crtc1a


Basic Information

Item Value
gene id crtc1a
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 11458451 ~ 11467496 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043262689.1
ATGGACGCCGCCGAGAGATCGGACAGGCGCGACGGCCGCCGACGAGGCCGGCGCTGCGCATCACAGCCGCATTACAATTATAGAAGACTAGATTACAGCCTGTCAGAACTTCGAGGACAGTACTTCATGTGCTCTGCCAAATACACTGATTGGAACACTACCATTGACCTTCTCAACTCTTTTCAGAATCCCGGGACTGACACGAGCAGAACGGTACTCCGCCACCAGTGCCGCGTGGAGAGGGGCCCATCGACAGGAATCGATCACGCCTACCACCAGAGCCTCTGTGACAGCCACGCCAGATATCCTGACGAAATACCCATGAAGCTGACTGATGTTCTGGTCTGCCGTATCCTACGGAAGAGCATCGCTCAGCAGTCTGCACACAGgaccAATCAGTACTCCGCCTCTGATCAGGAGCACTTTGAACCCAAACTCAAGCAAGAGTGCATTTGCAGGAGAGTCCCAAGATTTGCAGCCAAATACAAGTTCTTCTTCTCACTCATGCCAGGAAATATGCGAGATCTTGAAAGCATATTTCCATCTCCAGATCAGAAAATGACTGCATCTCTAATCCCAGCGGCGCACAACACGGGCGGCTCTCTGCCAGACCTGGACCAACATCCAGATTCCCCTCCCTCTCCCCACACCCTGGATCCTGATGACTCCTCATCCTCTCTCAGTGCCTCCAACAGCACTGGCAACCCTGGCCAACACTCATGGGCCTCACGTGTGACATCAGCCCAGCCCACAGCGACGATGAGCGTTCAGCGCCGCCATGAGAATGTAGTTCCCCTGATCCTCAACACAGACTCCCAGCAGCACCCGAGTCTTCAGCAGCTGTCGCCCCTCACCTCTCACCTCGCTCTCTCTCGCACAGTAGACGCCATGACGCTGGAGCAGCAGTTGGCTCAGTATGCGTTCTTCAGTCAGCCGTCCAGACACAGGGGTCGTGGGGCTTCCTCAGCTCCAGCAGAACACCCACTGCCACCTGTCTCTGGCAGCCAGACGCAAACCTCTGTGGGCATTGATATTAACCACTGCAAGAGATCCGCTGCTTCCCTCCAGCAGTACCGCTGTAGGGTGGGGTCTTCGCCAAATCAGTCTCCAACTTCTCCGGTCTCCAATCAAGGCTTCTCTCGGGGCTCGCCTCAACACTCATCCATTCTCGGAAGTGTCTTTGGTGATGCCTTTTACGACCAGCAGCTGTCCCCTCGGCAGACCAGCGCTTTGTCTCAGCAGCTGGAGCAGTTTAACATGATAGAGAATCCCATCAGCTCAAACAGTCTGTACACCGAGGGATCCACTCTGAACTACTCTCAAGCTGCGATGCTAAACCTCACCGGGAGCCACGGCAGCCTGCAGGACGCGCAGCAGCTAGGCTACAGCAGCCACGGGAATATCCCTAACATCATTCTCACAGGTGACGTGAGCTTTGACGCAGATTCCCAGTTCCCTCTGGATGAGCTGAAAATCGATCCGCTGACGCTGGACGGCCTGCACATGCTCAACGATCCGGACATGGTTCTGGCCGACCCCGCGACAGAGGATGCTTTCCGGATGGACAGGCTGTAATCTTTAAGTATACCATGTTCATTTGTCCTTCTTTGAGATGGGTGTGTTTAAATGGGAGAGGAGCAGCATGTCTGGAGGACACTTAGACCCTGTTTCTCAAAGCCCATCCTCTGGGAAGAGATTGCTGCGAATGCTGCCACGGCATGCTAGGGGGAAAAAATGGGAAAGCAGCGCTGC

Function

NR:

description
PREDICTED: CREB-regulated transcription coactivator 1-like isoform X2

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko05030 Cocaine addiction
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043262689.1 True 1752 mRNA 0.55 17 11458451 11467496

Neighbor

gene id symbol gene type direction distance location
si:rp71-39b20.4 si:rp71-39b20.4,LOC107585115,LOC107722566,LOC107688468,LOC107589795,LOC103032005 coding downstream 37717 11417942 ~ 11420734 (-)
insl3 LOC107586604,LOC107722567,LOC107688537,LOC107680263,LOC107589901,LOC107709882 coding downstream 43606 11414306 ~ 11414845 (-)
zgc:154006 LOC107722587,LOC107688535,LOC107585150,LOC107680250,LOC107718071,LOC107688536,LOC107722589 coding downstream 80572 11367570 ~ 11377879 (-)
plvapa LOC107688534,LOC107722517,LOC107586083 coding downstream 102051 11353433 ~ 11356400 (-)
ano8a LOC107718073,LOC107688459,LOC107589801,LOC107586092,LOC107722556,LOC107680225 coding downstream 107787 11341388 ~ 11350664 (-)
LOC122361755 NA coding upstream 8125 11475621 ~ 11476171 (-)
nck1a nck1a,LOC107688485,LOC107585026,LOC107722651,LOC107709892,LOC107550612,LOC107680266 coding upstream 148327 11615823 ~ 11624104 (-)
slc35g2a slc35g2a,LOC107709891,LOC107550608,LOC107680231,LOC107586575,LOC107688541,LOC107722521 coding upstream 160649 11628145 ~ 11631800 (-)
pccb pccb,LOC107688488,LOC107722577,LOC107709888,LOC107680238,LOC106574468 coding upstream 212417 11679913 ~ 11685059 (-)
nceh1a nceh1a,LOC107709885,LOC107722613,LOC107688490,LOC107584973,LOC107550609,LOC107680241 coding upstream 224055 11691551 ~ 11694478 (-)
G11281 NA non-coding downstream 1597 11456326 ~ 11456854 (-)
G11280 NA non-coding downstream 3048 11454258 ~ 11455403 (-)
LOC122328878 NA non-coding downstream 17552 11440002 ~ 11440899 (-)
G11263 NA non-coding downstream 35020 11422670 ~ 11423431 (-)
G11246 NA non-coding downstream 158435 11293215 ~ 11300016 (-)
G11292 pik3r2,LOC107688475,LOC107586063,LOC107722495,LOC107680216,LOC107709897,LOC107550618 non-coding upstream 45132 11512628 ~ 11513282 (-)
G11293 NA non-coding upstream 54495 11521991 ~ 11522473 (-)
G11294 NA non-coding upstream 56530 11524026 ~ 11524229 (-)
G11295 NA non-coding upstream 58371 11525867 ~ 11526352 (-)
G11296 NA non-coding upstream 59755 11527251 ~ 11527621 (-)
crsp7 crsp7,LOC107722610,LOC107688472,LOC107550620,LOC107709903,LOC107585090,LOC107680253 other downstream 5248 11447089 ~ 11453203 (-)
cnn2 cnn2,LOC107585101,LOC107688471,LOC107709904,LOC107550622,LOC107680261 other downstream 13338 11440990 ~ 11445113 (-)
kcnn1a LOC107722564,LOC107585128,LOC107718068,LOC107680246,LOC107589798 other downstream 52751 11379243 ~ 11405700 (-)
trnau1apb LOC107688461,LOC107585172,LOC107722553,LOC107680226,LOC107589802,LOC107718075,LOC102202587 other downstream 118840 11335718 ~ 11339611 (-)
LOC122359462 NA other downstream 555826 10897549 ~ 10902625 (-)
G11317 pde4ca,pde4c,LOC107722623,LOC107680260 other upstream 108895 11576391 ~ 11577516 (-)
hltf hltf,LOC107688483,LOC107722619 other upstream 124945 11592441 ~ 11614938 (-)
xkr4 xkr4,zgc:123035,LOC107728991,LOC107679338,LOC107714844,LOC107674319,LOC106569249 other upstream 1322028 12789524 ~ 12838093 (-)
LOC122323969 cahz,LOC107550722,LOC107755757,LOC107664098,LOC107686019,LOC107585971,LOC107751363,LOC108432254 other upstream 1847733 13315229 ~ 13470263 (-)
LOC122328470 ptbp1a,ptbp3,LOC107602545,LOC107674042,LOC107732511,LOC107584874,LOC107558691,LOC107658670,LOC107744247,LOC107729315,LOC107688524 other upstream 2086277 13553773 ~ 13564365 (-)

Expression


Co-expression Network