LOC122361612


Basic Information

Item Value
gene id LOC122361612
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 16722128 ~ 16723558 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043262423.1
CTTTCAATGTTGTCTTAATGCCTGACACACCTGATACCGTGAAACCGTGAATCGTTTGGTCAGTTAGCTGTAGCTGGCAGCGCTCGGTTGGGTCAGTTCGTCAGTTCCAATGCTTGTGTGGGGTCAGGAGTGTTTTTGTAAGGGTTACGGTAGCGGTGCATTTTCAGCTACTGACACCTTAACATTCGGAAAGCCGATAACCCTCAAGGTCTTACCAAaAGATGTATCGCCAGTCGCTCCATTTCTGTCCATATTGTCCCCTCTCACGGGCACTGGACAGGATATTTGTCTGGCCGCCGGGTTCTTTCCTGTAGAAAAGACTATGATTTTGACTGAAAAAGGTGCAGAATCTGAAAGTCTTTCCGTCAGCGGTGCACCCATCTTCGCAACGaccaaaaactattattttgctGGATTCAATGGCAAAAAAATCCAACAGTGTCAAATGGATAAAGAAGAAGCAGATAAAACTGAGACTCTTGAACCTCATGTCGTAACAGATAAACCTGAAATACAGACTGCACAGTCTTGTGAAACAAATAATGATACTTCTGAAGAGTTCATAAACGCTGGgGATCCAAAAATGAACTCCATAAACCTTCTTGTGACAGGTCTGAGAATTCTGCTTGCTAAATGTGTCGCAGTTAATGTAATGATGACCGTGAAggcattcatattttaaaaattcaattcaacTGTAACTTGATCTGACCCCAACAACCAAATGAGGTTATACAATCAGCCagtgtcaatatatatatatatatatatatatatatatatatatatatatatata

Function

GO:

id name namespace
GO:0004197 cysteine-type endopeptidase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG:

id description
ko05133 Pertussis

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043262423.1 True 798 mRNA 0.40 4 16722128 16723558

Neighbor

gene id symbol gene type direction distance location
smg7 LOC107563557,LOC107722067,LOC107658366,LOC107557277,LOC107678926 coding upstream 4026 16701077 ~ 16718102 (+)
lamc2 LOC107722066,LOC107658364,LOC107563561,LOC107678924,LOC107726891 coding upstream 32756 16677139 ~ 16689372 (+)
lamc1 lamc1,LOC107658363,LOC107563558,LOC107557259,LOC107678923,LOC107722047 coding upstream 51799 16625845 ~ 16670329 (+)
dhx9 dhx9 coding upstream 99095 16613776 ~ 16623033 (+)
rasal2 rasal2,LOC107678931 coding upstream 109662 16561384 ~ 16612466 (+)
LOC122356618 LOC107738189,LOC107684434,LOC107591326,LOC107559148,LOC107706401,LOC107659373 coding downstream 120163 16843721 ~ 16847555 (+)
ing5b ing5b,LOC107738258,LOC107706410,LOC107591443,LOC107557337,LOC107659430 coding downstream 271131 16994689 ~ 16996615 (+)
pak2a pak2a,LOC107738196,LOC107684413,LOC107659428,LOC107706409,LOC107557297,LOC107591323 coding downstream 273531 16997089 ~ 17009227 (+)
klhl6 klhl6,LOC107591321,LOC107706408,LOC107684416,LOC107558769,LOC107738218 coding downstream 286008 17009566 ~ 17014352 (+)
ptx3b LOC107591444,LOC107738195,LOC107684438,LOC107659376,LOC107559106 coding downstream 301625 17025183 ~ 17029802 (+)
G12607 NA non-coding upstream 28509 16690926 ~ 16693619 (+)
G12530 pappa2,LOC107568983,LOC107722077,LOC107558342,LOC107658303,LOC107678935,LOC107726923 non-coding upstream 457208 16263774 ~ 16264920 (+)
LOC122359940 LOC107743936,LOC101883431 non-coding upstream 687220 16032757 ~ 16034908 (+)
G12491 NA non-coding upstream 843724 15878134 ~ 15878404 (+)
G12451 NA non-coding upstream 910735 15810893 ~ 15811393 (+)
G12669 NA non-coding downstream 60342 16783900 ~ 16784544 (+)
G12729 LOC107678904 non-coding downstream 103472 16827030 ~ 16829326 (+)
LOC122356672 NA non-coding downstream 106550 16830108 ~ 16839463 (+)
G12730 NA non-coding downstream 107091 16830649 ~ 16831883 (+)
G12711 NA non-coding downstream 116013 16839571 ~ 16842431 (+)
LOC122323293 NA other upstream 265596 16450132 ~ 16456532 (+)
G12531 LOC107722077,LOC107568983 other upstream 453331 16267043 ~ 16268797 (+)
dars2 dars2,LOC107720851,LOC107700987,LOC107558296,LOC107599907 other upstream 846364 15860179 ~ 15875764 (+)
LOC122357435 LOC107733881,LOC107599885,LOC107657419 other upstream 1472879 15241797 ~ 15249249 (+)
ackr4a LOC107664061,LOC107751559,LOC107556724,LOC107751558,LOC107751560,LOC107713978,LOC107586293 other upstream 1939151 14776322 ~ 14782977 (+)
LOC122361622 NA other downstream 1056 16724614 ~ 16776351 (+)
golim4b golim4b,LOC107591324,LOC107684437,LOC107706331,LOC107559125,LOC107659375,LOC107738257 other downstream 308581 17032139 ~ 17039903 (+)
sppl2 sppl2,LOC107738168,LOC107706381,LOC107591351,LOC107659410,LOC107668984 other downstream 638687 17362245 ~ 17369102 (+)
G13114 tep1,LOC107591368,LOC107706362,LOC107659385,LOC107738210,LOC107591364,LOC107738151 other downstream 843283 17566841 ~ 17567916 (+)
G13111 LOC107738210,LOC107591364 other downstream 883694 17607252 ~ 17608092 (+)

Expression


Co-expression Network