pkn2a (pkn2,LOC107693716,LOC107585639,LOC107722607,LOC107718113,LOC107691687)


Basic Information

Item Value
gene id pkn2a
gene name pkn2,LOC107693716,LOC107585639,LOC107722607,LOC107718113,LOC107691687
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10119973 ~ 10139585 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043263569.1
GAGGGTGTACTGGCCGTGGCTGAACTGGGTGCGGGAACAGAAACTTGCACTTGGGTCGCCCTGCCATCCGCCTCCCCTTGTTCCGATATTAGCAGCGCAGCTCTGCCTTCACCCCAAAAAGCGCGGATCTCGCTCCGAGCCCCGGTCCAAACCCTCGCGCTTACAGCTCAGCAATGGGACCCCCTCCGTATCCCGGCCACGCTATGGATCGTATCCCAAATAAAGCGCTTTTCGCTTGAGACGGAAACATAacaggcttgttttttttttgggagtGACTCACCTCCCCTTCCCCAGAGTTTGATTCAAAAAAGAGTTCACAACCAAGATGGCCGCCGATCCCATGCAGGCTCACATGGTTTCGGACCGGCTGGGCCTGGGGCAGAACCTTGACCTGTCTGATACCATGGTGCAGCAGAAGCTAGACGAAATCAAGGAGCAGATCAAGAGGGAGATCCGCAAAGAGCTGAAGATCAAAGAAGGGGTGGAGAACCTTAGAAAGGTcaccacagaaaaaaagagactggCATATGTTGATAATATGCTCAAGAAGTCCAACAAGAAGTTAGAGGAGCTGCATCAAGAGCTGCAGGAGCTCAACGCTCATATCGTTGTGAAGGATCCAGAGGATCTTCTCTTAGAGTGCCCTCTTACGCTGGACAGCCCTAAAAGTGAAGCACGGACATGCACTATCAGCAGCAGACTAGCAGCCCTGAAAAAACAGAACGACATTGAATTGAAGGTGAAACAGGGGGCCGAGAACATGATCCAGATGTATTCAAACGGCTCCTCAAAGGACAGAAAACTGCTTGCAACGGCACAGCAGATGCTTCAAGACAGCAAAACAAAGATCGAGTTCATCCGAATGCAGATTCTCAAAGCCAGCCAAACCAGCGAGCTCAGCTTCGACAACAATGATGTCATTGCCAAACCCATCATCAGTCCCCTGGACCTGCGGGTGGAGGAACTCTGCCATCACACGCGGATCGAGTACGCTGTGGCCGAGGGGGCCAAGAATGTCATGAAGCTGTTGGGCTCTGGTAAACTGGCTGAGAAGAGGGCTCACTCAGAGGCCCAAGCCAGGTTCAATGAGTCCAATCAGAAGCTGGATTTGTTGAAGTATTCCTTGGAGCAGAGACTCAATGAGCTTCCGAAGAACCATCCCAAGAGCAGTCTGATCATGGAGGAGTTATCCCTTATGTCCTCTCCAGCCCTCAGTCCTCGCCAGAGCTTCATATCCACACAGAACCACAACAGCACTGTTAAAAACCAGTATAGCACCAAACCAGCTGCACTCACAGGCAAATTAGAGGTTCGGCTCATGGGATGTCAGGACCTGTTAGACAGTGTTCCTGGCCGGTCTAAAGCCACGTCGGTGCCGCTGCCCGGTTGGAGCCCCAGTGAAACGCGCTCCTCTTTCATGAGCCGTGGGAACCGCAGAGGAACCAGCGTTCGGAATCTCTCCAAAAACGACGACTTGTCCAATGAGATTAGCGCTGTTCTGAAGCTCGACAACACTGTAGTTGGTCAGACCAGTTGGAAACCTGTCAGTAATCAGTCGTGGGACCAAAAGTTTACATTAGAGCTAGACCGGTCTCGTGAGCTGGAGATCTCTGTGTATTGGAGAGATTGGCGATCCCTTTGTGCGGTGAAATTCCTGCGACTGGAGGACTTCCTGGACAACCAGCGGCACGGAATGTGCCTTTACCTTGAGCCACAAGGGACTCTGTTTGCAGAGgttactttttttaatccagTCATTGAGAGACAAACCAAACTCCAAAGGCAGAAAAAGATCTTCTCAAAGCAACAAGGGAAACCGTTCCTGCGGGCCCCTCAGATGAGCATCGGGACGTGGGGCCGGCTGGTGAAGAGGGCCATTCCTTCTCCCAATAACACATTTAGCCCTCAAGTGGCGGAGCTGGCAGCTGAAACCGGACACAGCAGTCACCCGGGAACCCCAGCTCTGAGGAGTGACCCAATAGTGACAAAACTGGACTTTGACAAAGACGTTACACCAAAGCATTACTCTCCCGTCGGTATAAGAGAAGTCTTGCCTGAGGACAAGATCCCGAACAAAGAGCAAGAACAGGATgctttgacttcatttgactaCCGAAATGACAGGAATAGCATCATTGTTCAGTCTGAGCTTGAAGAAGTCGTGGAACATGAGGCTCAGCCGTCAGCGTTACAGCTCATAACTGTCCAGAAGAACACAGAAATAAGggatgaagaggaggaagaacaGTTTCATTTCAGTCTTAAAGACTTTAAATGTGTTGCAGTGTTAGGCCGTGGCCATTTTGGAAAGgTGTTATTAGCAGAATACAGTATTACAGGTGAAATGTTTGCCATCAAGGCCCTTAAGAAGGGAGATATTGTCGCCCGTGATGAAGTTGAAAGTTTGATGTGTGAGAAGAGGATATTCGAGACTGTGAACAGCGTGCGGCACCCGTTCCTCGTCAATCTTTTTGCATGTTTCCAGACCAAGgagcatgtgtgttttgtgatgGAGTATGCGGCAGGAGGAGACCTGATGATGCACATTCATGCCGATGTGTTTTCAGAGCCACGGGCCACGTTTTATGCAGCCTGTGTTGTCCTGGGGTTACAGTTTTTACACGAGCACAAGATTGTATACAGgGATCTGAAGTTGGATAACTTGCTGCTTGATACGGAGGGATTTGTCAAGATTGCCGACTTTGGTCTTTGTAAAGAAGGAATGGGTTACAGGGACAGAACAAGCACTTTCTGCGGCACTCCAGAGTTTCTGGCTCCCGAGGTGTTAACCGAAACTTCCTACACGCGTGCGGTGGACTGGTGGGGGCTCGGCGTGCTTATCTTTGAGATGCTTGTCGGGGAGTCTCCATTTCCtggtgatgatgaagaagaggTGTTCGACAGCATTGTGAATGACGAAGTTCGCTACCCAAGATTCCTCTCCACAGAAGCCATCTCCATTATGAGAAGGTTATTAAGAAGGAATCCCGGGCGACGACTTGGAGCCGGTGAACGTGATGCAGAAGACGTGAAGAAACATCTGTTCTTCAGGaatatggACTGGGATGGACTATTAGCAAAGAAAGTGAAGCCACCGTTTGTCCCCACAATCCAGAGTTCCAGTGACGTTAGTAATTTTGACGATGAATTTACCTCAGAGGCCCCGGTGCTCACACCGCCCAGAGAGCCCCGGCCCTTGACCCAGGACGAGCAGGACCTGTTTGCAGACTTCGACTATATCGCAGACTGGTGTTAGCCACGTGTTATCATCGCTccttctccacacacacacacacacacatacaaaaaatgtGAATCAGATCATTTGCAAATATCCCTTTTTTGttgtcagtgttattttaagaCTACCACAACCCCTTTTCCTTTTTAACATAatgaagaaactttttttatggaGTATGTGTGGGATAATTATTCATCAGGACCTAAGCACTGATcttgaaaaacacaaactaagCAGTGTAATTTACGACTGTGATGAACCATGTGATCAGGAGCCTCCCTGACACCCCCTGGTGTTGAGGAAGTCCACAGGCCACATCCACGTTCATCTTGCCCACGGAACCATGAGCCttcatttttatggttttgtttttgaagcatttACAATGcaactggtttaaaaaaaaaactatcttgTCAGCTCTCAATGTTAATTACATGAAAGCGTTTTAAAGCCATAGACTGAAATAATAGGTGATACTTGTACCTCATGCAATGAATGTATAGTTTTCCACTATTACCAAAACACTTAGCCATTTTTATGTAATGGAGTCTATACTCTTTCCCTACAGTACAGTATTAATGCATTGTGATCCAAGTCACAACGAAAACCACAAATATGAACCACCAGTTACGACACTAGTCATACAGGAACAGGAAATGCGTTTGCTTCCATTCACAAGTTATTTTTCGATCAAGTTTCAGGATAggatcatgttttgttttgttaccaGACTTAAGCTGTCAGTGgatttacactactgttcaaaagtttgaggtcagtaggatgttttttaagttaatattgtaatttaacaCCGAAAATTCGGCTTTGCGGTGACAGGAACacatcaaatttgaaaatatattcaagtaCTAagctgtaatttaaaatattatttctcaatttttactgtttttgtttaaatagatCTCAAATCGAAGAGGTTTCTTTCAGAAAcgttaaatgttttagtttttttttaacaacctcaaacttttaaacagtagtgtgtATGTGACAGGCAATCATATTACCTCATTACCTAGTTGTTCCCTACTGAAATTCTTCcactttctgttttcttttatatgtgGACATGACAGACTGGAATCTATGCTAGACAccaaatatcaatatatactAATAAGTGGTctagatgttaaaaaaaataggcCTGAAGCTTCACGTGTGTAATAAGCAATCCAAGTGGAGGGGTAGATGCTAGATGGAGGTCTGATGTATTATAGGCTACACTACATAAACACTATCAAGCTGGAAGCACTaatttttgtctaaaatatCCGTGTTTTATCGAAATGGTGggtgtacaaaaacaaaaggagTGTACAAAGGTTTTTACCCACTGCTTGTGTGTCTGAGCATGATGCAGAAGAAAGGTTTCAAAGGTACAGCCGTGAAGTTTGACTTGACAATGGTGTAAATAACAGGTTTTGCTGAAACTGTCAGCCATcatgaatgcaaaaaattaaatgtttattatgtaa
>XR_006253077.1
TCGAGGGTGTACTGGCCGTGGCTGAACTGGGTGCGGGAACAGAAACTTGCACTTGGGTCGCCCTGCCATCCGCCTCCCCTTGTTCCGATATTAGCAGCGCAGCTCTGCCTTCACCCCAAAAAGCGCGGATCTCGCTCCGAGCCCCGGTCCAAACCCTCGCGCTTACAGCTCAGCAATGGGACCCCCTCCGTATCCCGGCCACGCTATGGATCGTATCCCAAATAAAGCGCTTTTCGCTTGAGACGGAAACATAacaggcttgttttttttttgggagtGACTCACCTCCCCTTCCCCAGAGTTTGATTCAAAAAAGAGTTCACAACCAAGATGGCCGCCGATCCCATGCAGGCTCACATGGTTTCGGACCGGCTGGGCCTGGGGCAGAACCTTGACCTGTCTGATACCATGGTGCAGCAGAAGCTAGACGAAATCAAGGAGCAGATCAAGAGGGAGATCCGCAAAGAGCTGAAGATCAAAGAAGGGGTGGAGAACCTTAGAAAGGTcaccacagaaaaaaagagactggCATATGTTGATAATATGCTCAAGAAGTCCAACAAGAAGTTAGAGGAGCTGCATCAAGAGCTGCAGGAGCTCAACGCTCATATCGTTGTGAAGGATCCAGAGGATCTTCTCTTAGAGTGCCCTCTTACGCTGGACAGCCCTAAAAGTGAAGCACGGACATGCACTATCAGCAGCAGACTAGCAGCCCTGAAAAAACAGAACGACATTGAATTGAAGGTGAAACAGGGGGCCGAGAACATGATCCAGATGTATTCAAACGGCTCCTCAAAGGACAGAAAACTGCTTGCAACGGCACAGCAGATGCTTCAAGACAGCAAAACAAAGATCGAGTTCATCCGAATGCAGATTCTCAAAGCCAGCCAAACCAGCGAGCTCAGCTTCGACAACAATGATGTCATTGCCAAACCCATCATCAGTCCCCTGGACCTGCGGGTGGAGGAACTCTGCCATCACACGCGGATCGAGTACGCTGTGGCCGAGGGGGCCAAGAATGTCATGAAGCTGTTGGGCTCTGGTAAACTGGCTGAGAAGAGGGCTCACTCAGAGGCCCAAGCCAGGTTCAATGAGTCCAATCAGAAGCTGGATTTGTTGAAGTATTCCTTGGAGCAGAGACTCAATGAGCTTCCGAAGAACCATCCCAAGAGCAGTCTGATCATGGAGGAGTTATCCCTTATGTCCTCTCCAGCCCTCAGTCCTCGCCAGAGCTTCATATCCACACAGAACCACAACAGCACTGTTAAAAACCAGTATAGCACCAAACCAGCTGCACTCACAGGCAAATTAGAGGTTCGGCTCATGGGATGTCAGGACCTGTTAGACAGTGTTCCTGGCCGGTCTAAAGCCACGTCGGTGCCGCTGCCCGGTTGGAGCCCCAGTGAAACGCGCTCCTCTTTCATGAGCCGTGGGAACCGCAGAGGAACCAGCGTTCGGAATCTCTCCAAAAACGACGACTTGTCCAATGAGATTAGCGCTGTTCTGAAGCTCGACAACACTGTAGTTGGTCAGACCAGTTGGAAACCTGTCAGTAATCAGTCGTGGGACCAAAAGTTTACATTAGAGCTAGACCGGTCTCGTGAGCTGGAGATCTCTGTGTATTGGAGAGATTGGCGATCCCTTTGTGCGGTGAAATTCCTGCGACTGGAGGACTTCCTGGACAACCAGCGGCACGGAATGTGCCTTTACCTTGAGCCACAAGGGACTCTGTTTGCAGAGgttactttttttaatccagTCATTGAGAGACAAACCAAACTCCAAAGGCAGAAAAAGATCTTCTCAAAGCAACAAGGGAAACCGTTCCTGCGGGCCCCTCAGATGAGCATCGGGACGTGGGGCCGGCTGGTGAAGAGGGCCATTCCTTCTCCCAATAACACATTTAGCCCTCAAGTGGCGGAGCTGGCAGCTGAAACCGGACACAGCAGTCACCCGGGAACCCCAGCTCTGAGGAGTGACCCAATAGTGACAAAACTGGACTTTGACAAAGACGTTACACCAAAGCATTACTCTCCCGTCGGTATAAGAGAAGTCTTGCCTGAGGACAAGATCCCGAACAAAGAGCAAGAACAGGATgctttgacttcatttgactaCCGAAATGACAGGAATAGCATCATTGTTCAGTCTGAGCTTGAAGAAGTCGTGGAACATGAGGCTCAGCCGTCAGCGTTACAGCTCATAACTGTCCAGAAGAACACAGAAATAAGggatgaagaggaggaagaacaGTTTCATTTCAGTCTTAAAGACTTTAAATGTGTTGCAGTGTTAGGCCGTGGCCATTTTGGAAAGgTGTTATTAGCAGAATACAGTATTACAGGTGAAATGTTTGCCATCAAGGCCCTTAAGAAGGGAGATATTGTCGCCCGTGATGAAGTTGAAAGTTTGATGTGTGAGAAGAGGATATTCGAGACTGTGAACAGCGTGCGGCACCCGTTCCTCGTCAATCTTTTTGCATGTTTCCAGACCAAGgagcatgtgtgttttgtgatgGAGTATGCGGCAGGAGGAGACCTGATGATGCACATTCATGCCGATGTGTTTTCAGAGCCACGGGCCACGTTTTATGCAGCCTGTGTTGTCCTGGGGTTACAGTTTTTACACGAGCACAAGATTGTATACAGgGATCTGAAGTTGGATAACTTGCTGCTTGATACGGAGGGATTTGTCAAGATTGCCGACTTTGGTCTTTGTAAAGAAGTCTCCATTTCCtggtgatgatgaagaagaggTGTTCGACAGCATTGTGAATGACGAAGTTCGCTACCCAAGATTCCTCTCCACAGAAGCCATCTCCATTATGAGAAGGTTATTAAGAAGGAATCCCGGGCGACGACTTGGAGCCGGTGAACGTGATGCAGAAGACGTGAAGAAACATCTGTTCTTCAGG

Function

symbol description
pkn2 Enables RNA polymerase binding activity; histone deacetylase binding activity; and protein serine/threonine kinase activity. Involved in several processes, including apical junction assembly; positive regulation of cell cycle; and positive regulation of viral genome replication. Located in several cellular components, including cleavage furrow; cytoskeleton; and midbody.

NR:

description
PREDICTED: serine/threonine-protein kinase N2

GO: NA

KEGG:

id description
K23691 PKN2; serine/threonine-protein kinase N2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043263569.1 True 4755 mRNA 0.46 22 10119973 10139583
XR_006253077.1 False 2914 transcript 0.50 20 10121767 10139585

Neighbor

gene id symbol gene type direction distance location
lrrc8da lrrc8d,lrrc8da,LOC107722644,LOC107585666,LOC107718115,LOC107691468,LOC107589846,LOC107722505 coding downstream 6388 10108131 ~ 10113585 (-)
sept2 sept2,LOC107722571,LOC107693718 coding downstream 48510 10062763 ~ 10071463 (-)
bokb bokb,LOC107693720,LOC107722584 coding downstream 66530 10049401 ~ 10053443 (-)
zgc:161973 LOC107722582,LOC107693721,LOC107718160,LOC107585707 coding downstream 74093 10040661 ~ 10045880 (-)
kif1ab kif1ab,LOC107722550,LOC107691514,LOC107693723,LOC108432503,LOC107589853 coding downstream 86675 10008346 ~ 10033298 (-)
hs2st1a hs2st1a,hs2st1,LOC107718112,LOC107589844,LOC107691454,LOC107722647,LOC107585633,LOC106598897 coding upstream 6997 10146582 ~ 10158021 (-)
tox tox,LOC107718108,LOC107722616,LOC107585594 coding upstream 83746 10223331 ~ 11062973 (-)
trnak-cuu_1 NA coding upstream 249966 10389551 ~ 10389623 (-)
LOC122359424 mplkip,LOC107722562,LOC107585495,LOC107688429,LOC107718104,LOC107689394,LOC107589834 coding upstream 290209 10429794 ~ 10433121 (-)
inhbab inhbab,LOC107718177,LOC107589832 coding upstream 325724 10465309 ~ 10476229 (-)
G10812 NA non-coding downstream 72600 10046818 ~ 10047373 (-)
G10773 NA non-coding downstream 192136 9926105 ~ 9927837 (-)
G10708 NA non-coding downstream 371233 9748387 ~ 9748740 (-)
G10621 NA non-coding downstream 513778 9605638 ~ 9606195 (-)
G10562 NA non-coding downstream 658889 9457163 ~ 9461084 (-)
G10869 selenof,sep15,LOC107693704,LOC107586130 non-coding upstream 18993 10158578 ~ 10160064 (-)
G10987 NA non-coding upstream 86633 10226218 ~ 10226856 (-)
G11057 NA non-coding upstream 526892 10666477 ~ 10666712 (-)
G11064 rpp40,LOC107722637,LOC107688445,LOC107689405 non-coding upstream 528057 10667642 ~ 10668967 (-)
G11063 rpp40,LOC107688445,LOC107722637,LOC107689405 non-coding upstream 529477 10669062 ~ 10669414 (-)
hfm1 hfm1,LOC107722645,LOC107586144 other downstream 24116 10080182 ~ 10095857 (-)
si:ch211-267e7.3 si:ch211-267e7.3,LOC107722581,LOC107594654,LOC107718186,LOC107589917,LOC107677774,LOC107693699 other downstream 501500 9606323 ~ 9618473 (-)
plppr5a plppr5,plppr5a,LOC107722655,LOC107693754,LOC107677753,LOC107589876,LOC108441579,LOC107718169 other downstream 600192 9491563 ~ 9519781 (-)
abca4b abca4,abca4b,LOC107564534,LOC107680047,LOC107745690 other downstream 909932 9182056 ~ 9210041 (-)
zfyve9a LOC107700554,LOC107563295,LOC107677579,LOC107553256,LOC107732202 other downstream 1692069 8403327 ~ 8427904 (-)
lmo4 LOC107722609,LOC107693715,LOC107691760,LOC107589910 other upstream 1350 10140935 ~ 10143709 (-)
ca8 ca8,LOC107693711,LOC107585586,LOC107691405,LOC107589840,LOC107722503,LOC102778484 other upstream 174448 10314033 ~ 10320403 (-)
G11011 chd7,LOC107585562,LOC107722533,LOC107688517,LOC107718105,LOC107589837,LOC107689390 other upstream 236478 10376063 ~ 10378211 (-)
fbxl7 fbxl7,LOC107718179,LOC107689422,LOC107688519,LOC107589836,LOC107722558,LOC107585539 other upstream 253097 10392682 ~ 10421475 (-)
G11102 tgfbr1a,LOC107585257,LOC107722631,LOC107688454,LOC107689415,LOC107718081 other upstream 618443 10758028 ~ 10764891 (-)

Expression


Co-expression Network