ralab (ralab,rala,LOC107585502,LOC107718103)


Basic Information

Item Value
gene id ralab
gene name ralab,rala,LOC107585502,LOC107718103
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10425919 ~ 10446802 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259697.1
ACTAGACGCATCGTCGACAAGAAGACACTGGCATTACAGAAAGTtttgaaacaataataaaactgtttGTGGTTGAGAAGGCAAACTAATGGCGGAGACGTAACCTGTCGAGTTATGTGGCATTATTAAACAGCTTCAGGCCTTTGCGTATACTAGCGTTATTTTCTTTCTATCCACAAGTAAACTGGTAGTCTGTACAGACCAAGCCCAGCCGGCCGAAGCTGTCAGCAGTGCTGCTCCCTTCTGAGTCATGCATTGAAGCAAAACAAATCTGCTCGTAGCAGCAAAGCTAACAAGACGTCGAACACGCAAGTGCCCGTTCATTTGaataaagtcatacaggtttgggacgacatgaagTTCTTCCTTCTAGGTTTCCCCTAATACCCATCTACCTCAGATTTTTCACTACTTCTTCACTGCACCCATTCCTTGTTGCCTGAAGCCATGGCTGCTAGCAGGAATGCTTTGGCCCTTCACAAAGTGATAATGGTGGGCAGCGGTGGCGTGGGCAAGTCAGCACTAACACTGCAATTCATGTATGATGAGTTTGTGGAAGACTACGAGCCCACCAAAGCCGACAGCTACAGAAAAAAGGTGGTTCTGGACGGAGAGGAGGTCCAGATCGACATCCTTGACACAGCGGGACAGGAGGACTACGCTGCCATTCGGGACAACTACTTCCGCAGCGGAGAGGGATTTCTCTGCGTGTTCTCCATCACAGAATCCGAATCCTTTGCTGCTACTGCTGACTTCAGAGAACAGATCCTTCGGGTAAAAGAGGAGGAGAACGTACCTTTCCTGCTGGTGGGAAACAAGTCAGACTTGGAGGATCGACGGCAAGTCGGTGTGGAGGAGGCCAAGACCAGAGCAGATCAGTGGGCAGTCAGCTACGTCGAGACTTCTGCCAAAACCCGTGCCAATGTAGATAAGGTGTTTTTTGATCTCATGCGTGAAATCAGAGCCAGAAAAATGGAAGatggcaaagaaaaaaatggaaaaaagaagaggaaaagctTGGCAAAGAGAATTCGAGAAAGATGTTGCATTTTATAACGACTGGGTCGCAGTGTAACACTAACATCTTTTCTTTACCCTTCCActgcttccaaaaaaaaaatccagcagaTTTCATCACTCTCCATGCAAAAGTGCTGGAGATTATCTCCTTAAAACACATCTAGGCTACAGCCTGTGTCTGTTTCTTCTCGATGTTGTTTCTCAATGGGTATAAAAGGGCAGAACATCagatatacattaaaatgtcaaatggtATCAAAGGTCTGACATATCAGATGAAAACATTTCTTAGCTCAAGCACACCAGAACTGACtactaaagtcatttttaattctgtttatttaattgcatttagttGAATGTGAGCACACTGATTGCTAAACACTAACACTGTTGGAAAAACAATACTACATTTGCAAGTTCACTTGCATTTAAATGCCCTGTTCTGTTTTACTTCCCAAAGTAAAGCCttaatgttacaaatatactaaatatacaaaGATGTTGGGTTTCAAGCTGCATAAATGCTTTTTAGGTAATTTTCTGAAAGGAAAACTATAGCTGTTTACCTTCTCCTGACATAGGCAAAGCTAAATATATCACCCAGGCAAATGCTCAAGTTATTGAAAATAACTATTAAACACAGTCTGTGCAGTTTATTCTTAATTGGCTCTTTTAccaaaagaaattcatacactCTAAAAGTTTTAAAGCCTGTGCATTTCAAGTTGGCACTGTACTTTGTTTTAGAAAGCGCACAAAACCTGTGTCAAATATGATTTAACTTAACCCAATCTCTccttaaacacacatacattaaatatttgtcGTTAAAAGGGCTTTTTCACTCGTCTCTGTATGGCACCAGATTTGGAGGTTTGTTTTGTGCCGTCTAGGGGTCCCGAATTTTAGCGATTTAGAAACGAGAACATCGTCTAGCTTGAGTTGACTTTACTGTGAAAACAGGTTGGAATGTTTTATTACACAGACTGAATTGTGTACTTTATTATAACTTATATGCAACTGAATATTTCTTGCTACATTTATCCTGTGtcattatattttctattgtaaatggtagttttctgtattttagttCTAAGGGCAAGAGTATATTGTGAAATCATGCTCGCTCGTACTAAAACCAAGAAACTAAGGGCTGGACACAATCTACTTTTCAGACACCTGCAGATCTGGAGTAAACAAGAACTGTCACCTTATGAGGAATGGTTTTGAATAAGCACATCCATGTGTAGATAAATGTGAGGTTGACCGTTTATTCCCACATTACTGATTTCTTTCCTTTACAGCTAAAGCTACACGGCTTCTTTTAAAAGTTAACTCTGCGAATGTCCTCACCCAAAGTTTTATGTGTACTGACGCATATGTAAGTTTTTCTCTCCCTTTGTTTAGTCAATCATAGTGGGTTACTTTGTCTCAACAAGCTCTTGATTGGTCTGTTTATGCGGAAAACACTCCATGTGGCAATGATGCTGACGTATCAACAGCTGATGCCTCAAGAGACCCAtcattgcttaaaaaaaatgactgtctTTAAGcgcaaaaaaaacaagtttacaatacaagacattttaatataa
>XM_043259704.1
CTAGACGCATCGTCGACAAGAAGACACTGGCATTACAGAAAGTtttgaaacaataataaaactgtttGTGGTTGAGAAGGCAAACTAATGGCGGAGACGTAACCTGTCGAGTTATGTGGCATTATTAAACAGCTTCAGGCCTTTGCGTATACTAGCGTTATTTTCTTTCTATCCACAAGTAAACTGGTAGTCTGTACAGACCAAGCCCAGCCGGCCGAAGCTGTCAGCAGTGCTGCTCCCTTCTGAGTCATGCATTGAAGCAAAACAAATCTGCTCGTAGCAGCAAAGCTAACAAGACGTCGAACACGCAAGTGCCCGTTCATTTGTTCTTCCTTCTAGGTTTCCCCTAATACCCATCTACCTCAGATTTTTCACTACTTCTTCACTGCACCCATTCCTTGTTGCCTGAAGCCATGGCTGCTAGCAGGAATGCTTTGGCCCTTCACAAAGTGATAATGGTGGGCAGCGGTGGCGTGGGCAAGTCAGCACTAACACTGCAATTCATGTATGATGAGTTTGTGGAAGACTACGAGCCCACCAAAGCCGACAGCTACAGAAAAAAGGTGGTTCTGGACGGAGAGGAGGTCCAGATCGACATCCTTGACACAGCGGGACAGGAGGACTACGCTGCCATTCGGGACAACTACTTCCGCAGCGGAGAGGGATTTCTCTGCGTGTTCTCCATCACAGAATCCGAATCCTTTGCTGCTACTGCTGACTTCAGAGAACAGATCCTTCGGGTAAAAGAGGAGGAGAACGTACCTTTCCTGCTGGTGGGAAACAAGTCAGACTTGGAGGATCGACGGCAAGTCGGTGTGGAGGAGGCCAAGACCAGAGCAGATCAGTGGGCAGTCAGCTACGTCGAGACTTCTGCCAAAACCCGTGCCAATGTAGATAAGGTGTTTTTTGATCTCATGCGTGAAATCAGAGCCAGAAAAATGGAAGatggcaaagaaaaaaatggaaaaaagaagaggaaaagctTGGCAAAGAGAATTCGAGAAAGATGTTGCATTTTATAACGACTGGGTCGCAGTGTAACACTAACATCTTTTCTTTACCCTTCCActgcttccaaaaaaaaaatccagcagaTTTCATCACTCTCCATGCAAAAGTGCTGGAGATTATCTCCTTAAAACACATCTAGGCTACAGCCTGTGTCTGTTTCTTCTCGATGTTGTTTCTCAATGGGTATAAAAGGGCAGAACATCagatatacattaaaatgtcaaatggtATCAAAGGTCTGACATATCAGATGAAAACATTTCTTAGCTCAAGCACACCAGAACTGACtactaaagtcatttttaattctgtttatttaattgcatttagttGAATGTGAGCACACTGATTGCTAAACACTAACACTGTTGGAAAAACAATACTACATTTGCAAGTTCACTTGCATTTAAATGCCCTGTTCTGTTTTACTTCCCAAAGTAAAGCCttaatgttacaaatatactaaatatacaaaGATGTTGGGTTTCAAGCTGCATAAATGCTTTTTAGGTAATTTTCTGAAAGGAAAACTATAGCTGTTTACCTTCTCCTGACATAGGCAAAGCTAAATATATCACCCAGGCAAATGCTCAAGTTATTGAAAATAACTATTAAACACAGTCTGTGCAGTTTATTCTTAATTGGCTCTTTTAccaaaagaaattcatacactCTAAAAGTTTTAAAGCCTGTGCATTTCAAGTTGGCACTGTACTTTGTTTTAGAAAGCGCACAAAACCTGTGTCAAATATGATTTAACTTAACCCAATCTCTccttaaacacacatacattaaatatttgtcGTTAAAAGGGCTTTTTCACTCGTCTCTGTATGGCACCAGATTTGGAGGTTTGTTTTGTGCCGTCTAGGGGTCCCGAATTTTAGCGATTTAGAAACGAGAACATCGTCTAGCTTGAGTTGACTTTACTGTGAAAACAGGTTGGAATGTTTTATTACACAGACTGAATTGTGTACTTTATTATAACTTATATGCAACTGAATATTTCTTGCTACATTTATCCTGTGtcattatattttctattgtaaatggtagttttctgtattttagttCTAAGGGCAAGAGTATATTGTGAAATCATGCTCGCTCGTACTAAAACCAAGAAACTAAGGGCTGGACACAATCTACTTTTCAGACACCTGCAGATCTGGAGTAAACAAGAACTGTCACCTTATGAGGAATGGTTTTGAATAAGCACATCCATGTGTAGATAAATGTGAGGTTGACCGTTTATTCCCACATTACTGATTTCTTTCCTTTACAGCTAAAGCTACACGGCTTCTTTTAAAAGTTAACTCTGCGAATGTCCTCACCCAAAGTTTTATGTGTACTGACGCATATGTAAGTTTTTCTCTCCCTTTGTTTAGTCAATCATAGTGGGTTACTTTGTCTCAACAAGCTCTTGATTGGTCTGTTTATGCGGAAAACACTCCATGTGGCAATGATGCTGACGTATCAACAGCTGATGCCTCAAGAGACCCAtcattgcttaaaaaaaatgactgtctTTAAGcgcaaaaaaaacaagtttacaatacaagacattttaatataa
>XM_043259710.1
TTCCTGTCGGTGCTGTACAGTTATCCAGGAGACCTCTAGGCGGATTTTCTTGTGGTAATGACATCgcaaaacacaacattttagtTTGAGTCTCAGCTGTACACCCAGTACTAGACGCATCGTCGACAAGAAGACACTGGCATTACAGAAAGTtttgaaacaataataaaactgtttGTGGTTGAGAAGGCAAACTAATGGCGGAGACGTAACCTGTCGAGTTATGTGGCATTATTAAACAGCTTCAGGCCTTTGCGTATACTAGCGTTATTTTCTTTCTATCCACAAGTAAACTGGTAGTCTGTACAGACCAAGCCCAGCCGGCCGAAGCTGTCAGCAGTGCTGCTCCCTTCTGAGTCATGCATTGAAGCAAAACAAATCTGCTCGTAGCAGCAAAGCTAACAAGACGTCGAACACGCAAGTGCCCGTTCATTTGaataaagtcatacaggtttgggacgacatgaagTTCTTCCTTCTAGGTTTCCCCTAATACCCATCTACCTCAGATTTTTCACTACTTCTTCACTGCACCCATTCCTTGTTGCCTGAAGCCATGGCTGCTAGCAGGAATGCTTTGGCCCTTCACAAAGTGATAATGGTGGGCAGCGGTGGCGTGGGCAAGTCAGCACTAACACTGCAATTCATGTATGATGAGTTTGTGGAAGACTACGAGCCCACCAAAGCCGACAGCTACAGAAAAAAGGTGGTTCTGGACGGAGAGGAGGTCCAGATCGACATCCTTGACACAGCGGGACAGGAGGACTACGCTGCCATTCGGGACAACTACTTCCGCAGCGGAGAGGGATTTCTCTGCGTGTTCTCCATCACAGAATCCGAATCCTTTGCTGCTACTGCTGACTTCAGAGAACAGATCCTTCGGGTAAAAGAGGAGGAGAACGTACCTTTCCTGCTGGTGGGAAACAAGTCAGACTTGGAGGATCGACGGCAAGTCGGTGTGGAGGAGGCCAAGACCAGAGCAGATCAGTGGGCAGTCAGCTACGTCGAGACTTCTGCCAAAACCCGTGCCAATGTAGATAAGGCTTTATTCACAGAGCTTCAGGATTTAAGTGGAAGGATTCGTAGCCATGAGATTTGAACGGGTTCCTAGACTCCAGAGGGAGCAGCACGGATTAATATGCGCTTTCAGGGTGAAGACTCTTCGCCTTTCTCCTTGTCAGCTGTGGCCATCGCTGCTTTGcggtGTGGAGAGCAAAGTTGTGAAAAAGACTACGCAGAAGGAATCCCCTCTTACCTCACTTTATCTCTTTCCCACAGATGAACACTTATTGACACAGCTAAATGTGTGGGCAGCTCCGTTAGAGGATGTCTGCAGACGTGGGTGCTTGCGTACGTGTGTTTATACCGTTTTGCGTCCACAACGTCCCCGTTGGAGCGTGCACGAACGCGTCTGTGCGCATCTCACTTCTATCTGTGGCTAGATGTAACGGATGAAACATTCCTTGACCACACTATGTGGGCACCATCagcatcattatcatcatcccTGAGACATGGAATGGACGGCAGGGTGTAGGTACACACAGTGTGAGGGCCACTAATATGAGAATGACACCTCTCTGCCCACACATGGCCTGTTCCTCACCAATCAGAGTCACTCACAGAGGCATGCAGGGTGGGCGGCCGTATCACGCAGGCTAAGTAATGAAGGTGTTGATGGAGAACACCACCGTTTTCACACGTCACACCGGGCAGATTGGTCATatggtgaaaataaaatgacccGTGTCATCAGTACACATATACAGAAATAGATCACATGAAATGGTACCGTTTTAATTAATCAACATGCTCCCCGAAGGCTGCCTACCGGTGTCCACAAGGTCCATTTTTGTGATTAAGCCTGTATTTCTATAATGATTACACCCgctcccaaaacacacacacacgcacacacactgaacCACATGCCCAATTACCAGGTCTCTTATTAGCTTTAGATTAATGATCCCCTGAGGCTTCTCTTGTGTGAAAGAGCGCAGCCCCACCAACCCACACACTGCTCACACACATGGGCATTTTAATTGGCAGCAAAATCCAACCATAGTAATGCTCTTACAAGTCTGAGTCATCCTCACAGCACTGCATGCAAAACACAGCGCTATTAACTTTCAAGTGCGTTTGTGTGTTGATAGTTCGATATGCTTTCTAATTTGAGGAGCGATAAGGCTTGGACGAATTCTAATGActtgtttttaatgaacagtAGCCTGGTATGGAGTGCTTTTAAAAGGGAGACAACTTGTGTGCTCCATTAACCCTTTAATTCGACGCGTAACCGTACTTTAAAACTCTCTAGTGCCATCTGTGGATGAGAAAAACAAATTGTAAGGACCTTCTTTGCTTATGGACATGATGTGAACACATAAAAACAGTGATGGTGATTCTCGCTAAACTTAACCCAACAGGTCTAAATAAGAATCCTTATTTTAGGATTACCACAGAGATTTCCAAAGTAAAAAGGCAAGAATGCAGTACTGAACGTGTTCAGTAAAGAAGGGTTTAAAAACTGCTTACAACCTTGTATTTATGCCAATATACCAAGCAACCAAAATCTCCTTAAATGCCATAAAATATCCATAAAATCCATGAAATAGAGGTCATATATGATAAATTGCCTGtcactttttataaaatacaggGAATTTTCTGGGTGTTTTCCCaataaattgcataatttatagtaataatCTCCAAAACATGTACATATTATGTGATTTACAGTTATTCTGTTAACAGGTTTTTAGTAtatcattaaacattttcagtgtaA

Function

symbol description
ralab Predicted to enable GDP binding activity; GTP binding activity; and GTPase activity. Predicted to be involved in Ras protein signal transduction and regulation of exocytosis. Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human RALA (RAS like proto-oncogene A).
rala Enables several functions, including Edg-2 lysophosphatidic acid receptor binding activity; enzyme binding activity; and guanyl ribonucleotide binding activity. Involved in several processes, including actin cytoskeleton reorganization; membrane raft localization; and positive regulation of cellular component organization. Located in several cellular components, including cell surface; cleavage furrow; and focal adhesion. Colocalizes with endocytic vesicle. Biomarker of pancreatic ductal adenocarcinoma.

NR:

description
PREDICTED: ras-related protein Ral-A-like

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259697.1 False 2621 mRNA 0.40 6 10426028 10431073
XM_043259704.1 False 2587 mRNA 0.40 5 10426029 10431073
XM_043259710.1 True 2794 mRNA 0.45 8 10425919 10446802

Neighbor

gene id symbol gene type direction distance location
c2h7orf25 zgc:55781,cunh7orf25,LOC107689392,LOC107722560,LOC107718178,LOC107589835,LOC107585545 coding upstream 473 10422736 ~ 10425446 (+)
chd7 chd7,LOC107722533,LOC107718105,LOC107689390,LOC107589837,LOC107585562,LOC107688517 coding upstream 47697 10337523 ~ 10378222 (+)
rab2a rab2a coding upstream 89238 10325058 ~ 10336681 (+)
LOC122355329 cyp7a1,LOC107722516,LOC107693703,LOC107586715,LOC107691428,LOC107589909,LOC107718110 coding upstream 210052 10212891 ~ 10215867 (+)
fam110b fam110b,LOC107585622,LOC107722620,LOC107693712,LOC107691438,LOC107589841,LOC107718111 coding upstream 227643 10168240 ~ 10198276 (+)
plcd1b LOC107688433,LOC107722543,LOC107585437 coding downstream 47299 10494101 ~ 10506040 (+)
hhatla hhatl,LOC107688529,LOC107722653,LOC107689424,LOC107718176 coding downstream 75559 10522361 ~ 10528919 (+)
klhl40a klhl40a,LOC107722643,LOC107688437,LOC107586696,LOC107718175,LOC107689425 coding downstream 83806 10530608 ~ 10534110 (+)
bmi1b bmi1b,LOC107585379,LOC107688441,LOC107689401 coding downstream 138071 10584873 ~ 10590460 (+)
nebl nebl,LOC107722518,LOC107688530,LOC107718172,LOC107689428 coding downstream 165188 10611990 ~ 10616296 (+)
G10903 NA non-coding upstream 32769 10392693 ~ 10393150 (+)
G10902 NA non-coding upstream 33963 10391669 ~ 10391956 (+)
G10883 NA non-coding upstream 216068 10209563 ~ 10209851 (+)
G10838 NA non-coding upstream 283948 10141342 ~ 10141971 (+)
G10819 NA non-coding upstream 362105 10058532 ~ 10063814 (+)
G10918 inhbab,LOC107718177,LOC107589832 non-coding downstream 23319 10470121 ~ 10475283 (+)
LOC122359526 NA non-coding downstream 121079 10567881 ~ 10569008 (+)
G11077 NA non-coding downstream 311254 10758056 ~ 10831642 (+)
LOC122359515 NA non-coding downstream 373309 10820111 ~ 10822197 (+)
G11106 NA non-coding downstream 449881 10896683 ~ 10897497 (+)
selenof selenof,sep15,LOC107693704,LOC106598901 other upstream 264110 10158532 ~ 10161809 (+)
znf414 LOC107722538,LOC107564712,LOC107693731,LOC107691619,LOC107718126 other upstream 509058 9911628 ~ 9916861 (+)
arpc5a arpc5a,arpc5,LOC107722639,LOC107693740,LOC107564704,LOC107677751,LOC107718183 other upstream 674707 9746570 ~ 9751212 (+)
olfm3b olfm3b,LOC107700521,LOC107710604,LOC107745696,LOC107680049 other upstream 1254004 9162611 ~ 9171915 (+)
G10212 NA other upstream 2318142 8106865 ~ 8107777 (+)
lyrm4 lyrm4,LOC107718092,LOC107688446,LOC107722638,LOC107689406,LOC107688520 other downstream 215927 10662729 ~ 10665110 (+)
G10979 LOC107722568,LOC107585289,LOC107688450,LOC107718087,LOC107689412 other downstream 264328 10711130 ~ 10718194 (+)
LOC122359491 tesk2,si:dkeyp-75h12.2,LOC107585988,LOC107679327,LOC107602527,LOC107728975,LOC107714850,LOC107674209,LOC107562290,LOC107668671,LOC107588168,LOC107691921,LOC107753974 other downstream 673052 11119854 ~ 11135991 (+)
kcnh2a kcnh2a,LOC107718079,LOC107589806,LOC107722642,LOC107676096,LOC107586123 other downstream 782958 11229760 ~ 11264234 (+)
fitm1l LOC107589905,LOC107718171,LOC107585187,LOC107688462,LOC107722554 other downstream 856876 11303678 ~ 11338469 (+)

Expression


Co-expression Network