zgc:154006 (LOC107722587,LOC107688535,LOC107585150,LOC107680250,LOC107718071,LOC107688536,LOC107722589)


Basic Information

Item Value
gene id zgc:154006
gene name LOC107722587,LOC107688535,LOC107585150,LOC107680250,LOC107718071,LOC107688536,LOC107722589
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 11367570 ~ 11377879 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043262679.1
AATGCCAGCCCGTGCCTGTCACCAGACTCACCAGCCTCTGGAGGTTTAATGTTTAATCTCTGCTCCGGCTTCCTGCTGCAGCCCCTCTCGCTCGCTTTTAACAGTCTTGTTTTTACTTTGTGAAGCCATTTTAGCGCAGCCATACTCACTAATAGCAAACCAGTCTATTCTGACAAGAACCTTCCAAAACAGTACAAGACCTTGATTTTCCCACCAGCTACAGCAAAATGACAGACCTTGGCAGACCGTATTCGGATGACATCTCATCCTCACAAAGTGAAGATTTCAACAGAGCACATGCAGACGAGGTTTCTTCAGAAATCGGTGACAATCCTGAGGACTCAAGATACTCCTCGTGTGAGCAGAGCCATTCGGACAAGGAAGCGGAGAAGATGGAAAAAAGTGCCTTGCTGAAATCTTGGACTGGTGTGTTTAAGAAGTGGAAGAAAACTGATTCGGAAACGCTTTCCACATCATCGGGAGAAATTAAAATACTTCCCAACGGCACAAGATGTAGTCCGCCTGTTTCTCCATTGTTGGACAGAAAACATTGGGATGCGCTTACAGGTGACCTCAAGGCAAACTTCCCCCCAGGTTCAGTGGGATACAAATATGACACGCTTGAATCTGAACTGACCAGTATCCATCCGGCAGAGTACTACGCTGAGAAGTTAGAGGTATACAAGTTAAAATACTCCTACCTGAAGTCTTGGCCTGGCCTTTTACGACTGCTTGCTGGCCTTCAACTGGTCTTCGGTGGGATGGTTTTCGCctgtgtatgtgcatatattcaAAGAGACAGTGAGTGGTCCAACTATTACAGGCCAAATTATGGGTTGGCTGGTGCGCAAGGATACCGTTACAGTGGTCCCTTGACAGCCTTTGTGTTGGTCATTGTTGGACTCTCATGGTTACTGACCGTTATCCTGCTGGTTTTGGGATTAACAATGTATTACAGAACAATCCTGTTGGATTCGAAATGGTGGCCTCTTACTGAGGCTGTAACCAATCTGGTCATTTCATTGCTGTATATGGCAGCGGGTATCGTCTACTTGAATGATCTGAATCGCGGTGGGCTTTGCTTTATGACGGTCGGCATCAACCCAGTCCTGTCTAGTCTCTGTCGTGTCGAGGGCGGTCAGATGGCTGGGACTGCGTTTATATTCATTAACATGGTCATGTACTTGATAAGCTTCCTAGTGTGTCTTAAAATGTGGAGGCATGAAGCTGCCCGTCGTGAGAAAGAGGCCAGGACAAGCCAGCTTAACAGCCAgGTACAGCAGCAAACTCTGAAATCCACATCCAATATGGGCAGCTCCTCGAGTAGATCCAAGAAAATTTCATTCAGAGACGAAATGGATCAAAGCTCTGTGAATAAGAGCAGGCTGGCTTATGTCTCAGAGAGAACTGAAGAACGAAAGATTTTAACTGGAGCTATTCCAACAGGACACATTCCTAAACTAAACACACCCACAGTCATCGCTGATTATATTTTaaaaTATCCTGAAATTCATTCAGTAGAGGACAGAGAGCAATACAAAGCAGTTTTTAATGACCAATACCAGGAGTACAAGGACCTGCACAGAGACATCACAGCCACTTTAATGAAGTTTCAGGAATTAGACAGCATGATGAGCCAACTCATGAATAACAGGAGAAACCCTGCGGAGAGTAAGAGAATCCGTGGATTACTtgaaaaatacaatcaaaaaaAGAACGACCCATACTTTCTGGAGAAGAAGGAACGGTGTCAATATCTGAAAGGAAAACTAAGCCACATCAAGATGAGAATTAGTGATTTTGATCAAAATTTCACTGCAAAGGAcagcaatATCATGTATGAAGCACAGCAGTATGACAGTCCACCGCAGTACAGTCCACACTACATTGCCCCATCAAATATGTACACATCCAGAAGTTTCTACTCTCAAAGAAGCGAGTATGGTTTATACTCTTCGGTGCCCGATGCTCCTCAAACGGAGGGAAACCCTCAGCACTTCTACAGATGGTTCTCCCCACCTGGCATTGTGAAAATGATGGAGGGACTGACCGCTCTGctctgttttgttatttttgcctGTGTTGCTTCCACTCTAGTTTGGGACATGCATGGCTACGAGGGGAGCATCGGAGCCTACGTTGCTGGATCTGGTGGTTATGGGATGGGTTCTGGGTACTATGGAGGAACCTACGGCTATCAGAGCTCTTATATGACGCCCTACTCAGCAAAATCAGCCATGATCTCCATGGCAGCCCTCAATTTCGTAGTGTCTTTGACCATCCTAGTGGTTAGTTTCTCAAAGACATGGTGTGTGTATGGAAAAACGTTTTACTTGACAGTTTTAGTGGTGAATGTGGTTATGGCGATTCTTCAGTGTATTATAGACATCATATTTGTCATTGGGGTGAATCCCATGGCCCAGAGTTCACAAAGCATCATGTACAACCCCATCCTAATGATGTGCCAGACCTCATTAGGGACTCCCAGCATCAGTGCTGGAGTTGGAACAGGCTTTCCGGGTGCATATCCATCCTTTAATCGATATCTCTATCACTACTGCTTCATGGATCCTGAGGAGGCTGTGGCTCTGGTGTGTGGGTTATTTGTCATGATGGCCCTGGTTGTTGCAGCCTATTTTGCCTATAAGACGCGAAGCAAAATGTGGCGTCATGGCAAACCTAATATCTATTGGGAGGAACCACCTATCCTCAGAATAGACAGGAGCCAGAATTCGCAAAACTGGCGAAGCACTCAATACACCCCCACTGTGGTTTTATCAGAGAAGGCTTCCCCTCATCTGAAAGCAGAGAACAGCTTCACCTCCTACACGGAGGGAACAGTGAGCGTCTACAGCGAGGGTGCATACAAAAGCAATGTGTATTCTGAGAACGCGAACAGTTGCTCCCCAGAGCCGTTGTACCAGAGCCGATGGATGAGCTCCAACACTGTGGAGGAGGTTGAAGTGCAGAGCAGCTCGGTGCAGGAGAAACCTGAAACGTACGAGGTAGAGGATGCGCTCTGTGAGATGGGTTACACCACTGGTGGAGATTCGGCCACTGAATTAGACACATACGAGCTGGAAAACTCTCATGCAGAAATTAAAACCGATGAAGTGCGCAGACAGTACAAGGAACAGTTTGATATCTCCCTCACTGAATACAAGAACCTCTGTGCAGAAATGGATAATGTCAGCGACCAAATGAATGAACTGAGCCGAGAACTGGACACCCTACATGAGGAATCCACCAAGTTCCAGGCTGTAGCTGATGAATATAATCGACTTAAGGATCTTAAGCGGTCTCCGGAATACCAAGCTAAGAAACTTCGGTGTAAAAAACTGAAGCAGGAGCTATGTAATATCAAACAACTGGTGAAAAATTATGACAGACGCTTTGCAAGGAGAGAGAAGACTATTACTACTGATCACCAGGATTTCTTTGTCTAAAACTTTACACGTGAATGCATACACTGTATACGTCTAGACTGAGTGAGTTGTGTTTAAAGTTACATGAATTTTCCTGTAAAATGAACCCTTTACAATTTGTATATAAAACTCTGAAAACATTTCCTTTCTCATTTGATAGGCTACTGGCAAAAAAAGGCACTTGCAAGCACATTGCAATGTATGATACTTTTGTTTAATCAAGCTGTCATACACaagtatttaaaaagacaaagatattaaaatgaaaactgta

Function

NR:

description
occludin-like

GO:

id name namespace
GO:0005923 bicellular tight junction cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005198 structural molecule activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043262679.1 True 3699 mRNA 0.45 14 11367570 11377879

Neighbor

gene id symbol gene type direction distance location
plvapa LOC107688534,LOC107722517,LOC107586083 coding downstream 11170 11353433 ~ 11356400 (-)
ano8a LOC107718073,LOC107688459,LOC107589801,LOC107586092,LOC107722556,LOC107680225 coding downstream 16906 11341388 ~ 11350664 (-)
myh7 vmhc,LOC107688458,LOC107722552,LOC107589804,LOC107680223 coding downstream 54852 11301092 ~ 11312718 (-)
slc12a7a LOC107722598,LOC107585218,LOC107589906,LOC107718080,LOC107688522 coding downstream 140321 11206444 ~ 11227249 (-)
LOC122359349 rabggtb,LOC107584851,LOC107732517,LOC107576861 coding downstream 208257 11155262 ~ 11159313 (-)
insl3 LOC107586604,LOC107722567,LOC107688537,LOC107680263,LOC107589901,LOC107709882 coding upstream 36427 11414306 ~ 11414845 (-)
si:rp71-39b20.4 si:rp71-39b20.4,LOC107585115,LOC107722566,LOC107688468,LOC107589795,LOC103032005 coding upstream 40063 11417942 ~ 11420734 (-)
crtc1a NA coding upstream 80572 11458451 ~ 11467496 (-)
LOC122361755 NA coding upstream 97742 11475621 ~ 11476171 (-)
nck1a nck1a,LOC107688485,LOC107585026,LOC107722651,LOC107709892,LOC107550612,LOC107680266 coding upstream 237944 11615823 ~ 11624104 (-)
G11246 NA non-coding downstream 67554 11293215 ~ 11300016 (-)
LOC122359499 LOC107689414,LOC107722600,LOC107585244,LOC107688455 non-coding downstream 197338 11167903 ~ 11170232 (-)
G11237 LOC107722600,LOC107585244,LOC107688455 non-coding downstream 200171 11165967 ~ 11167399 (-)
G11234 NA non-coding downstream 217066 11147248 ~ 11150504 (-)
LOC122359521 LOC107674200,LOC107602529,LOC107729365,LOC107584650,LOC107679329 non-coding downstream 246783 11116997 ~ 11120787 (-)
G11263 NA non-coding upstream 44791 11422670 ~ 11423431 (-)
LOC122328878 NA non-coding upstream 62123 11440002 ~ 11440899 (-)
G11280 NA non-coding upstream 76379 11454258 ~ 11455403 (-)
G11281 NA non-coding upstream 78447 11456326 ~ 11456854 (-)
G11292 pik3r2,LOC107688475,LOC107586063,LOC107722495,LOC107680216,LOC107709897,LOC107550618 non-coding upstream 134749 11512628 ~ 11513282 (-)
trnau1apb LOC107688461,LOC107585172,LOC107722553,LOC107680226,LOC107589802,LOC107718075,LOC102202587 other downstream 27959 11335718 ~ 11339611 (-)
LOC122359462 NA other downstream 464945 10897549 ~ 10902625 (-)
LOC122359216 tgfbr1a,LOC107688454,LOC107585257,LOC107722631,LOC107589809,LOC107718081,LOC107689415 other downstream 505975 10767974 ~ 10861595 (-)
G11105 LOC107688455,LOC107585244,LOC107722600 other downstream 564282 10800716 ~ 10803288 (-)
G11102 tgfbr1a,LOC107585257,LOC107722631,LOC107688454,LOC107689415,LOC107718081 other downstream 602679 10758028 ~ 10764891 (-)
kcnn1a LOC107722564,LOC107585128,LOC107718068,LOC107680246,LOC107589798 other upstream 1364 11379243 ~ 11405700 (-)
cnn2 cnn2,LOC107585101,LOC107688471,LOC107709904,LOC107550622,LOC107680261 other upstream 63111 11440990 ~ 11445113 (-)
crsp7 crsp7,LOC107722610,LOC107688472,LOC107550620,LOC107709903,LOC107585090,LOC107680253 other upstream 69210 11447089 ~ 11453203 (-)
G11317 pde4ca,pde4c,LOC107722623,LOC107680260 other upstream 198512 11576391 ~ 11577516 (-)
hltf hltf,LOC107688483,LOC107722619 other upstream 214562 11592441 ~ 11614938 (-)

Expression


Co-expression Network