slc22a13a (LOC107722499)


Basic Information

Item Value
gene id slc22a13a
gene name LOC107722499
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10703246 ~ 10706943 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259432.1
tgttgatCCATTATGCTTTCCCCGCAATAACATGACCATTGTTCTCTgtatatatgactttctgtgaCATATTCACATGATTATGCAGTTAAACAttaatttgctttgttttctacTATAACTTATCCAGCTTTCTTGGGTTGTTTCTCTTCTGGTCTGACATGGCTGATTTTGGGGAGATTTTAGAAACTATAGGCGACTTTGGGCTTTTCCAAAAACTTCTCTTGTTTGCTTTGTGCTTTCCAAATCTCATTCTGCCTTTTCAGTTATCCAGCCTCGTCTTCAACCACGCAGACACAAACCACCATTGCAACACTGACTGGATCCTTCAGGTGGGTCCCAATCTGACAAAGGAAGAGCAGTTGAACCTGACTCTGCCCAGGCTCCCGGATGGCTCTTTCAGTCCTTGTAAGATGTATGTTCCCATCTACTGGGATCTGTCTGCTATCCAGGAATATGGCCTAAATGAAACCACCACTTGCACTGATGGATGGGTGCATAATGATACTATTTATGAAGCAACCATTGTCACCGATTTTGATCTTGTATGTGACAATGCTAATTTATTTCGGGGAGCACAGACAATATTCCTCGCTGGAATACTAGTTGGAGCTGTACTTTTTGGGCCTTTTTCAGAATCGTTTGGTCGCAAGCGAGCTACACAGATACCTATGGTGCTCTTCCTAATTTTCACCGTCGTGACTGGTCTCTCTCCAAACTTTTACGTGTACCTCACATCACAGTTCATTGTTGGTGTTGCTCTTGGAGGATTTCGGATCAACAGCATTATCCTTGCCACAGAGTGGATTGGAGTCGCTCAGAGATCCTATGCAGCCTGTCTGAGTCAAGTCCTGGCTGCTTTGGGACAGGTCATGTTTCTTGCTGTGGTTTATTATGTCAGAGACTGGAGACTGGACCAGTTTATAATGGCTGGCCCGCTTGCATTTGTGGTCATCTACATATGGTTTATTCCAGAGTCTGCCAGATGGCTTCTTATTCGCGGAAGGACTGCAGCTGCGAAGGAACTTATTCAGAAGGCAGCGGCGATCAACAAACGTACAGTTCCAGACTCATTAGCAGAGAAGgTCCTAAATGAAAAGCCTGTTGAAAGAGGGGGTATAAAAATCCTCTTTGCTTCCCGTGTGCTCAGGAAATATTTCTTAACCATTGCTTTCGCATGGTTCGCACTAAATCTAGCATACTACAGCCTCTCTCTGAATGTGGGGAAGTTCGGTCTGGATATTTTTCTCAATCAACTCATATTTGGCCTCTCTGAGATTCCGGTCCACTTCCTCTGCATGTGGTCTTTAGAAACGGCTGGAAGGAAGGTGTCTCTGATGTGTGCCCTCATAGTAGGaggctctctctgtctcctgaCACTTGCAGTTCCACAAAGTAATTACATTGCGGTTGCTGCTCTTGCCACTTGCGGAAGATTTCTCATGAACGGAGCAGGCAGTATTTGCAACGTTTATATTCAAGAACTCTTCCCCACCTCCGTTCGTCAGACAGCCATGGGTCTGGGCTCCACTGCAGCACGAGTCGGAAGTATGTTGGCTCCTGTGGTGAACATGCTGGAGATCTACCACTTCACAATTCCCACTCTGGTGTTAGGCAGCCTGGCACTAGTGAGTGGGATAATGGCTTTCCTGCTTCCTGAGACCAGACGCACTGAGCTGCCTGGTTCAACAGAGGAGGCAGAGGGCAAGAGGCAACCCAAAATGGCTTACTCTGCACCTGGAGATTGTGAAGACATCAAAGCAACTAAATTATAGCCTTATCTTTGTGGctttattattctgtttaaTGATTTACATTGTAGTGAAATGTATAATTTCTGCAGTTTAGCAAAAAGATTTATAGATCTATATGTAAAGTAATATGCAGTAAACCACAtttgaattattgttttatttttttggataaaCATGGTCATTACATTGGTTCATGATCaacattaacatgaaaataattgacttttcttgcatatatttttgtgtattatatgAAGACTGTATGGATTATTGAAATAAGCTAtgctaaataaatcagtttattcTTCCCCTA
>XM_043259441.1
tgttgatCCATTATGCTTTCCCCGCAATAACATGACCATTGTTCTCTgtatatatgactttctgtgaCATATTCACATGATTATGCAGTTAAACAttaatttgctttgttttctacTATAACTTATCCAGCTTTCTTGGGTTGTTTCTCTTCTGGTCTGACATGGCTGATTTTGGGGAGATTTTAGAAACTATAGGCGACTTTGGGCTTTTCCAAAAACTTCTCTTGTTTGCTTTGTGCTTTCCAAATCTCATTCTGCCTTTTCAGTTATCCAGCCTCGTCTTCAACCACGCAGACACAAACCACCATTGCAACACTGACTGGATCCTTCAGGTGGGTCCCAATCTGACAAAGGAAGAGCAGTTGAACCTGACTCTGCCCAGGCTCCCGGATGGCTCTTTCAGTCCTTGTAAGATGTATGTTCCCATCTACTGGGATCTGTCTGCTATCCAGGAATATGGCCTAAATGAAACCACCACTTGCACTGATGGATGGGTGCATAATGATACTATTTATGAAGCAACCATTGTCACCGATTTTGATCTTGTATGTGACAATGCTAATTTATTTCGGGGAGCACAGACAATATTCCTCGCTGGAATACTAGTTGGAGCTGTACTTTTTGGGCCTTTTTCAGAATCGTTTGGTCGCAAGCGAGCTACACAGATACCTATGGTGCTCTTCCTAATTTTCACCGTCGTGACTGGTCTCTCTCCAAACTTTTACGTGTACCTCACATCACAGTTCATTGTTGGTGTTGCTCTTGGAGGATTTCGGATCAACAGCATTATCCTTGCCACAGAGTGGATTGGAGTCGCTCAGAGATCCTATGCAGCCTGTCTGAGTCAAGTCCTGGCTGCTTTGGGACAGGTCATGTTTCTTGCTGTGGTTTATTATGTCAGAGACTGGAGACTGGACCAGTTTATAATGGCTGGCCCGCTTGCATTTGTGGTCATCTACATATGGTTTATTCCAGAGTCTGCCAGATGGCTTCTTATTCGCGGAAGGACTGCAGCTGCGAAGGAACTTATTCAGAAGGCAGCGGCGATCAACAAACGTACAGTTCCAGACTCATTAGCAGAGAAGgTCCTAAATGAAAAGCCTGTTGAAAGAGGGGGTATAAAAATCCTCTTTGCTTCCCGTGTGCTCAGGAAATATTTCTTAACCATTGCTTTCGCATGGTTCGCACTAAATCTAGCATACTACAGCCTCTCTCTGAATGTGGGGAAGTTCGGTCTGGATATTTTTCTCAATCAACTCATATTTGGCCTCTCTGAGATTCCGGTCCACTTCCTCTGCATGTGGTCTTTAGAAACGGCTGGAAGGAAGGTGTCTCTGATGTGTGCCCTCATAGTAGGaggctctctctgtctcctgaCACTTGCAGTTCCACAAAGTAATTACATTGCGGTTGCTGCTCTTGCCACTTGCGGAAGATTTCTCATGAACGGAGCAGGCAGTATTTGCAACGTTTATATTCAAGAACTCTTCCCCACCTCCGTTCGACAGCCATGGGTCTGGGCTCCACTGCAGCACGAGTCGGAAGTATGTTGGCTCCTGTGGTGAACATGCTGGAGATCTACCACTTCACAATTCCCACTCTGGTGTTAGGCAGCCTGGCACTAGTGAGTGGGATAATGGCTTTCCTGCTTCCTGAGACCAGACGCACTGAGCTGCCTGGTTCAACAGAGGAGGCAGAGG

Function

NR:

description
solute carrier family 22 member 13-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259432.1 True 2067 mRNA 0.43 10 10703246 10706943
XM_043259441.1 False 1700 mRNA 0.46 9 10703246 10706219

Neighbor

gene id symbol gene type direction distance location
oxsr1a oxsr1a,LOC107718088,LOC107589819,LOC107722611,LOC107585310,LOC107689410,LOC107688448 coding upstream 461 10692510 ~ 10702785 (+)
rpp40 rpp40,LOC107688445,LOC107722637,LOC107689405 coding upstream 31434 10665905 ~ 10671812 (+)
nrn1b nrn1b,LOC107722529,LOC107688533,LOC107589820 coding upstream 42785 10658601 ~ 10660461 (+)
nebl nebl,LOC107722518,LOC107688530,LOC107718172,LOC107689428 coding upstream 86950 10611990 ~ 10616296 (+)
bmi1b bmi1b,LOC107585379,LOC107688441,LOC107689401 coding upstream 112786 10584873 ~ 10590460 (+)
csrnp1a LOC107722574,LOC107585280,LOC107689421,LOC107589814,LOC107718084,LOC107683225,LOC107688521 coding downstream 26973 10733916 ~ 10741971 (+)
gorasp1a LOC107688453,LOC107722575,LOC107585269,LOC107689416,LOC107589815,LOC107718085 coding downstream 35542 10742485 ~ 10748341 (+)
si:dkey-24c2.9 LOC107718082,LOC107689417,LOC107589878 coding downstream 41877 10748820 ~ 10752810 (+)
LOC122359360 ca8,LOC107693711,LOC107585586,LOC107691405,LOC107589840,LOC106599582 coding downstream 201340 10908283 ~ 10917738 (+)
LOC122361723 gyg1a,LOC107550614,LOC107709894,LOC107722604,LOC107688484,LOC107585020 coding downstream 430158 11137101 ~ 11138828 (+)
LOC122359526 NA non-coding upstream 134238 10567881 ~ 10569008 (+)
G10901 NA non-coding upstream 163256 10421937 ~ 10539990 (+)
G10914 afg3l2,LOC107718155,LOC107688430,LOC107589831 non-coding upstream 220294 10445181 ~ 10482952 (+)
G10918 inhbab,LOC107718177,LOC107589832 non-coding upstream 227963 10470121 ~ 10475283 (+)
G10903 NA non-coding upstream 310096 10392693 ~ 10393150 (+)
G11077 NA non-coding downstream 51113 10758056 ~ 10831642 (+)
LOC122359515 NA non-coding downstream 113168 10820111 ~ 10822197 (+)
G11106 NA non-coding downstream 189740 10896683 ~ 10897497 (+)
G11117 NA non-coding downstream 246107 10953050 ~ 10978280 (+)
G11133 NA non-coding downstream 449595 11156538 ~ 11157341 (+)
lyrm4 lyrm4,LOC107718092,LOC107688446,LOC107722638,LOC107689406,LOC107688520 other upstream 38136 10662729 ~ 10665110 (+)
selenof selenof,sep15,LOC107693704,LOC106598901 other upstream 541437 10158532 ~ 10161809 (+)
znf414 LOC107722538,LOC107564712,LOC107693731,LOC107691619,LOC107718126 other upstream 786385 9911628 ~ 9916861 (+)
arpc5a arpc5a,arpc5,LOC107722639,LOC107693740,LOC107564704,LOC107677751,LOC107718183 other upstream 952034 9746570 ~ 9751212 (+)
olfm3b olfm3b,LOC107700521,LOC107710604,LOC107745696,LOC107680049 other upstream 1531331 9162611 ~ 9171915 (+)
G10979 LOC107722568,LOC107585289,LOC107688450,LOC107718087,LOC107689412 other downstream 4187 10711130 ~ 10718194 (+)
LOC122359491 tesk2,si:dkeyp-75h12.2,LOC107585988,LOC107679327,LOC107602527,LOC107728975,LOC107714850,LOC107674209,LOC107562290,LOC107668671,LOC107588168,LOC107691921,LOC107753974 other downstream 412911 11119854 ~ 11135991 (+)
kcnh2a kcnh2a,LOC107718079,LOC107589806,LOC107722642,LOC107676096,LOC107586123 other downstream 522817 11229760 ~ 11264234 (+)
fitm1l LOC107589905,LOC107718171,LOC107585187,LOC107688462,LOC107722554 other downstream 596735 11303678 ~ 11338469 (+)
mrpl34 LOC107688463,LOC107585198,LOC107722555,LOC107680228 other downstream 632792 11339735 ~ 11341111 (+)

Expression


Co-expression Network