si:ch73-14h1.2


Basic Information

Item Value
gene id si:ch73-14h1.2
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 9604188 ~ 9606195 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260979.1
CAATAAGGATGTTTATCCATATGCTCATTGTTTACCTTCCTGGTATCCAGCGCATATAAATGCCTCTTATTCCTGACCCACATCAGCTGCACTCATATTTTCTGGAAAGCGACTCGACATCGCTCTTTGATTTTGTCGAAGATGAACATACAGTTTGTGATACTGGTTTTTGGGCTGAATCTTTCTGCCGTAGCCGCGTTCAGCCACGGCGTGGTGACTCTGGCGTGCACGACTAGGACTCCTAATCATGGAGGCAATATTGCCTCTGTCTTACAGCCTCCATACAGCGTCACCACAGACGTCTCGAACTACACAGAGGGTCAGGTGATCACAGTGACGCTGCAAGCAAACCAGACTGAGTTCAGGGGCTTCCTTCTTCAGGCCAGGAACGAGATGGGTCCAGTAGGAACCTTCACAGTCGCGGGAAGTAATGCTCAGTTGCTCAGCTGCGAAGGGCAGCAGGACTCATCTGTCAGTCACAATTCAAACGTTAACAAATCAACTATAGTGGTTCAGTGGAAAGCTCCTTACACCAACAACAGAGATATTCACTTCAGGGCAACAGTTGTGCAGACGTTCTCCGTCTTCTGGGTTGGCATTGAAAGTGATCCTATTCGATTCGTGGGCAACTCCAGTCCATCCGTGTCTCTCACAGCCCATCTTCTTCTTTTACCTCTGCTGGCAATTCATTTTATAAGAACTACatgaacattttcaaaacccGTCTGTTCAATGTGCAATCACTAGCTTTCACATTCAGTCGTGTTATGTATTTGTTAAAGTGCAATGggactaaaaacataatattaaaaataatattttaagaatatattgattttacattacaatatatataaatgtttcctTTGACATAGAGCAACGTACTGGCCTCACTGTGCCCTacttttctgtttatatttactgtatataatgaagcttgtatgaaataaatggaTTTGTATCAAATGTTaagaatattttatgtatacgtgcatatacaaaaaaaacccaaacgcAACCAACATCTCAAAACGACCttagttttatttcttcttctaaaGCAAAAAACGAACACCaacaaaaaacgaaataaaacaaaaactttgtaCATATA
>XM_043260989.1
CAATAAGGATGTTTATCCATATGCTCATTGTTTACCTTCCTGGTATCCAGCGCATATAAATGCCTCTTATTCCTGACCCACATCAGCTGCACTCATATTTTCTGGAAAGCGACTCGACATCGCTCTTTGATTTTGTCGAAGATGAACATACAGTTTGTGATACTGGTTTTTGGGCTGAATCTTTCTGCCGTAGCCGCGTTCAGCCACGGCGTGGTGACTCTGGCGTGCACGACTAGGACTCCTAATCATGGAGGCAATATTGCCTCTGTCTTACAGCCTCCATACAGCGTCACCACAGACGTCTCGAACTACACAGAGGGTCAGGTGATCACAGTGACGCTGCAAGCAAACCAGACTGAGTTCAGGGGCTTCCTTCTTCAGGCCAGGAACGAGATGGGTCCAGTAGGAACCTTCACAGTCGCGGGAAGTAATGCTCAGTTGCTCAGCTGCGAAGGGCAGGACTCATCTGTCAGTCACAATTCAAACGTTAACAAATCAACTATAGTGGTTCAGTGGAAAGCTCCTTACACCAACAACAGAGATATTCACTTCAGGGCAACAGTTGTGCAGACGTTCTCCGTCTTCTGGGTTGGCATTGAAAGTGATCCTATTCGATTCGTGGGCAACTCCAGTCCATCCGTGTCTCTCACAGCCCATCTTCTTCTTTTACCTCTGCTGGCAATTCATTTTATAAGAACTACatgaacattttcaaaacccGTCTGTTCAATGTGCAATCACTAGCTTTCACATTCAGTCGTGTTATGTATTTGTTAAAGTGCAATGggactaaaaacataatattaaaaataatattttaagaatatattgattttacattacaatatatataaatgtttcctTTGACATAGAGCAACGTACTGGCCTCACTGTGCCCTacttttctgtttatatttactgtatataatgaagcttgtatgaaataaatggaTTTGTATCAAATGTTaagaatattttatgtatacgtgcatatacaaaaaaaacccaaacgcAACCAACATCTCAAAACGACCttagttttatttcttcttctaaaGCAAAAAACGAACACCaacaaaaaacgaaataaaacaaaaactttgtaCATATA

Function

GO:

id name namespace
GO:0006030 chitin metabolic process biological_process
GO:0006032 chitin catabolic process biological_process
GO:0046348 amino sugar catabolic process biological_process
GO:1901072 glucosamine-containing compound catabolic process biological_process
GO:0006026 aminoglycan catabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260979.1 True 1114 mRNA 0.41 5 9604188 9606195
XM_043260989.1 False 1111 mRNA 0.41 5 9604188 9606195

Neighbor

gene id symbol gene type direction distance location
agla agl,LOC107722579 coding upstream 3952 9578055 ~ 9600236 (+)
si:ch211-153l6.6 LOC107722596,LOC107693750,LOC107594655 coding upstream 33199 9563231 ~ 9570989 (+)
palmda palmd,LOC107722597,LOC107693751,LOC107677747,LOC107589899 coding upstream 41951 9554231 ~ 9562237 (+)
plppr4a plppr4,plppr4a,LOC107722652,LOC107589875,LOC107718168,LOC107682771 coding upstream 64665 9523028 ~ 9539523 (+)
ptbp2b ptbp2,ptbp2b,LOC107718150,LOC103030091,LOC108442283,LOC107570490 coding upstream 270861 9321702 ~ 9333327 (+)
olfml2bb olfml2bb,LOC107693709,LOC107722514,LOC107589916,LOC107677754,LOC107594675 coding downstream 18523 9624718 ~ 9630195 (+)
rxrga rxrga,LOC107693746,LOC107677771,LOC107718143,LOC107589872,LOC107722630 coding downstream 52191 9658386 ~ 9672517 (+)
prg4a LOC107594674,LOC107722510,LOC107693698,LOC107589871,LOC107677759 coding downstream 70060 9676255 ~ 9681969 (+)
odr4 c2h1orf27,LOC107693744,LOC107722540,LOC107718140,LOC107589896 coding downstream 96043 9702238 ~ 9709851 (+)
pla2g4aa pla2g4aa,LOC107722605,LOC107693742,LOC107718137,LOC107677770,LOC107594671,LOC107589895 coding downstream 125334 9731529 ~ 9745108 (+)
G10604 NA non-coding upstream 345 9602366 ~ 9603843 (+)
G10581 LOC107722512,LOC107693701,LOC107594678 non-coding upstream 26782 9577171 ~ 9577406 (+)
G10571 NA non-coding upstream 31395 9486177 ~ 9572793 (+)
G10557 NA non-coding upstream 149443 9454366 ~ 9454745 (+)
G10466 NA non-coding upstream 387524 9215505 ~ 9216664 (+)
G10674 kifap3b,LOC107693735,LOC107564707,LOC107722509,LOC107718166 non-coding downstream 219420 9825615 ~ 9826220 (+)
G10738 NA non-coding downstream 382948 9989143 ~ 10010746 (+)
G10749 NA non-coding downstream 386589 9992784 ~ 9993395 (+)
G10752 NA non-coding downstream 405742 10011937 ~ 10014366 (+)
G10753 NA non-coding downstream 408364 10014559 ~ 10015822 (+)
olfm3b olfm3b,LOC107700521,LOC107710604,LOC107745696,LOC107680049 other upstream 432273 9162611 ~ 9171915 (+)
G10212 NA other upstream 1496411 8106865 ~ 8107777 (+)
G10108 NA other upstream 2021803 7504622 ~ 7582385 (+)
gng12a gng12a,LOC107700509,LOC107716954,LOC107551713 other upstream 2304087 7285670 ~ 7300101 (+)
lrrc53 LOC107700485,LOC107588905,LOC107716924 other upstream 2498396 7098303 ~ 7105792 (+)
arpc5a arpc5a,arpc5,LOC107722639,LOC107693740,LOC107564704,LOC107677751,LOC107718183 other downstream 140375 9746570 ~ 9751212 (+)
znf414 LOC107722538,LOC107564712,LOC107693731,LOC107691619,LOC107718126 other downstream 305433 9911628 ~ 9916861 (+)
selenof selenof,sep15,LOC107693704,LOC106598901 other downstream 552337 10158532 ~ 10161809 (+)
lyrm4 lyrm4,LOC107718092,LOC107688446,LOC107722638,LOC107689406,LOC107688520 other downstream 1056534 10662729 ~ 10665110 (+)
G10979 LOC107722568,LOC107585289,LOC107688450,LOC107718087,LOC107689412 other downstream 1104935 10711130 ~ 10718194 (+)

Expression


Co-expression Network