Item | Value |
---|---|
gene id | epb41l3b |
gene name | epb41l3b,epb41l3,LOC107689342,LOC107729731,LOC107750217,LOC108427206 |
gene type | coding |
species | tiger barb (Puntius tetrazona) |
category of species | ornamental fish |
Item | Value |
---|---|
chromosome id | NC_056700.1 |
NCBI id | CM032069.1 |
chromosome length | 25613461 |
location | 22515405 ~ 22549867 (+) |
genome version | ASM1883169v1_2021_tiger_barb_Genome |
symbol | description |
---|---|
epb41l3b | Predicted to enable actin binding activity and structural molecule activity. Predicted to be involved in actomyosin structure organization. Predicted to act upstream of or within cytoskeleton organization and regulation of cell growth. Predicted to be located in cell-cell junction. Predicted to be active in cytoskeleton and plasma membrane. Is expressed in several structures, including cardiovascular system; epidermis; nervous system; optic cup; and yolk syncytial layer. Orthologous to human EPB41L3 (erythrocyte membrane protein band 4.1 like 3). |
epb41l3 | Predicted to enable cytoskeletal protein-membrane anchor activity. Predicted to be a structural constituent of cytoskeleton. Predicted to be involved in several processes, including myelination; protein localization to juxtaparanode region of axon; and protein localization to paranode region of axon. Located in cell-cell junction and plasma membrane. Biomarker of meningioma. |
description |
---|
PREDICTED: band 4.1-like protein 3 |
id | name | namespace |
---|---|---|
GO:0005856 | cytoskeleton | cellular_component |
GO:0019898 | extrinsic component of membrane | cellular_component |
GO:0005737 | cytoplasm | cellular_component |
GO:0005198 | structural molecule activity | molecular_function |
GO:0003779 | actin binding | molecular_function |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_043260190.1 | False | 3460 | mRNA | 0.54 | 22 | 22521250 | 22549867 |
XM_043260198.1 | True | 3696 | mRNA | 0.53 | 22 | 22515576 | 22549867 |
XM_043260207.1 | False | 3493 | mRNA | 0.53 | 22 | 22523124 | 22549867 |
XM_043260211.1 | False | 3457 | mRNA | 0.54 | 22 | 22521250 | 22549867 |
XM_043260216.1 | False | 3415 | mRNA | 0.53 | 21 | 22521250 | 22549867 |
XM_043260227.1 | False | 3340 | mRNA | 0.54 | 21 | 22521250 | 22549867 |
XM_043260236.1 | False | 3495 | mRNA | 0.53 | 22 | 22515405 | 22549867 |
XM_043260244.1 | False | 3009 | mRNA | 0.51 | 21 | 22521251 | 22549867 |
XM_043260249.1 | False | 3006 | mRNA | 0.51 | 21 | 22521251 | 22549867 |
XM_043260257.1 | False | 2943 | mRNA | 0.52 | 20 | 22521251 | 22549867 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC122324242 | ephb1,LOC107549839,LOC107671589,LOC108430182,LOC106599529,LOC103359190 | coding | upstream | 189233 | 22134354 ~ 22326172 (+) |
gpc1b | gpc1b,LOC107660106,LOC107749182,LOC107730456,LOC107549820,LOC107600088,LOC107671591 | coding | upstream | 410304 | 22044868 ~ 22105101 (+) |
gpc5c | gpc5c,LOC107749179,LOC107660087,LOC107671592,LOC107730460 | coding | upstream | 489318 | 21929297 ~ 22026087 (+) |
trnam-cau_1 | NA | coding | upstream | 586586 | 21928747 ~ 21928819 (+) |
fndc7rs1 | NA | coding | upstream | 603736 | 21896676 ~ 21911669 (+) |
LOC122357060 | NA | coding | downstream | 12645 | 22562512 ~ 22572000 (+) |
LOC122323627 | NA | coding | downstream | 42732 | 22592599 ~ 22601454 (+) |
foxl2b | LOC107574316,LOC107730743,LOC107683772,LOC107750224,LOC107549802,LOC107684570 | coding | downstream | 89019 | 22638886 ~ 22640594 (+) |
pnp5b | pnp5b,LOC107730396,LOC107574318,LOC107750205,LOC107549813,LOC107684565 | coding | downstream | 109197 | 22659064 ~ 22665912 (+) |
ncstn | ncstn,LOC107552665,LOC107671788,LOC107696591,LOC107726318 | coding | downstream | 122234 | 22672101 ~ 22688316 (+) |
G14540 | NA | non-coding | upstream | 1468 | 22512171 ~ 22513937 (+) |
G14535 | NA | non-coding | upstream | 39203 | 22475781 ~ 22476202 (+) |
G14532 | NA | non-coding | upstream | 42802 | 22467860 ~ 22472603 (+) |
G14484 | LOC107568745 | non-coding | upstream | 600377 | 21913520 ~ 21915028 (+) |
G14477 | NA | non-coding | upstream | 619927 | 21895171 ~ 21895478 (+) |
G14542 | NA | non-coding | downstream | 27156 | 22577023 ~ 22578223 (+) |
G14549 | NA | non-coding | downstream | 93928 | 22643795 ~ 22650843 (+) |
G14578 | NA | non-coding | downstream | 192560 | 22742427 ~ 22786013 (+) |
G14553 | NA | non-coding | downstream | 226373 | 22776240 ~ 22777003 (+) |
LOC122357472 | NA | non-coding | downstream | 236854 | 22786721 ~ 22802473 (+) |
LOC122327302 | LOC107705949,LOC107599389,LOC107675701,LOC107737183,LOC107661566,LOC107586444,LOC107679834,LOC107719545,LOC107717972 | other | upstream | 29750 | 22461916 ~ 22485655 (+) |
fndc7a | fndc7a,LOC107660526,LOC107671595,LOC107730461,LOC107568736 | other | upstream | 648006 | 21857212 ~ 21867399 (+) |
G14471 | NA | other | upstream | 653963 | 21860891 ~ 21861442 (+) |
LOC122327294 | aknad1,LOC107749213,LOC107660326,LOC107730428,LOC107671582 | other | upstream | 662398 | 21843575 ~ 21853007 (+) |
ccl20a.3 | LOC107749165,LOC107660500,LOC107557866 | other | upstream | 799115 | 21714683 ~ 21716290 (+) |
LOC122327931 | NA | other | downstream | 83662 | 22633529 ~ 22674275 (+) |
fcer1gl | LOC107671799 | other | downstream | 141332 | 22691199 ~ 22695330 (+) |
LOC122324535 | NA | other | downstream | 453298 | 23003165 ~ 23005254 (+) |
G14831 | LOC107679389,LOC107745621,LOC107567694,LOC108428304 | other | downstream | 995239 | 23545106 ~ 23547974 (+) |
LOC122323670 | NA | other | downstream | 1386054 | 23935921 ~ 23939016 (+) |