LOC122360536


Basic Information

Item Value
gene id LOC122360536
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 14864146 ~ 14882630 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261250.1
CTCGTGATTGGCTGATGTTGTTCATAATTCATCAATCTCCTGGAGGACAGATGTAGACATGGCACTGTCTGGAATGATAGCATTTGGGTTGCTGGTACTCTTCACAGactgtcTAAATGGGCAAATTACGTATCCTAATCCTGTGATAATTAGGAGTAGTAGTAAAACTAGAACTGCTCTCATGAAATGCCAAGTGAATTCAGCGACGTATGCGTCCAGTGCTCTCCACTGGTACAGACTCAAAGATCAAGCTTTCAAAAGATTAATGTATTTCGAAGCTGGATCAAAAACAGCCGTAAAAGAACCCGATGCCTCCCCTAAAATATTTTCATCGGTGAAGGACGCGGATAAAAATAAGCAAGTAGAACTGACCCTCACTATCCCAAAACCGGACCTCGGTGATGCTGGCATATATTACTGCACGTACTGGAGTGAAGACAGGAAAGTCTTCGGTTCGGGTACAAGACTTTATGTGACAGAGCCAGGGAAAGACAAGTTCACGGCGCCAACGTTATCTGGGTACCTACcatcaaaaaaagacaaaaacaaaaaagacaaaaacggCAAGCAAACAATGTTATGCCATGCTAGTGGCATGTTCCCTGACTTGGTGAgatttgaatggaaaaaaaaagatgcagatCAATGGACGGCTGTATCAGAAGGAGATGTTGTGGAGCAGAGGAATGAAAAACCAGAGGTCACTGTGACAAGTATGTTGATTGTGGATAAAGACAAAGCCCAAAATGACAACTACAAATGCACTGTTATCCATGAGGGAAACACCGATGGAACCAAATCTCTGGAAATGAAGGAAGAAAGCAGTGAGCCGGCACAGAATCCTGAACAGAACGCAATTACCCCATGTCCAACAAGCACTGAGGTGCCCAAGGAAATGCAAAAAtcaggaGATTCGGAGCAAATGCCAAGCATGTTCCTGTTTATCTATGCATACCGTGTCTTGCTCTTGAAGAACGCTTTATTTTTTTGCGTCGTGTCCATATTTCTATTGAAGAGGAAAGCTGCAAGAAAAGACAAAAGCTCAGAGACTTAATCCACAAAAAGGGAACATTTCGCAAACTAAAGAACAGACGCATATCTGCAGCAATATCATCCCTGCTTGAATGCATGGCTTTTAAATACGTTGTAGATCTGCTttgcacaatttatttttgcatctttgGAAAGTTATGTTTTcgttttcataaatgtataatgcaACCAAATTTCAACTCTTTTGTTTTCGCATTGTACCGTTTTTGCTGCATTCTCAGAATTTGTTCAATAAAATCTACACTTTTTCA
>XM_043261261.1
TGTTGTTCATAATTCATCGATCTCCTGGAGGACAGATGTAGACATGGCACTGTCTGGAATGATAGCATTTGGGTTGCTGGTATTCTTCATAGactgtcTAAATGGGCAAATTACGTATCCTAATCCTGTGATAATTAGGAGTAGTAGTAAAACTAGAACTGCTCTCATGAAATGCCAAGTGAATTCAGCGACGTATGCGTCCAGTGCTCTCCACTGGTACAGACTCAAAGATCAAGCTTTCAAAAGATTAATGTATTTCGAAGCTGGATCAAAAACAGCCGTAAAAGAACCCGATGCCTCCCCTAAAATATTTTCATCGGTGAAGGACGCGGATAAAAATAAGCAAGTAGAACTGACCCTCACTATCCCAAAACCGGACCTCGGTGATGCTGGCATATATTACTGCACGTACTGGAGTGAAGACAGGAAAGTCTTCGGTTCGGGTACAAGACTTTATGTGACAGAGCCAGGGAAAGACAAGTTCACGGCGCCAACGTTATCTGGGTACCTACcatcaaaaaaagacaaaaacaaaaaagacaaaaacggCAAGCAAACAATGTTATGCCATGCTAGTGGCATGTTCCCTGACTTGGTGAgatttgaatggaaaaaaaaagatgcagatCAATGGACGGCTGTATCAGAAGGAGATGTTGTGGAGCAGAGGAATGAAAAACCAGAGGTCACTGTGACAAGTATGTTGATTGTGGATAAAGACAAAGCCCAAAATGACAACTACAAATGCACTGTTATCCATGAGGGAAACACCGATGGAACCAAATCTCTGGAAATGAAGGAAGAAAGCAGTGAGCCGGCACAGAATCCTGAACAGAACGCAATTACCCCATGTCCAACAAGCACTGAGGTGCCCAAGGAAATGCAAAAAtcaggaGATTCGGAGCAAATGCCAAGCATGTTCCTGTTTATCTATGCATACCGTGTCTTGCTCTTGAAGAACGCTTTATTTTTTTGCGTCGTGTCCATATTTCTATTGAAGAGGAAAGCTGCAAGAAAAGACAAAAGCTCAGAGACTTAATCCACAAAAAGGGAACATTTCGCAAACTAAAGAACAGACGCATATCTGCAGCAATATCATCCCTGCTTGAATGCATGGCTTTTAAATACGTTGTAGATCTGCTttgcacaatttatttttgcatctttgGAAAGTTATGTTTTcgttttcataaatgtataatgcaACCAAATTTCAACTCTTTTGTTTTCGCATTGTACCGTTTTTGCTGCATTCTCAGAATTTGTTCAATAAAATCTACACTTTTTCA
>XM_043261269.1
ATAGTGATGACGACGAGATATGAGAACAGAGGAAACCACGAGGCCATTCTCATTACCTCGTGATTGGCTGATGTTGTTCATAATTCATCAATCTCCTGGAGGACAGATGTAGACATGGCACTGTCTGGAATGATAGCATTTGGGTTGCTGGTACTCTTCACAGACTGTGTAAATGGACAAGTTAGGTACCCTGAACCTGTGATAGTTAAGGCAAGTACTAGAGCTGCTCCAATCACATTCGAAGTGGAGTCATCGACGCTTCAGTCCACTTCGGTCCATTTGTACAGAGCTCCACCAAAGGGAGCTATCCAACGATTGATGTATTTCACACCTGGTTCGTCAAAGGCTAATAAAGACCCCGATATCGACCGTAGAGTTTCTGCGTCGGTGAAGGGTAATAAAGTGTCACTGACTATTTCAAGACTGGAGCCCAAAGATGCTGGCTTGTATTACTGCGCCTTCTGGAGTGGAGACAGGAAAGTCTTCGGTTCGGGTACAAGACTTTATGTGACAGAGCCAGGGAAAGACAAGTTCACGGCGCCAACGTTATCTGGGTACCTACcatcaaaaaaagacaaaaacaaaaaagacaaaaacggCAAGCAAACAATGTTATGCCATGCTAGTGGCATGTTCCCTGACTTGGTGAgatttgaatggaaaaaaaaagatgcagatCAATGGACGGCTGTATCAGAAGGAGATGTTGTGGAGCAGAGGAATGAAAAACCAGAGGTCACTGTGACAAGTATGTTGATTGTGGATAAAGACAAAGCCCAAAATGACAACTACAAATGCACTGTTATCCATGAGGGAAACACCGATGGAACCAAATCTCTGGAAATGAAGGAAGAAAGCAGTGAGCCGGCACAGAATCCTGAACAGAACGCAATTACCCCATGTCCAACAAGCACTGAGGTGCCCAAGGAAATGCAAAAAtcaggaGATTCGGAGCAAATGCCAAGCATGTTCCTGTTTATCTATGCATACCGTGTCTTGCTCTTGAAGAACGCTTTATTTTTTTGCGTCGTGTCCATATTTCTATTGAAGAGGAAAGCTGCAAGAAAAGACAAAAGCTCAGAGACTTAATCCACAAAAAGGGAACATTTCGCAAACTAAAGAACAGACGCATATCTGCAGCAATATCATCCCTGCTTGAATGCATGGCTTTTAAATACGTTGTAGATCTGCTttgcacaatttatttttgcatctttgGAAAGTTATGTTTTcgttttcataaatgtataatgcaACCAAATTTCAACTCTTTTGTTTTCGCATTGTACCGTTTTTGCTGCATTCTCAGAATTTGTTCAATAAAATCTACACTTTTTCA
>XM_043261273.1
atccTCCTCTTAGAGATGCCAGCAGCAGTTCTGGGAGTGACTTTGGATCAAGGTCAAAAGGTTTTGGTTAAAGCAGAGGGCAAAACTATCTATCTGCCCTGCAAAGTGACTGGTTTGCAGAATTGGAATTATATCCATTGGTACCAAGTAAAGGATGGTGAAGCCCCATCGAGGCTACTCTATATCAGTCAAGGTGGTGATATTACTCGTGATAATAGTCAAGCAAATGACTTCACGGTGGACAAAACAAAGCTTTATGATCTAAAACTGAGCCACACTCTGAAGAGTCACACTGCAGTTTATTTCTGTGCCTACTGGGACTCAAGCAGATTAAACAGGAAAGTCTTCGGTTCGGGTACAAGACTTTATGTGACAGAGCCAGGGAAAGACAAGTTCACGGCGCCAACGTTATCTGGGTACCTACcatcaaaaaaagacaaaaacaaaaaagacaaaaacggCAAGCAAACAATGTTATGCCATGCTAGTGGCATGTTCCCTGACTTGGTGAgatttgaatggaaaaaaaaagatgcagatCAATGGACGGCTGTATCAGAAGGAGATGTTGTGGAGCAGAGGAATGAAAAACCAGAGGTCACTGTGACAAGTATGTTGATTGTGGATAAAGACAAAGCCCAAAATGACAACTACAAATGCACTGTTATCCATGAGGGAAACACCGATGGAACCAAATCTCTGGAAATGAAGGAAGAAAGCAGTGAGCCGGCACAGAATCCTGAACAGAACGCAATTACCCCATGTCCAACAAGCACTGAGGTGCCCAAGGAAATGCAAAAAtcaggaGATTCGGAGCAAATGCCAAGCATGTTCCTGTTTATCTATGCATACCGTGTCTTGCTCTTGAAGAACGCTTTATTTTTTTGCGTCGTGTCCATATTTCTATTGAAGAGGAAAGCTGCAAGAAAAGACAAAAGCTCAGAGACTTAATCCACAAAAAGGGAACATTTCGCAAACTAAAGAACAGACGCATATCTGCAGCAATATCATCCCTGCTTGAATGCATGGCTTTTAAATACGTTGTAGATCTGCTttgcacaatttatttttgcatctttgGAAAGTTATGTTTTcgttttcataaatgtataatgcaACCAAATTTCAACTCTTTTGTTTTCGCATTGTACCGTTTTTGCTGCATTCTCAGAATTTGTTCAATAAAATCTACACTTTTTCA
>XM_043261278.1
AAACATTTGTCATCAGATGAAtgatgtttttatacatttatatccTCCTCTTAGAGATGCCAGCAGTTCTGGGAGTGACTTTGGATCAAGGTCAAAAGGTTTTGGTTAAAGCAGAGGGCAAAACTATCTATCTGCCCTGCAAAGTGACTGGTTTGCAGAATTGGAATTATATCCATTGGTACCAAGTAAAGGATGGTGAAGCCCCATCGAGGCTACTCTATATCAGTCAAGGTGGTGATATTACTCGTGATAATAGTCAAGCAAATGACTTCACGGTGGACAAAACAAAGCTTTATGATCTAAAACTGAGCCACACTCTGAAGAGTCACACTGCAGTTTATTTCTGTGCCTACTGGGACTCAAGCAGATTAAACAGGAAAGTCTTCGGTTCGGGTACAAGACTTTATGTGACAGAGCCAGGGAAAGACAAGTTCACGGCGCCAACGTTATCTGGGTACCTACcatcaaaaaaagacaaaaacaaaaaagacaaaaacggCAAGCAAACAATGTTATGCCATGCTAGTGGCATGTTCCCTGACTTGGTGAgatttgaatggaaaaaaaaagatgcagatCAATGGACGGCTGTATCAGAAGGAGATGTTGTGGAGCAGAGGAATGAAAAACCAGAGGTCACTGTGACAAGTATGTTGATTGTGGATAAAGACAAAGCCCAAAATGACAACTACAAATGCACTGTTATCCATGAGGGAAACACCGATGGAACCAAATCTCTGGAAATGAAGGAAGAAAGCAGTGAGCCGGCACAGAATCCTGAACAGAACGCAATTACCCCATGTCCAACAAGCACTGAGGTGCCCAAGGAAATGCAAAAAtcaggaGATTCGGAGCAAATGCCAAGCATGTTCCTGTTTATCTATGCATACCGTGTCTTGCTCTTGAAGAACGCTTTATTTTTTTGCGTCGTGTCCATATTTCTATTGAAGAGGAAAGCTGCAAGAAAAGACAAAAGCTCAGAGACTTAATCCACAAAAAGGGAACATTTCGCAAACTAAAGAACAGACGCATATCTGCAGCAATATCATCCCTGCTTGAATGCATGGCTTTTAAATACGTTGTAGATCTGCTttgcacaatttatttttgcatctttgGAAAGTTATGTTTTcgttttcataaatgtataatgcaACCAAATTTCAACTCTTTTGTTTTCGCATTGTACCGTTTTTGCTGCATTCTCAGAATTTGTTCAATAAAATCTACACTTTTTCA
>XM_043261286.1
CCTGGAGGACAGATGTAGACATGGCACTGTCTGGAATGATAGCATTTGGGTTGCTGGTACTCTTCACAGCTGGATCAAAAACAGCCGTAAAAGAACCCGATGCCTCCCCTAAAATATTTTCATCGGTGAAGGACGCGGATAAAAATAAGCAAGTAGAACTGACCCTCACTATCCCAAAACCGGACCTCGGTGATGCTGGCATATATTACTGCACGTACTGGAGTGAAGACAGGAAAGTCTTCGGTTCGGGTACAAGACTTTATGTGACAGAGCCAGGGAAAGACAAGTTCACGGCGCCAACGTTATCTGGGTACCTACcatcaaaaaaagacaaaaacaaaaaagacaaaaacggCAAGCAAACAATGTTATGCCATGCTAGTGGCATGTTCCCTGACTTGGTGAgatttgaatggaaaaaaaaagatgcagatCAATGGACGGCTGTATCAGAAGGAGATGTTGTGGAGCAGAGGAATGAAAAACCAGAGGTCACTGTGACAAGTATGTTGATTGTGGATAAAGACAAAGCCCAAAATGACAACTACAAATGCACTGTTATCCATGAGGGAAACACCGATGGAACCAAATCTCTGGAAATGAAGGAAGAAAGCAGTGAGCCGGCACAGAATCCTGAACAGAACGCAATTACCCCATGTCCAACAAGCACTGAGGTGCCCAAGGAAATGCAAAAAtcaggaGATTCGGAGCAAATGCCAAGCATGTTCCTGTTTATCTATGCATACCGTGTCTTGCTCTTGAAGAACGCTTTATTTTTTTGCGTCGTGTCCATATTTCTATTGAAGAGGAAAGCTGCAAGAAAAGACAAAAGCTCAGAGACTTAATCCACAAAAAGGGAACATTTCGCAAACTAAAGAACAGACGCATATCTGCAGCAATATCATCCCTGCTTGAATGCATGGCTTTTAAATACGTTGTAGATCTGCTttgcacaatttatttttgcatctttgGAAAGTTATGTTTTcgttttcataaatgtataatgcaACCAAATTTCAACTCTTTTGTTTTCGCATTGTACCGTTTTTGCTGCATTCTCAGAATTTGTTCAATAAAATCTACACTTTTTCA

Function

GO: NA

KEGG:

id description
ko05340 Primary immunodeficiency

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261250.1 False 1304 mRNA 0.41 6 14864146 14882574
XM_043261261.1 False 1289 mRNA 0.41 6 14864146 14878735
XM_043261269.1 True 1339 mRNA 0.42 6 14864146 14882630
XM_043261273.1 False 1201 mRNA 0.41 7 14864146 14880179
XM_043261278.1 False 1239 mRNA 0.40 7 14864146 14880220
XM_043261286.1 False 1095 mRNA 0.41 6 14864146 14882536

Neighbor

gene id symbol gene type direction distance location
nol7 LOC107584088,LOC107713966 coding downstream 11912 14850608 ~ 14852234 (-)
retreg1 fam134b,LOC107751562,LOC107664066,LOC107686060,LOC107713983,LOC107584095 coding downstream 30108 14823155 ~ 14834038 (-)
and2 LOC107713965,LOC107751574,LOC107664022,LOC107585844,LOC107558199 coding downstream 45212 14815436 ~ 14818934 (-)
ralyl LOC107586268,LOC107686092,LOC107713968 coding downstream 51790 14796390 ~ 14812356 (-)
lrrcc1 lrrcc1,LOC107713973,LOC107686059,LOC107584102,LOC107751561,LOC107556739,LOC107664063 coding downstream 67959 14786980 ~ 14796187 (-)
amph amph,LOC107584026,LOC107701027,LOC107556781 coding upstream 2125 14884755 ~ 14908765 (-)
fam49ba fam49ba,LOC107718035,LOC107556887,LOC107713994,LOC107701021,LOC107657432 coding upstream 135739 15018369 ~ 15033769 (-)
asap1a asap1a,LOC107657433,LOC107701019,LOC107556902,LOC107718034 coding upstream 152326 15034956 ~ 15073086 (-)
ubtfl ubtfl,LOC107718032,LOC107583949,LOC107713995,LOC107556934 coding upstream 191055 15073685 ~ 15084154 (-)
slc4a2a slc4a2a,LOC107709836,LOC107657435,LOC107556941,LOC107718031 coding upstream 202732 15085362 ~ 15112144 (-)
G12175 epdr1,LOC107664036,LOC107558964 non-coding downstream 8977 14853694 ~ 14855169 (-)
G12176 LOC107664036,LOC107558964 non-coding downstream 10594 14852910 ~ 14853552 (-)
G12159 NA non-coding downstream 14713 14772490 ~ 14849433 (-)
G12161 NA non-coding downstream 88655 14773753 ~ 14775491 (-)
G12085 NA non-coding downstream 159688 14703637 ~ 14704458 (-)
G12199 NA non-coding upstream 52139 14934769 ~ 14935025 (-)
G12308 NA non-coding upstream 340581 15223211 ~ 15223455 (-)
G12313 ccr9a,LOC107579348,LOC107733890,LOC107657446,LOC107730785,LOC107557055,LOC107700981 non-coding upstream 355329 15237959 ~ 15240826 (-)
LOC122359617 NA non-coding upstream 664405 15547035 ~ 15553604 (-)
LOC122356097 NA non-coding upstream 835998 15718628 ~ 15754422 (-)
adcyap1b adcyap1b,adcyap1,LOC107713980,LOC107686049,LOC107751550,LOC107664073 other downstream 253880 14578995 ~ 14610266 (-)
LOC122328470 ptbp1a,ptbp3,LOC107602545,LOC107674042,LOC107732511,LOC107584874,LOC107558691,LOC107658670,LOC107744247,LOC107729315,LOC107688524 other downstream 1299781 13553773 ~ 13564365 (-)
LOC122323969 cahz,LOC107550722,LOC107755757,LOC107664098,LOC107686019,LOC107585971,LOC107751363,LOC108432254 other downstream 1393883 13315229 ~ 13470263 (-)
xkr4 xkr4,zgc:123035,LOC107728991,LOC107679338,LOC107714844,LOC107674319,LOC106569249 other downstream 2026053 12789524 ~ 12838093 (-)
hltf hltf,LOC107688483,LOC107722619 other downstream 3249208 11592441 ~ 11614938 (-)
faim2a faim2a,LOC107718029,LOC107701017,LOC107556958,LOC107657438,LOC107709826 other upstream 237957 15120587 ~ 15127491 (-)
smarcd3a smarcd3a,smarcd3,LOC107657439,LOC107599876,LOC107709803,LOC107556978,LOC107718026,LOC103039772 other upstream 251341 15133971 ~ 15153989 (-)
ccdc24 ccdc24,LOC107657456,LOC107599905 other upstream 677033 15559663 ~ 15579706 (-)
pappa2 pappa2,LOC107722077,LOC107568983,LOC107678935,LOC107726923,LOC107658303,LOC107558342 other upstream 1342093 16224723 ~ 16268835 (-)
LOC122362257 LOC107658348,LOC107563587,LOC107678922,LOC107726920,LOC107722065,LOC107559085 other upstream 1600530 16483160 ~ 16512019 (-)

Expression


Co-expression Network