LOC122360148 (LOC108278063)


Basic Information

Item Value
gene id LOC122360148
gene name LOC108278063
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 12369749 ~ 12371452 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260516.1
atgaaaagaaagaggTTTCCAGGAGAAAAGGAGGTATTTTGCACACTTGGTCTGAATGCATGCAGCAGACTAGCCTCTAGTATGGTTTGGGATCTTGGAAGGAATTTAGTTGATCAACTTGTTTCTGTTTGCATGACTGAGCTGACTGTTTAACCAAGGAGTGTTTAACAATACCACCTTTCGTAGTTGGGATTTGAGTCTGCATGGACAATGATGACTTAACAAAGAGCTACATGCAAATGTAAGtcttgtgtatattttattgaggctatttgcaaataatattaGGTTACTGTGGACTTGTTATAAAAATCCTAAACGCATAATCTTCTAATAATATTGTATACAGTGGTGATTCTCACTCTGGGATCCAGGACTGTCTGGGGAGCCATAGGaagatttaaatgatttaaattatttttttccataagCCAAGAATTTATTGAAGCACATTCAGTACAATCACATGAATTGTGGTCAGTTCAGGTGGGCATTTGAATATTCTTTTGGACAATAGGTGGGCTATCAAGTTAAACaagttgagaaccactggtgTGGAGGATATCACAAACATACTAATGAGTGAGTTCTGATGAGAAATGATTTGCATCTTTACAACTAATTGTGTTGTGGCTTGAGGTGTGTGTAGTGAGTAGATTTGGTTACTACGATTACATGATCAAACTAAGTCTCTCCCCAGAGCTTGCCCATGCCAAAGATGTTGGGTTAAAGCTGAGGGAAGCTCTGAAGCAGCAGCTCACCATCATCCACGAGAGAGTGGAGGCTAGGAAGATAGCTAAATTGGCTCTGGCAGAAGTGAGGAACATCCTAGccaaagaggaagaagagaggaCCTTGAACCATATCAGGGAGGAGTCGGAAGCCAAGGCCTGGGAGAGAGCTGAGGCTCGGCTGaaagaagagggagagagaataGAAAAAGAGGATGTGGAAAAGGCCATGGAAAGAATTAGAAGGGAGaaggaggaaagagagaaaatggtAGAAGTTGAAGAAGCAAAGAAGACTAAGAAGGTGGAAAAGGATGAGGTGAAGGCAGATGCTGAAAAGAAATCTCATGAGAAACCTATTATTGAAGACGATGCTAAAAAAGTTGAGAAAAATGGAAAAGGCAAAGAATCCAAGAAGGCTGCAGCTAAAAAGAAACTGTAAGGCTACTGTTAGATCTTCTCGTCTTCTGTGTAATTTAACAACTGGCTGAATTTGATATCAGGCCATTGTGAGTATCCTGAGACCACCCCTTGTAGACCGAAGGCAAGACCTTTCATCTCTATGAGAGAGATAATAGATGTTAAGCAGAACGTTGAGGTTAGTAGAAGCAAAAGCAGAACAAGGTGCTATATGCCGATCATCATGTGGAAGTTCTTTTATGTCTCTTAAAAACTGTCTGTTATGTTTTGATGGTAGGAATTTGGTTTACTCTTACAAAATGCTAGCTATATAGCGTGGGTTTTAAACATTGATGTTCCtctgattttgtttattttataataaatacaacagGCAGTGATACTTTAATAAGAGAGAACATTCTTGTGTTATCAATAAACTATATGAATCCTCTGATTGTTTTATCAGTGCCttgagtgtttttcttttcagtgttgatgaaaaacaaacagttgTATTAAAACTGGACATGTCTGTTCTCTAATAATATCTAtaaacttttcctttttcctc

Function

NR:

description
PREDICTED: aspartyl/asparaginyl beta-hydroxylase-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260516.1 True 1704 mRNA 0.38 1 12369749 12371452

Neighbor

gene id symbol gene type direction distance location
ttpa ttpa,LOC107688513,LOC107729218,LOC107584770,LOC107674130,LOC107602535 coding upstream 10687 12355888 ~ 12359062 (+)
lrrc42 LOC107729432,LOC107586495,LOC107602539,LOC107688527,LOC107682545 coding upstream 32823 12333787 ~ 12336926 (+)
LOC122328950 NA coding upstream 88245 12281372 ~ 12281504 (+)
LOC122328989 NA coding upstream 89090 12280590 ~ 12280659 (+)
LOC122328992 NA coding upstream 89735 12279911 ~ 12280014 (+)
impa1 impa1,impa1.3,LOC107688552,LOC107586492,LOC107602533,LOC107729422,LOC107714831,LOC107674158 coding downstream 5505 12376957 ~ 12380610 (+)
cdh7a cdh7,LOC107584702,LOC107602530,LOC108432272 coding downstream 116761 12488213 ~ 12541573 (+)
tesk2 tesk2,LOC107728975,LOC107679327,LOC107602527,LOC107714850,LOC107674209,LOC107585988 coding downstream 258579 12630031 ~ 12650410 (+)
si:ch73-382f3.1 si:ch73-382f3.1,LOC107586484,LOC107729092,LOC107602516,LOC107674450,LOC107714852,LOC107679322 coding downstream 282426 12653878 ~ 12656884 (+)
selenop2 LOC107679336,LOC107729074,LOC107674235 coding downstream 286594 12658046 ~ 12660442 (+)
G11505 NA non-coding upstream 30700 12337667 ~ 12339049 (+)
G11419 NA non-coding upstream 268623 12100875 ~ 12101126 (+)
G11207 LOC107688485,LOC107585026,LOC107550612,LOC107709892,LOC107722651 non-coding upstream 750886 11614241 ~ 11618863 (+)
LOC122328936 NA non-coding upstream 756183 11609251 ~ 11613566 (+)
G11191 NA non-coding upstream 912885 11456326 ~ 11456864 (+)
G11590 NA non-coding downstream 173901 12545353 ~ 12545592 (+)
G11593 NA non-coding downstream 242923 12614375 ~ 12614596 (+)
G11595 dsela,LOC107679326,LOC107584692,LOC107728919,LOC107714854,LOC107674195 non-coding downstream 244543 12615995 ~ 12621414 (+)
G11618 NA non-coding downstream 325634 12697086 ~ 12697294 (+)
G11622 NA non-coding downstream 374360 12745812 ~ 12759891 (+)
pld1a pld1a,LOC107688495,LOC107550602,LOC107680234,LOC107722545,LOC108442335 other upstream 432159 11908073 ~ 11937590 (+)
mast3a LOC107722547,LOC107688474,LOC107680242,LOC107550619,LOC107709878,LOC107586070 other upstream 862045 11482104 ~ 11507704 (+)
rps28 NA other upstream 925178 11422090 ~ 11444571 (+)
mrpl34 LOC107688463,LOC107585198,LOC107722555,LOC107680228 other upstream 1028638 11339735 ~ 11341111 (+)
fitm1l LOC107589905,LOC107718171,LOC107585187,LOC107688462,LOC107722554 other upstream 1031280 11303678 ~ 11338469 (+)
LOC122358236 NA other downstream 252371 12623823 ~ 12626387 (+)
rnf152 rnf152,LOC107729101,LOC107679332,LOC107567413,LOC107674343,LOC107714840,LOC107584540 other downstream 496477 12867929 ~ 12874008 (+)
G11854 jph1b,jph1,LOC107584332,LOC107550709,LOC107746914,LOC107732545,LOC107664083,LOC107686034,LOC107740042 other downstream 1803912 14175364 ~ 14179615 (+)
plxdc2a LOC107686089,LOC107713976,LOC107751571 other downstream 2374655 14746107 ~ 14753161 (+)
ackr4a LOC107664061,LOC107751559,LOC107556724,LOC107751558,LOC107751560,LOC107713978,LOC107586293 other downstream 2404870 14776322 ~ 14782977 (+)

Expression


Co-expression Network