGCacccaagaagaagaagactcCCGTACACAAGATTAAGAAAACCCCCGCACCCAAGAAGAAAACCCCTGCacccaagaagaagaagaccCCGACACCCAAGAAGAAGACCaatgtttgagttcatttaaaaattagaaCAGGTCCATCTCAGTATGTGTTGCATCCCTTGCTATGGTTGTGctgttactattttttttttttataaagaaatttgttaagaatatgaatataaaccACCCCCATAAATATCCATTAGCCCCCTCACACAacagtttagtttattttgttagGCCTGGATGGGGACAGTGTGGACTTATTTTGGCATGCTCCCAATAACCATTACATATGATCCATTTTCCTGTAgagcagaacctgattttgatGAGTTCTGCGTCTTCATTGTGATTAGTCAATCAgatttttgtgaagtttaggcttctatctgtcatttcctctgattttagatATTAGTTCAGGTGTAGGTAAGCTatggtttaggtgtagagatctGGTCAATTACGTactatttttttggaaatgttcttccagggtcaacaaaatatgtcaGAACTTGCTAATAGGTGACTAAACTCATggttattaaaagaaatattgacTGTTACTTTTACTTCAAACAGGGCTGCcagattttgagttttttctctctctctttaaactGAACAAACCACATATACTTGTGGATCAAGCAGAAGGAGGGCAACTCCTACCCTTATGTCAAGGGGACACTCATTTTACAGAGGACTATTCAGAACTGGTTCCCTGGATTGAGGGCATATTAAAGATGTGCTTCTTAAGCAGGCTAGATACTCACCTCCTCCAATCAGAACCCAAAGAAAATTCCAGTTGCTCAATACACTGGATATTCATTGTGTCTGAGCGGGTCCTCCCTAACAGAGGAGTAGGTTCAGGAGGATGCCTACTTGACTCTTCTGTGCTCATTCCTGAGTTAATGTCAGTTGCCTTGAAGCCCAAGCCGGAACTGGCATTGGAGGAATTACTGATTGACCTGTTTGCCAAAGAACCAAAAAAGTAGCAAATAACCAACGTAGTTGTGTTCGGGTTGTCCAATAGGAAAGTGTGTTCAATGTAGGTATGCTAACGCAAGCCAATGACTGTTGAGCTTAATGTTGCGTTGTGGCGTGAGTCACGTAATAAGGAAGAACTTATCGCAcatggtgtgagtgtgtgtttccgCAATCTGTCGTCGGGAAAAGTTCATAATTAGTTCGGAGAACGGTTCATAATTCACTCATGCCGCGTGTGACACTGGCCTAGCGGCCATATAAACGGTTAAACTCTGGAAGTCTCTTCGTGAATCGACCGAACTTCTTGGTGCGTGAGGGACTGAGGCGACTTGTGTGCTTCGTCGCGGGGAGTGGATCAGTTGTTCATCGTGTTTTCCCGACGTATCGTGACAGGACGTGGAGTGCTTAAGGAACATAGGATTGTTTCACAAATTCTCATCGGAAGAACGTAAGTGCCTTGTTCCCGTAAAGGAATCGCTTGTTTTAAGTGCACCAACGAACTGGGCCCCAACGTGTACGATCGATCAAACATTTCACTATTTGACTGTTTTGCATATGGTTTGagttaatttgcatatttgtaacacaataaatctttgttattcttttttcttta

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_043259049.1 True 2508 mRNA 0.41 5 21815200 21819162

Neighbor


gene id symbol gene type direction distance location
wdr47a wdr47,wdr47a,LOC107749106,LOC107730459,LOC108428282 coding upstream 5868 21794688 ~ 21809332 (+)
camsap2b camsap2b,LOC107749095,LOC107730450,LOC107692873,LOC107660032 coding upstream 21610 21754405 ~ 21793590 (+)
LOC122355713 LOC107578657,LOC107730436,LOC107692891,LOC107692896 coding upstream 110306 21702091 ~ 21704894 (+)
LOC122328123 LOC107730432,LOC107749146,LOC107600057,LOC107660295,LOC100536708 coding upstream 127629 21682031 ~ 21687571 (+)
chrng chrng,LOC107600056,LOC107749123,LOC107660019,LOC107692884,LOC107557864 coding upstream 133312 21676444 ~ 21681888 (+)
fndc7rs1 NA coding downstream 77514 21896676 ~ 21911669 (+)
trnam-cau_1 NA coding downstream 109585 21928747 ~ 21928819 (+)
gpc5c gpc5c,LOC107749179,LOC107660087,LOC107671592,LOC107730460 coding downstream 110135 21929297 ~ 22026087 (+)
gpc1b gpc1b,LOC107660106,LOC107749182,LOC107730456,LOC107549820,LOC107600088,LOC107671591 coding downstream 225706 22044868 ~ 22105101 (+)
LOC122324242 ephb1,LOC107549839,LOC107671589,LOC108430182,LOC106599529,LOC103359190 coding downstream 315192 22134354 ~ 22326172 (+)
LOC122359002 NA non-coding upstream 2297 21810929 ~ 21812903 (+)
G14316 NA non-coding upstream 94625 21719918 ~ 21720575 (+)
G14315 NA non-coding upstream 97208 21716771 ~ 21717992 (+)
G14285 NA non-coding upstream 257802 21556844 ~ 21557398 (+)
G14212 LOC107557873,LOC107721701 non-coding upstream 444701 21365808 ~ 21370499 (+)
G14476 NA non-coding downstream 75446 21894608 ~ 21895131 (+)
G14477 NA non-coding downstream 76009 21895171 ~ 21895478 (+)
G14484 LOC107568745 non-coding downstream 94358 21913520 ~ 21915028 (+)
G14532 NA non-coding downstream 648698 22467860 ~ 22472603 (+)
G14535 NA non-coding downstream 656619 22475781 ~ 22476202 (+)
ccl20a.3 LOC107749165,LOC107660500,LOC107557866 other upstream 98910 21714683 ~ 21716290 (+)
ece2a ece2a,LOC107660439,LOC107600061,LOC107557862 other upstream 194103 21533245 ~ 21621097 (+)
LOC122354659 LOC107749134,LOC107659944,LOC107600069,LOC107692888,LOC107557869,LOC107721709,LOC101885494 other upstream 332558 21481134 ~ 21482642 (+)
G14211 NA other upstream 453492 21307407 ~ 21361708 (+)
G13998 LOC107659744,LOC107749160,LOC107563810,LOC107563823 other upstream 650378 21163942 ~ 21164822 (+)
LOC122327294 aknad1,LOC107749213,LOC107660326,LOC107730428,LOC107671582 other downstream 24413 21843575 ~ 21853007 (+)
fndc7a fndc7a,LOC107660526,LOC107671595,LOC107730461,LOC107568736 other downstream 38050 21857212 ~ 21867399 (+)
G14471 NA other downstream 41729 21860891 ~ 21861442 (+)
LOC122327302 LOC107705949,LOC107599389,LOC107675701,LOC107737183,LOC107661566,LOC107586444,LOC107679834,LOC107719545,LOC107717972 other downstream 642754 22461916 ~ 22485655 (+)
LOC122327931 NA other downstream 814367 22633529 ~ 22674275 (+)

Expression



Co-expression Network