vipr1a (vipr1a,LOC107689398,LOC107718100,LOC107722634,LOC107589827,LOC107688439,LOC107585408)


Basic Information

Item Value
gene id vipr1a
gene name vipr1a,LOC107689398,LOC107718100,LOC107722634,LOC107589827,LOC107688439,LOC107585408
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10543107 ~ 10564473 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259577.1
GAAGGCAGGAGCTCTCCTATTTGTATTGGTGTGTTAGTTTACAATATTGTCTTACATGACATGCCACAGCATTACGTAAAGTTCCGTAACTACAGTAGATCATTTAAGAGCGGTTTAATGGGAAAAGAGTAGGCAAGCTAGAAGAAACCAGGAGCTGTGAGATAGGTGCATGGACGGACAATatccaaaaggaaaaaaaagcaggtTATGACAAAGAATGAGTCACTTATCGCTGTTATTCAGGGCTGTGCTTCTGCTACTAtagactacacacacacacacacacacacacacacacctacttTGGTTAGGACGTGGATAGACAGTCCACCTCGCGCGTGTCATGTCTGCATGGCTGTTGTAAACGGCTCCGCATCGTTCCGGAGTCGTTTATGAATGAAGTGTTTTTCACATAAGGCAGAAACATGGCCAGGTTCGGCGGGAAGGACTGCTGGTGAACCCGCGCGCACCGGAGCGCATAGTTGGCTGACGCTTCGGATTCTTCGTCAGTTACTTTTCGGCCATCAACTTGTCTCCGTGCGTCGCTGCTTTTGCATCCGCTGAATCGACTGAAATGGATACGTCTAAACGAATGCTGATTTTATACCTAACCTGCTCGTTGGGACCCATGCTGTCTATCCAGATGTGCGAGATCATGTGGGAGCTGGAAGCGGAGAAAAGGGAATGTTTGTCCAAGCTGGAAAACATCACGTCAGGTTGCACAGGTGAATGGGATTTAGCATGCTGGCCATCAGCTAGGATTGGGGAGTTGGTCACCATCCCCTGTCCAAATTACTTTAGCCATGTCAGTGATCAGAGAGGAAACATATCGAAGAGCTGTACTGCCGATGGCTGGACAGAAATAAACACAGCTGTCGTTGCTTTTAACTGTGGCTATGACCCCAATATCACAGAGGATGGAAACATGGGTGAATTCCTGGGCTCTGTGAGAACTGGGTACACTGTTGGTCACACTGTGTCTCTCATATCCCTCATCATTGCCATCGTCATTCTGTGCTTTTTCAGAAAACTCCACTGCACAAGGAACTACATCCACATTCACCTGTTCATGTCCTTTATACTGAAGGCTGTGGCTGTAATTATGAAAGATGTAGTCCTGTATGAGGTGGAGGAACCTGATGACTGCCACTATGAATCTGTGGGCTGCAAGGCTGCCATGGTTTTCTTCCAGTACGGCGTGATGGCCAGTTTCTTCTGGCTACTAGTGGAGGGTCTGTATCTGCATGCTCTTCTGGCCGTATCCTTCTTCTCTGAGAGGAAGTACTTCTGGTGGTACATTCTCATTGGCTGGGGAGTTCCAGGTGTCTTCATAACAATCTGGAGCATCACAAAAGCTTATTTACATGATATTGGATGTTGGGATATTATCGACGATGATCTGTGGTGGATTATTAAAACCCCTATATTGGTAACAATACTGATGAACTTCATTCTCTTCATTTGTATCATCCGGATACTTCGGCAGAAAATCAGTTGCCGGGATATCGGGAGAAACGAGTCACACCAGTACTCGAGACTGGCAAAATCGACTTTACTTTTGATTCCCCTGTTCGGGATAAACTACATAATCTTTGCCTTCATGCCTCATCACATCAAGTCTTATGTGCGTTTGGTGTTTGACTTGATCCTGGGGTCTTTTCAGgGATTCTGTGTCGCTGTCCTGTACTGTTTTCTAAACGGAGAGGTCCAGTCTGAGATCAAACGAAAGTTTAGGCGGTGGCACATGCAGAGATTTCTGGGAGCAGACACCAAATACCAGCAGCCCTCCATGGCAAGCAACGGCCTGAACTTTAGCTCCCAAATCACCATGATGACAAAAAGCAGCCCCTCCACGCGCCGCGCTTCCGCCTGTCAAGATGACTTCTCTGCCGTCTGAGCGCTGAGTGATGCTCCGTCTGAGACGAGACGCAGAAACCAGTCTGGGCTCTACGCACACAGAAAGGGTTCCCCCCCCGGACCACCTCCATCATCTGCAGGTTGCTCGTTCCAGTAGGAACGTGAGGGAAACCGTGCAGCTCGTGAATCATAGGATGTATAACACACATCAATCGGGAGAGAAATACTGTATGCAAGTAAAATGGACTCTGATTGTGTTTCACCACACTACCGACTCAAGCTGGCTTCATAAGGACGCAATATTGTTGCTGAGAAGACTCGTCGGATTGATGGTCCACATCCATTGATGCGTTTTTTTGTACACAACAACGCAGACATTAATCTTCAGCGTTAGAGTTGGTATCTGttagcttttgcttttttttccccatgccCTCATTATGCTGCTCAAGATTTCTCAGTCTCTTAATAATCTGTAAAGCTGAACGGTGACCTTTCGGGTCTCTAGTGaccaggttttatttttatcttcttccTTATTCCAGGAAAAAACGTGATGTGATTTAGACAGTCTGACATTCTGGTTTTGCATCCGTGTCATGTGCCTGCGTGTCTGTGGACATGTGGACAAACACAAGCGACTCTCATGGAGAGCcataaaagcatgtttactTGTGCGGCAGAAATAGTGCGTCAtgctttatgttttataatagtGATTTATGGTGTAATTGTATAGTTGCGCGTGAAAATGTACGTGGGTTGTGTAACTGTGCACTTGTCTCGCAAAAACAATCgcaaaagatgcatttttagGGGAGGATTTTTAGTGTGAAGTCTTTTTAGCTGTCATAAGTACATGTGGTGTTAGTCGTAGTTGCTGGCATGAAAACAGTTGCATGCACGGTTCTTGTACCTCGTTGTGAATAAGACGAACGTTTACGAGAAAGAGTTTTGTCGCTGTTTTTGGAAAGTGTATTGTGGATGTTGTCGTCGAAAGTATACGGATCAATTTATTACATTAGATCTTAGTACGCCttttatctttatataaaaatatttatatgctgtttAGAGAAAATTCGagatttttctattaaattatgcattatttttattttaacaaatgatcTCTATCACCAGCGtgcaatttaatttgttttctctattgtgttttattttacttttttgatttCATCTAAgtttatccatccatccctccatccatccggCATGCATTCGTAAGCACACGTCTACTAATTCTGGCATTAATTCAATCACAATAGCAACTGCTTTGTTTTCATATATTGTGGATTTCGGATTTCATAAAACAGAGACATCGCTATTAGGACGACAATCACATCTTGAGCAAGGATGATAAAGCGAGAGAAACCAGAGCCAGTGGAAGGTGAAGGAGATCTCACTTTGTTTACCTCCCATCTAAAACAcatctgtcatttatttatctaccAAATCCCTTGTTAAACTATTCTCGTAACTCTCCC

Function

symbol description
vipr1a Predicted to enable G protein-coupled peptide receptor activity; peptide hormone binding activity; and vasoactive intestinal polypeptide receptor activity. Predicted to be involved in adenylate cyclase-modulating G protein-coupled receptor signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Human ortholog(s) of this gene implicated in achalasia. Orthologous to human VIPR1 (vasoactive intestinal peptide receptor 1).

NR:

description
vasoactive intestinal polypeptide receptor isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259577.1 True 3362 mRNA 0.44 13 10543107 10564473

Neighbor

gene id symbol gene type direction distance location
zbtb47a LOC107722502,LOC107688435,LOC107718174,LOC107689427,LOC107589829,LOC107586677 coding downstream 1732 10535136 ~ 10541375 (-)
ctdsplb ctdsplb,LOC107722544,LOC107688434,LOC107585460,LOC107589830,LOC107689397,LOC108435491,LOC108280637 coding downstream 22140 10507323 ~ 10520967 (-)
afg3l2 afg3l2,LOC107589831,LOC107689395,LOC107688430,LOC107585478,LOC108435493 coding downstream 53827 10481670 ~ 10489280 (-)
inhbab inhbab,LOC107718177,LOC107589832 coding downstream 66878 10465309 ~ 10476229 (-)
LOC122359424 mplkip,LOC107722562,LOC107585495,LOC107688429,LOC107718104,LOC107689394,LOC107589834 coding downstream 109986 10429794 ~ 10433121 (-)
si:dkey-29d8.3 si:dkey-29d8.3,LOC107586663,LOC107689400 coding upstream 6339 10570812 ~ 10573903 (-)
dnajc1 dnajc1,LOC107718098,LOC107585399,LOC107722591,LOC107688438 coding upstream 10779 10575252 ~ 10580622 (-)
pip4k2ab pip4k2ab,LOC107585365,LOC107688442,LOC107718096,LOC107689402,LOC107722628,LOC103035282,LOC108444221 coding upstream 27739 10592212 ~ 10610735 (-)
riok1 riok1,LOC107689403,LOC107589821,LOC102776549,LOC107688531 coding upstream 51828 10616301 ~ 10624744 (-)
rreb1b rreb1,LOC107722578,LOC107718094,LOC107689404,LOC107589881 coding upstream 60599 10625072 ~ 10655849 (-)
G10987 NA non-coding downstream 316251 10226218 ~ 10226856 (-)
G10869 selenof,sep15,LOC107693704,LOC107586130 non-coding downstream 383043 10158578 ~ 10160064 (-)
G10812 NA non-coding downstream 495734 10046818 ~ 10047373 (-)
G10773 NA non-coding downstream 615270 9926105 ~ 9927837 (-)
G10708 NA non-coding downstream 794367 9748387 ~ 9748740 (-)
G11057 NA non-coding upstream 102004 10666477 ~ 10666712 (-)
G11064 rpp40,LOC107722637,LOC107688445,LOC107689405 non-coding upstream 103169 10667642 ~ 10668967 (-)
G11063 rpp40,LOC107688445,LOC107722637,LOC107689405 non-coding upstream 104589 10669062 ~ 10669414 (-)
G11097 NA non-coding upstream 181562 10746035 ~ 10817620 (-)
G11096 LOC107688453,LOC107585269,LOC107722575 non-coding upstream 182068 10746541 ~ 10819202 (-)
fbxl7 fbxl7,LOC107718179,LOC107689422,LOC107688519,LOC107589836,LOC107722558,LOC107585539 other downstream 121632 10392682 ~ 10421475 (-)
G11011 chd7,LOC107585562,LOC107722533,LOC107688517,LOC107718105,LOC107589837,LOC107689390 other downstream 164896 10376063 ~ 10378211 (-)
ca8 ca8,LOC107693711,LOC107585586,LOC107691405,LOC107589840,LOC107722503,LOC102778484 other downstream 222704 10314033 ~ 10320403 (-)
lmo4 LOC107722609,LOC107693715,LOC107691760,LOC107589910 other downstream 399398 10140935 ~ 10143709 (-)
pkn2a pkn2,LOC107693716,LOC107585639,LOC107722607,LOC107718113,LOC107691687 other downstream 403522 10119973 ~ 10139585 (-)
G11102 tgfbr1a,LOC107585257,LOC107722631,LOC107688454,LOC107689415,LOC107718081 other upstream 193555 10758028 ~ 10764891 (-)
LOC122359216 tgfbr1a,LOC107688454,LOC107585257,LOC107722631,LOC107589809,LOC107718081,LOC107689415 other upstream 203501 10767974 ~ 10861595 (-)
G11105 LOC107688455,LOC107585244,LOC107722600 other upstream 236243 10800716 ~ 10803288 (-)
LOC122359462 NA other upstream 333076 10897549 ~ 10902625 (-)
trnau1apb LOC107688461,LOC107585172,LOC107722553,LOC107680226,LOC107589802,LOC107718075,LOC102202587 other upstream 771245 11335718 ~ 11339611 (-)

Expression


Co-expression Network