inhbab (inhbab,LOC107718177,LOC107589832)


Basic Information

Item Value
gene id inhbab
gene name inhbab,LOC107718177,LOC107589832
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10465309 ~ 10476229 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259604.1
AATTCCTGTTCATAGGTGCCAAGGAATGAAAGGTAAGATGTGCTCCAgctcacacagacacatgtaTGGACCAGCATGCATCTGTCTGACACACGCGTCTCGTGGCCGACTAGCAGCCCTCATTGGTCTCTGGGGGTGCAAGGTCTAAACTCCACAAAACATCTGGAGAAACGCTGCAGTGTGTCTGTTCTGCAGTCATGAACATTCCTGCTTTCGGCTGAATCACCTTCAGGGCTTTTATTTCTCTTAATGGTTCTATTTTGTAAATCCGCCTAATTTGCTGTCCGTGGGATAATTGCctgaaatcattttcaaaagcGAGAATGTACGTATTATAACCACAAGAGGGAGTCGAGTGATGTCACTGCCATGCATCACTATGATGCGAATGTCACAgacatgaaatacaaaaaaatgatatttaatgaaAAGGTGAATAGGTTTATTTAAATTGCCAGAATTGTCCAGATATGTACATTTAAGCAGATGCATCCCTCTTATAAATGAGTGATATTTGAATATAACagttttgcctcttttttttttaacactcaTTTGATCCAAAGGAAGCGCCTCACTTCCCACCCATGCCTTTTCTACAAAAATCGTGTCTGTACGCTGCATGTGCACCTAACCGAGCATGAATGAGTGACTGGTTGTGTTTACACGTGTGTTACGCACACAGATAGCCATGATAATCATGTTGACCCCTCGACTTTTCCCTCCCCAGGAGATTATTCCACCACACAGTTAGCCAGCCTGCACAACAGGTGCCGACGGATTGATGGCTGGAGAGATGAATGAtcgctggaaaaaaaaatgagagtgagagagagagagagagagagagtgtgtgcgtaAGAGCAACTTAGATTCTCACGAGGAAAAAAATGGTACACGTTACTGGAGGAGTCACtgaagagagcgagagagagagagagagagagagagagagagggagggagggagatgAAAAAGTCAGTGAGTCAGTAGTGAGAAAGATTGTAATAAAGTGAGAGGGAGggatgaagaggaggaaggTATaattacagagagagaaagagagaggggacaAACAGTGAGAAgccagagagggagagagtgctAAAGAAAGAGTCAGAGAACTGTCTAACCCTGCCcactttccactcaaccattcAACTCCGGCACGGGCAGCCGTGCACCGTCAGGTTTCTACAGAGCGACCCGGAGGAGGAGCTCACCGGCGGCGCTTCGTTCAGCCCTCTTCAACTTTTATCACCATGACCGCTCCGCTCAGATAAGGATTATTTTGGACCGGCTCCCGCTTTCCGCATCGATCTGACAAGCAAGCCAGCGCGGCGACTGTGATCTTGGCAGCGGAGCAGAACAGGACCGAGGTGTGAGTCTGCCGTCACTCAGGATGTCCTCGCTCACTCTCGTGACTGGGGTGCTGCTGCTCTCCGGCTGTTTGTCAGGGGGCTGCTCGCCCACGCCGGCCGAGAGCGGCTCTCAAGATCCCGTGACCCCCTGCCCGTCCTGCGCTCTAGCCCAGAGGCAGAAGGACTCGGAAGAGCAGACCGACATGGTGGAGGCGGTCAAGAGGCACATCCTCAACATGCTGCATCTGAACGCCCGGCCCAACGTCACTCACCCCGTGCCCCGCGCCGCCCTGCTCAACGCCATCCGCAAGCTGCACGTGGGACGGGTGGGTGAGGACGGCACGGTGGAGATGGAGGAAGATGGAGGGGGGCTGGGGGAACACCGAGAGCAACCTGAGGAGCAGCCCTTCGAGATCATCACCTTCGCTGAGCCAGGAGATGCCCCTGACATCATGAAATTTGACATTTCTAAGGAGGGCAGCGCTCTGTCCATGGTGGAGCAGGCCAACGTCTGGCTTTTCCTAAAAGTCGCCAAGGGCAGCCGAGGGAAAGGCAAGGTGTCTGTTCAGCTCCTGCAGCCCAATGCGGACGGATCCCAAGAAGCGGTGGTGTCCGAGAAGACGGTGGATACGCGGCGCAGCGGCTGGCACACGCTCCCGGTGTCCCGCACAGTGCAGACCCTGCTGGACGGGGACGACAGACTGCTATGTCTCCGCGTCTCCTGTCCCATGTGTGTCGAAGCTGGCGCCGTGCCCATCCTGGTGCCCTCCGACGGCATCAAGGGCAAAGAGAGGGAACAATCTCACCGTCCCTTCCTCATGGTGGTGCTGAAGCCAGCCGAGGAACACCAGCACCGGCGCAGCAAGCGCGGCCTGGAGTGCGACGGCAAAATTCGCGTCTGCTGTAAACGGCAGTTCTACGTCAATTTTAAGGACATCGGGTGGAGCGACTGGATCATCGCTCCGTCTGGGTATCACGCTAACTACTGCGAGGGCGACTGCCCCAGCCATGTGGCCAGCATCACGGGCTCGGCCCTCTCCTTCCATTCCACCGTCATCAATCACTACCGGATGCGCGGGTACAGCCCCTTTAACAACATCAAGTCGTGCTGCGTACCCACGCGCCTACGGGCCATGTCCATGCTCTACTACAACGAGGAGCAGAAGATCATTAAGAAAGACATCCAGAACATGATAGTGGAGGAGTGTGGCTGCTCATAAGACGCCGTGAACTCCTAACAAACACTTTAATGTTGGTACAAAGCACATATCAGAGGATTGGCACACAGACTTTCGAACTGCAAACTCGGGCAAACCTATTTGTTTCTAGATCATTCCAATAGGACTGGTTATTGGAGCGGTCTTTGTGGCACTTTCGTATAAAAATGACGGAGGGGAATaaagcataatatattttttttaatgaagggAGACTGAGACTGAGAGGGAACGGGTGCATGGGTCAAAGTGTCAGCCCTGATTCTCTGCACTGCAATAAAGAGACTTATTTTGAAGTGTGGAATTATATATTctgagaggaagaagaagaaaaaaaaaacatgcaactcTATGCAAGACAAGTATTATTACTGgatgttctttttattattattattattattattatttgtcttcTAGCTTTACGTTTAATGTCGTTTTTATTGTCATCCCttttcacagacaaaaaaactgtactttttAGTACATCTTAAAAGAAGTAGTTGTGTTTAGTTAATTTTTCTTATGAGAAATACTTGAAGATTAAAATTAGTTTGACCAGCTGCTGGAGCCAaactacattattattgttattatgattattttattattgttattattattattattatattgctatAATcacctattattatttttctcctAAACATTCTGAATGTTGatgaaaagtaatataaatTTGCACTAAGCCAACATTCGTACCATGTGAAGCCCAGAGCATTATGGGTCGCATTCTAGTTGCCATATCAGAGTCTAGAACAAAATGCATTCGGATCTTACACATAGTAAACCAAAGACCATACACATCCCATTCTCAGAGCAAATCCCCAAAATGCCCGGCTCTGTGAATCTATTCAAATTAGGAACAACTGTGTATGGCCAACATAATATACCATTAACTTAATATAGcacataaaataactttaatttctgtttgtttgttattttcctGAAGCAGCCTCAATGTTAAGATACCTTTCGCTCTCTGTGTTTCGACAGTGTTTTGTCTTTACCAATGTATAACAAAGGTCTTAGATTCTGAACTGAAACCTAGCCTTCTCGACAGAAATATTCAGTAAAGAAATAGAAACGATGTCCTGGCAGCGGCAATCTGCTTGGTCAGGTTTAAAGTACAAGACACTAAAGGAACTTACTGTGTTGTTTTATGTAGAGTTATGCAACATATGATTGTATGTTGCCATGTTGTACAAATCAAAATATGTGCTTGTCATGTTTTATATCTAATTTATTTTGCAGCATAATCTTTGCTTCACTATTAAAGCTGAATTGTACAACTTCA

Function

symbol description
inhbab Predicted to enable cytokine activity. Predicted to be involved in SMAD protein signal transduction and positive regulation of pathway-restricted SMAD protein phosphorylation. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in ovarian follicle. Orthologous to human INHBA (inhibin subunit beta A).

NR:

description
inhibin beta A chain

GO:

id name namespace
GO:0040007 growth biological_process
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function
GO:0008083 growth factor activity molecular_function

KEGG:

id description
K04667 INHBA; inhibin beta A chain

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259604.1 True 3899 mRNA 0.47 2 10465309 10476229

Neighbor

gene id symbol gene type direction distance location
LOC122359424 mplkip,LOC107722562,LOC107585495,LOC107688429,LOC107718104,LOC107689394,LOC107589834 coding downstream 32188 10429794 ~ 10433121 (-)
trnak-cuu_1 NA coding downstream 75686 10389551 ~ 10389623 (-)
hs2st1a hs2st1a,hs2st1,LOC107718112,LOC107589844,LOC107691454,LOC107722647,LOC107585633,LOC106598897 coding downstream 307288 10146582 ~ 10158021 (-)
lrrc8da lrrc8d,lrrc8da,LOC107722644,LOC107585666,LOC107718115,LOC107691468,LOC107589846,LOC107722505 coding downstream 351724 10108131 ~ 10113585 (-)
sept2 sept2,LOC107722571,LOC107693718 coding downstream 393846 10062763 ~ 10071463 (-)
afg3l2 afg3l2,LOC107589831,LOC107689395,LOC107688430,LOC107585478,LOC108435493 coding upstream 5441 10481670 ~ 10489280 (-)
ctdsplb ctdsplb,LOC107722544,LOC107688434,LOC107585460,LOC107589830,LOC107689397,LOC108435491,LOC108280637 coding upstream 31094 10507323 ~ 10520967 (-)
zbtb47a LOC107722502,LOC107688435,LOC107718174,LOC107689427,LOC107589829,LOC107586677 coding upstream 58907 10535136 ~ 10541375 (-)
vipr1a vipr1a,LOC107689398,LOC107718100,LOC107722634,LOC107589827,LOC107688439,LOC107585408 coding upstream 66878 10543107 ~ 10564473 (-)
si:dkey-29d8.3 si:dkey-29d8.3,LOC107586663,LOC107689400 coding upstream 94583 10570812 ~ 10573903 (-)
G10987 NA non-coding downstream 238453 10226218 ~ 10226856 (-)
G10869 selenof,sep15,LOC107693704,LOC107586130 non-coding downstream 305245 10158578 ~ 10160064 (-)
G10812 NA non-coding downstream 417936 10046818 ~ 10047373 (-)
G10773 NA non-coding downstream 537472 9926105 ~ 9927837 (-)
G10708 NA non-coding downstream 716569 9748387 ~ 9748740 (-)
G11057 NA non-coding upstream 190248 10666477 ~ 10666712 (-)
G11064 rpp40,LOC107722637,LOC107688445,LOC107689405 non-coding upstream 191413 10667642 ~ 10668967 (-)
G11063 rpp40,LOC107688445,LOC107722637,LOC107689405 non-coding upstream 192833 10669062 ~ 10669414 (-)
G11097 NA non-coding upstream 269806 10746035 ~ 10817620 (-)
G11096 LOC107688453,LOC107585269,LOC107722575 non-coding upstream 270312 10746541 ~ 10819202 (-)
fbxl7 fbxl7,LOC107718179,LOC107689422,LOC107688519,LOC107589836,LOC107722558,LOC107585539 other downstream 43834 10392682 ~ 10421475 (-)
G11011 chd7,LOC107585562,LOC107722533,LOC107688517,LOC107718105,LOC107589837,LOC107689390 other downstream 87098 10376063 ~ 10378211 (-)
ca8 ca8,LOC107693711,LOC107585586,LOC107691405,LOC107589840,LOC107722503,LOC102778484 other downstream 144906 10314033 ~ 10320403 (-)
lmo4 LOC107722609,LOC107693715,LOC107691760,LOC107589910 other downstream 321600 10140935 ~ 10143709 (-)
pkn2a pkn2,LOC107693716,LOC107585639,LOC107722607,LOC107718113,LOC107691687 other downstream 325724 10119973 ~ 10139585 (-)
G11102 tgfbr1a,LOC107585257,LOC107722631,LOC107688454,LOC107689415,LOC107718081 other upstream 281799 10758028 ~ 10764891 (-)
LOC122359216 tgfbr1a,LOC107688454,LOC107585257,LOC107722631,LOC107589809,LOC107718081,LOC107689415 other upstream 291745 10767974 ~ 10861595 (-)
G11105 LOC107688455,LOC107585244,LOC107722600 other upstream 324487 10800716 ~ 10803288 (-)
LOC122359462 NA other upstream 421320 10897549 ~ 10902625 (-)
trnau1apb LOC107688461,LOC107585172,LOC107722553,LOC107680226,LOC107589802,LOC107718075,LOC102202587 other upstream 859489 11335718 ~ 11339611 (-)

Expression


Co-expression Network