prss56 (prss8,LOC107557855,LOC107600103,LOC107749207,LOC107660469,LOC107579557,LOC107692867,LOC105418127,LOC107692866)


Basic Information

Item Value
gene id prss56
gene name prss8,LOC107557855,LOC107600103,LOC107749207,LOC107660469,LOC107579557,LOC107692867,LOC105418127,LOC107692866
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 21652740 ~ 21673600 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043262117.1
CAGACAGCAGTCTTCTAGCTTCCCACGGCTCTGGAGCTCCACGCTGACCAGCCTGCCAGACACCGCTGCCTCAAACGCCACCACAACCTCCTTCTCCACCAGAggatacacaaacacacctgagcagAACATTTCCAGCCTTGGCAAGTTCCTCGTGATTTGCTCTCATCGTCTTAATGAATTCAACTGGGAGTGCATTGGCCCTGATGCCCACCCCCTCAGAGAGAGGTCCAGTGCTCTTGCATATATCTGCAGGGCTGCTCCACGCTCTTCCATTGTTCCATCGGCTTCTTTCACCGACAGGTCCTCCGAGAGGGATTGTGAGAGAAAGCTAAGGAGGTGGGACGGCCTTGATGCGAAAGGAGCTGCGTTGAGTCTGTGCACCTGTGCTTTTAACTGGATCTCCTGAAGGCTGTAAGAAAATACGTTTTCCTATTGTAAGACTCACCTGTGGACAGGTGAAGTGGAATCATGGGTGTGATGTCACTGCTGCTGTTGATGGTGATTGGTTGGTGTGGTGGGGCGCCACCGGCGAGAGAGGTGTACAGAATGCCACAGAACGCACTTAAAGCGCTGTCTGATAGAGGAACAGTGGTGATGGAGGCCGCTCTGTCCCGAGCCCTGTCTGCGGTGGACGCTGCTGTATCGGACCGCAGCAAGGCCGAGGCAGGCTGCAGAGGGTGTGTGCCCTGTCTGTTTCAGGACTGTGGACAGCGAAAAGGCGCCTGTGCATCTCCAGAGGACACGCAGTCAGAGCCCAGCTGTGAGGTCATCTCTCGCGCCCAGCAGGAAGCTGGTGAAGGAGAGAGGAGCTGGTTGCTGAGTCAGGCCTGTGGCTTCTATAAACGCCGCTGCACACCTGCGCAGGTGAACAAAGACCTGTGCGTCAGGGTCATGGGAGAGAGCTGCAGCGCTCGGGTCCTGCAGTGCAGTCTGCTCAACACCATGCAGAACCTGGAGCCGGCCACACAGACCACAGCACAGGCTGTGTGTGGCCAGCGTTTCTCTGTTTCGCAAAACCTGACACAGCCTCGCTCTCGTATCATGGGGGGATCTCCTGCTCCTCTGGGCAGCTGGCCATGGCTGGTGAACCTTCGGCTGGACGGGGCTCTGATGTGTGGGGGTGTTCTGGTTGACAGCTCTTGGGTCCTCACTGCCGCCCATTGTTTTGCCGGGAGCCGTGGTGAGAGTTACTGGACAGCTGTAGTTGGAGAGTTTGACCTCACAAAAACTGACCCTGATGAGCAGGTCATGAAAGTCAATCGTATCATCACTCATCCGAAGTTTAACCCAAAGACATTTAATAACGACATTGCTCTGGTGGAGCTGAGTTCTCCAGTAATTCTGTCTGAACGGGTCACACCTGTCTGCCTGCCCTCTGACCTCGATCCCCCGGCTGGTACACCCTGCTTGGTGGCCGGCTGGGGCTCTTTATATGAGGACGGTCCCTCGGCAGATGTAGTGATGGAGGCGAAGGTGCCTCTGCTGTCTCAGACCACCTGTCGCAGCGCACTGGGGAAGGAGCTGCTCACCAACACCATGTTCTGCGCTGGGTACCTGTCTGGAGGCATCGACTCGTGCCAGGGTGATTCTGGAGGGCCGTTGATTCCAAGACCGTTTATCGGGCGGTTTCAGCTGTTTGGCATCACCTCTTGGGGGGATGGCTGTGGGGAGAGGGGAAAGCCTGGCGTTTACACACGGGTCACCGCCTTCTCTGATTGGGTCATGACAGAGATACAGAAGTCTTTCGGGAGTCGGGAGCCCACATGTCCTGAGCTGCTTAAGACAACTGAGCTGTCTGAAGAACAGCAGATGTCAGAATTTACCACGCTCTGCCACTTCTACACACTATCCTGCTCTTCGACCCTCGACCCCTCTGCCTGCCAGCGTCTCGCTCAGGACAAATGCCAAAGCCGGTTTAAGAAGTGCCAGTTACATTCCTTCTTGCAGACTCTGCTGGACTTGCTTCAGAGGGCCGATGACTACATCAGAGATAAAGTCGATCTGACCTTCTTTACTCAGACTCTTCCTCAGTTGGTGGAGAACGTGTACAGCTCTGCTCATATACCACGAAGACGCAGAAATGCACTTGAAACAGAACAGGTAGGCAGGCCAGCATTATTCCAGCACGTGGGCCCCCTGGTGGACGACTGGGAGAGCTACCTTACAGGCATTGCTGAAGATCTGGATCAACACAAAGAAGTAAAGAACTCACAGGAACTATCTGAGGAGCAACAGCTCTTCACACCGGATGAGGACAGTGAAAAAGCACCTCTTCAGCAGCTCGACGGATCACTGCGATCCTCCATCGCTGCCCTGCGTTCCAAACTAGAGTCACTGCACATTCCTGTCATACCAGAATTGGACAATCAACTATTTCAGAGAGATTTTACCTTTCCCACCACTGGACAACAACAGCAGGATAATAGTGACAAATCTAGCGAGTCTGTACTGTCTGCTGACATTTGGACTGCTTTGATATATAAAGCTCTGAGAGGAAGCGGCACAGGAAGTGTCACAGGACGTCCGGTGGTGACAGCATCCTCTCGGGATGATATGGATACAACATCAAGATCTGAGGAACCTCCAACACAACCATTGAAACTCAAGAACCAGAAACAACTGGTCCCTACCCAGATGTCCCTGCTTCAGCAGCCCCTCTTCAAAAAGCCCCtctggaggagaaagagagatcaGCGCAAGCGACAGAAAAGAGGAACCAATGACAAAGttTGCTCAGGAGTAACTGAATCAGCTCAGCTGGTCAGTACCACCAAAGAAATGTACAACTGGATCCTGTCTGTTCCATCTAACAACATAAACATGATCTTCCAGgagGTGCTGGTTGACCTGAATTCTAAGAATGAACGTGGTTTGTATCAGTCACGCATCAAGGCCACTGTCGGTGGGCGACCTTTGACCTTTTACAGCTTGGTGGGTTTAGAGAATGAGGCGTTCTACCGCAGCATGCCACGCATCATTGCAGTCGCCATTGATgctctaaaaacataaaacacactcACGTACGCTGCTGAAATTATACTTGAGCTGGAATGGCATCCCCAACGTTGAACATTATTACATCTTAAGCTCTCTAATGTGACCTGCTGCTATGGAAATGATTGGATGGGACCTCACAGGACAGCGGACTCTTCTGGAGTTGATCACTACGTACTAAGACTGGACTGATGGTGACTGCTTGTCCACCCTGACTTAACTTATTTCACAGAGACAGAGGTTGATCCTCCTGTCTGAGCTGCAAACTGTACAGATATtatatttgatgtttgttttatatttatttgtatttctttgtattttttatatggaaaataaagatgaaaacaaTTTA

Function

symbol description
prss8 Predicted to enable sodium channel regulator activity. Predicted to be involved in positive regulation of sodium ion transport and transepithelial transport. Predicted to act upstream of or within hair follicle development. Located in plasma membrane. Biomarker of breast carcinoma; ovarian cancer; and prostate carcinoma in situ.

NR:

description
PREDICTED: serine protease 56

GO: NA

KEGG:

id description
K23440 PRSS56; serine protease 56

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043262117.1 True 3352 mRNA 0.52 17 21652740 21673600

Neighbor

gene id symbol gene type direction distance location
alg3 alg3,LOC107557882,LOC107749127,LOC107730451,LOC107660011,LOC107692886 coding upstream 14822 21632030 ~ 21637918 (+)
yeats2 yeats2,LOC107692872,LOC107721785,LOC107749094,LOC107600062,LOC107557852 coding upstream 120456 21504200 ~ 21532284 (+)
klhl24a klhl24,klhl24a,LOC107749171,LOC107600063,LOC107659963,LOC107721788 coding upstream 151130 21483779 ~ 21501610 (+)
LOC122354646 LOC107660261,LOC107749204,LOC107600105,LOC107692861,LOC107721704,LOC101885431,LOC107557850 coding upstream 171874 21477659 ~ 21480866 (+)
mterf4 LOC107749141,LOC107659952,LOC107721702,LOC107600070 coding upstream 175216 21474611 ~ 21477524 (+)
chrng chrng,LOC107600056,LOC107749123,LOC107660019,LOC107692884,LOC107557864 coding downstream 2844 21676444 ~ 21681888 (+)
LOC122328123 LOC107730432,LOC107749146,LOC107600057,LOC107660295,LOC100536708 coding downstream 8431 21682031 ~ 21687571 (+)
LOC122355713 LOC107578657,LOC107730436,LOC107692891,LOC107692896 coding downstream 28491 21702091 ~ 21704894 (+)
camsap2b camsap2b,LOC107749095,LOC107730450,LOC107692873,LOC107660032 coding downstream 80805 21754405 ~ 21793590 (+)
wdr47a wdr47,wdr47a,LOC107749106,LOC107730459,LOC108428282 coding downstream 121088 21794688 ~ 21809332 (+)
G14285 NA non-coding upstream 95342 21556844 ~ 21557398 (+)
G14212 LOC107557873,LOC107721701 non-coding upstream 282241 21365808 ~ 21370499 (+)
G14234 NA non-coding upstream 306639 21342371 ~ 21346101 (+)
G13983 kif5b,LOC108232928,LOC106522897,LOC106906931,LOC103138015,LOC106962517,LOC103479480,LOC101155960 non-coding upstream 483853 21166088 ~ 21168887 (+)
G13995 LOC107749107,LOC107659422,LOC107563825 non-coding upstream 498958 21152103 ~ 21153782 (+)
G14315 NA non-coding downstream 43171 21716771 ~ 21717992 (+)
G14316 NA non-coding downstream 46318 21719918 ~ 21720575 (+)
LOC122359002 NA non-coding downstream 137329 21810929 ~ 21812903 (+)
G14476 NA non-coding downstream 221008 21894608 ~ 21895131 (+)
G14477 NA non-coding downstream 221571 21895171 ~ 21895478 (+)
ece2a ece2a,LOC107660439,LOC107600061,LOC107557862 other upstream 31643 21533245 ~ 21621097 (+)
LOC122354659 LOC107749134,LOC107659944,LOC107600069,LOC107692888,LOC107557869,LOC107721709,LOC101885494 other upstream 170098 21481134 ~ 21482642 (+)
G14211 NA other upstream 291032 21307407 ~ 21361708 (+)
G13998 LOC107659744,LOC107749160,LOC107563810,LOC107563823 other upstream 487918 21163942 ~ 21164822 (+)
LOC122326305 LOC107749119,LOC107602627,LOC107566983,LOC107690079,LOC107721763,LOC107721764,LOC107678697 other upstream 1144349 20493174 ~ 20508391 (+)
ccl20a.3 LOC107749165,LOC107660500,LOC107557866 other downstream 41083 21714683 ~ 21716290 (+)
LOC122327294 aknad1,LOC107749213,LOC107660326,LOC107730428,LOC107671582 other downstream 169975 21843575 ~ 21853007 (+)
fndc7a fndc7a,LOC107660526,LOC107671595,LOC107730461,LOC107568736 other downstream 183612 21857212 ~ 21867399 (+)
G14471 NA other downstream 187291 21860891 ~ 21861442 (+)
LOC122327302 LOC107705949,LOC107599389,LOC107675701,LOC107737183,LOC107661566,LOC107586444,LOC107679834,LOC107719545,LOC107717972 other downstream 788316 22461916 ~ 22485655 (+)

Expression


Co-expression Network