LOC122361161


Basic Information

Item Value
gene id LOC122361161
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 5836648 ~ 5838633 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043262112.1
ATGATTCTTTTTGGAAGGGAGTTCCTTGTACCTCCATCCCCTGGCTCACCCGATAGTCCCATTCCTCCTGATGACTACTTTGAGGGTTCTGCTGCACGTAATGACTACATACCTATATATGCCTATGATAATTATCCCATAGGAAAAGCAGCCAATCCAATGGCCAGAGGAGGCCCACTGATGCCATATAACGATGAATTAAAAGGATACCCTTTACCCATGTTTCCAGTCTTGCCTGACCTATATCCCATTCTACTGAAACCTCTGTCCGGAAACACGACTCAAGGATCTCGCACAGTGCCTACTGGACAACAACCAGACCTTTCATACTGTAACGTGCTCCTTGAGGCACCAGTGCCTCCACCCATGGATCAAATGCCCTGGTTCTGTGTTTGCTTACAATGTAAAGGGGGTCCTAATAGTTCAAAGGGGAACAAAGGAGATCTGGGATTGCCAGGTCAAATAGGTGATATTGGTGAAAAAGGACATCTGGGCGCATTTGGCTTAAAAGGACTCAAAGGAGAACAAGGCCCCAAAGGTGATAAAGGGGACAGGGGTTTGGATGGAAATCAAGGACAGCAGGGTTTACCCGGTGAGACAGGACAGTgtccagtaatttgttactcaATCAAGGGATCCCAAGGAGAACTTGGTCATCCTGGCATGGCAGGGGGAAGAGGAGTTACAGGGTTGAGAGGAAGTCATGGATCGAAGGGCCAGAAAGGAGATTTGGGGGATGATGGTCCACAAGGAGCTCCAGGTTTAAATGGCCAGAAAGGAGACCAGGGTGAAAGAGGGGAGTGTCACTGCAGTGATGGAAGAGACGGTGCAAATGGAATTATCGGGATTTCAGGACTAAAAGGTAGCAATGGGGAGACTGGCCATCAAGGTGCAATAGggttaaatggagaaaaagggCAAAAGGGGGATCTTGGGGTAATGGGAGCTCCTGGTCCTTGCTCTTCAGCAATTCAATCCATTTTTTTAGCTGCACTAAGCAGCAAATACCCACAACCAGATTTGCCAGTTCCTTTCACTGATGTGTTTTCCAACAGAGGATTTAACTTTGACTCCATTAGAGGAGTCTACCGGGCTCCTCTCAGTGGTACCTATGTCATCAGCTACAACTTAGTTGGTTTCAACAAACTGCTCAAAGTGGGGCTCTTCCACAACTTCAGACCAGTCATCAAAAATACAGGGCCAGTAGTTCTTGCAATTTCTCAACAGGTTGTCCTGCATCTTATCATGGGGGATGAAGTTTGGCTACAAGTGAAAGACGTTGATTCCAATGGTATGTATTTTAACAGTGAGAGCAGCAGTACCTTCTCAGGCTTCCTGCTCTATCCAGATAGCTGTGATATGCCAACGTCAGGTGATTTTCAATATCCTATAAGTGGAACATACTCCTGGGGTTACTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043262112.1 True 1419 mRNA 0.47 3 5836648 5838633

Neighbor

gene id symbol gene type direction distance location
sft2d3 sft2d3,LOC107705299,LOC107653510,LOC107737414 coding upstream 28100 5807171 ~ 5808548 (+)
si:ch1073-184j22.1 si:ch1073-184j22.1,LOC107564249,LOC107653514,LOC107705312,LOC107660327,LOC107550431,LOC107724751,LOC108440865 coding upstream 35777 5794226 ~ 5800871 (+)
gnb4a LOC107705311,LOC107653516,LOC107564248,LOC108440866,LOC107724752,LOC107660315,LOC103030165,LOC107550449 coding upstream 57055 5765068 ~ 5779593 (+)
pex5lb pex5lb,LOC107564246,LOC107653517,LOC107660316,LOC107550448,LOC107724753 coding upstream 72789 5730605 ~ 5763859 (+)
foxf2a LOC107671725,LOC107745889,LOC107563086,LOC107685282,LOC107724048 coding upstream 944887 4888123 ~ 4891761 (+)
trnag-gcc_1 NA coding downstream 131017 5969650 ~ 5969724 (+)
trnag-gcc_2 NA coding downstream 132886 5971519 ~ 5971593 (+)
trnag-gcc_3 NA coding downstream 136082 5974715 ~ 5974786 (+)
trnag-gcc_4 NA coding downstream 139282 5977915 ~ 5977989 (+)
trnag-gcc_5 NA coding downstream 142530 5981163 ~ 5981233 (+)
G9690 NA non-coding upstream 3958 5832357 ~ 5832690 (+)
G9667 proc,LOC107705314,LOC107653506,LOC107737413 non-coding upstream 5533 5770058 ~ 5831115 (+)
G9671 NA non-coding upstream 111632 5724701 ~ 5725016 (+)
G9663 NA non-coding upstream 119242 5717178 ~ 5717406 (+)
G9660 NA non-coding upstream 130763 5702617 ~ 5705885 (+)
G9692 cldn15la,LOC107737418,LOC107550432,LOC107695160 non-coding downstream 13636 5852269 ~ 5859952 (+)
G9697 NA non-coding downstream 303409 6142042 ~ 6142865 (+)
G9758 NA non-coding downstream 537510 6376143 ~ 6376597 (+)
G9825 NA non-coding downstream 663757 6502390 ~ 6502594 (+)
G9827 NA non-coding downstream 673531 6512164 ~ 6512394 (+)
dusp28 dusp28,LOC107737412,LOC107695162,LOC107653509,LOC107705300,LOC107564257 other upstream 10362 5823993 ~ 5826286 (+)
G9630 LOC107705308,LOC107564255,LOC107728403 other upstream 227372 5608327 ~ 5609276 (+)
LOC122355892 foxc1,foxc1a,LOC107745890,LOC107576425,LOC107726170,LOC107563085,LOC105019236 other upstream 925472 4909129 ~ 4911176 (+)
LOC122361055 LOC107565287,LOC107667819 other upstream 937268 4898372 ~ 4899380 (+)
mylk4a mylk4,LOC107671735,LOC107562868,LOC107708588 other upstream 1246821 4572945 ~ 4589827 (+)
trnag-gcc_20 NA other downstream 381793 6220426 ~ 6220500 (+)
trnag-gcc_21 NA other downstream 383812 6222445 ~ 6222519 (+)
sst2 LOC107549725,LOC107710806 other downstream 528544 6367177 ~ 6367954 (+)
G9887 NA other downstream 851739 6690372 ~ 6690779 (+)
G9889 NA other downstream 853035 6691668 ~ 6692375 (+)

Expression


Co-expression Network