plk3 (plk3,LOC107722069,LOC107563563,LOC107658359,LOC107726922,LOC107678927,LOC107557223)



Basic Information


Item Value
gene id plk3
gene name plk3,LOC107722069,LOC107563563,LOC107658359,LOC107726922,LOC107678927,LOC107557223
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 16501052 ~ 16507898 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>XM_043263630.1
GCGCGGCATGTTTGACTCGCACAGGACTAACGTTAGAGAACTTCGTCAGACTTTGGGACTTCGCACAAGGAGTTTATTTTCTAGGGCGAGGGATCTAGATGAATGGATCCCGCTTGTTTTACCTCAGCGCAGCGTCTCTCCTGTAAAATGATGAATCCGGATTTGTTCAAACCGTCTCCCCCGGCTCAACCGGCGGCCAAGCCGAACCGGAGTAAATCTGAGCACGTTAAGACGGAAATCGCGCAAGTGGTGGTCGACGCAAAGACTGGAAGATCGTACTGTAAAGGAAAGCTTTTGGGAAAGGGTGGTTTTGCACGATGTTATGAGATGACCGATCTTGCCAACAACAAGATGTATGCTGTGAAAGTTATTCCTCAGAGCAGAGTCTCAAAGCCACACCAGAGAGAGAAGATCATTAATGAAATCGAGCTCCACAAAAGCCTCCAACACAAGCATGTGGTGAAGTTTTCCCATCACTTTGAGGACCAAGACAACATTTACATCTTCCTTGAACTCTGCAGCAGAAAGTCTCTGGCACACATCTGGAAAGCAAGACATACGCTGACAGATCCAGAAGTACGTTACTACCTCAAACAGATCATATCTGCGCTCAAATACCTCCACAACAAAGGCATCCTCCACAGAGACCTCAAACTAGgtaatttttttgtgaatgaaaacatgGACTTGAGATTAGGAGATTTTGGGCTGGCAGCAAAGCTGGAGACAGTCGAGCAGAGGAAGAAGACCATCTGCGGGACTCCAAACTACCTGGCACCAGAGGTCTTAAACAGACAAGGCCATGGGACAGAGTCAGATGTTTGGTCGCTGGGTTGTGTAATGTACACACTTCTATGTGGGAATCCACCTTTTGAAACCTTAGACTTGAAAGAGACCTACAAGTGTATTAAGGAAGTGAGATACAGCCTTCCTCCTTCCCTCACTCCATCTGCACAGAAGCTGATCTCCGCAATCCTTCAGAAAAACCCGTCTGACCGCCTTACCCTGGATCAGATACTGGCCCACGAGTTTTTCACAAAGGGCTTCACCCCAGAAAAACTCCCTCCCAGCAGCTGTGTGATGGTGCCTGAGCTTAATCCTCCCAGCCCTGCCAAGAAGTTCTTCACCAAGATGGCTAAAAGCCTCTTTGGCAAGAAGAAATCGAAAGCTGTTGAAAAGACACCTTGTGAGGAGAAAGATGACATTTCTAAACTGGTTTCCGGCATGGTGAAGCACTCCATCGGTCGGCAAATGAGCTACAAGACAATGGGAGTGAATGAGGCCACTTCTCCCACGGTTCAACTGGCAAGCTCTGGCCCCCTGGACACCCCGGCCGAGGAAGAGTCCAGGAAGTCTGCATCCCGTTCCTTCAAAGGCACCGTCGCCAGCAGCACTGATGCTAGTGACGATATCCCTACCCCTGCAGCCGTAGCCGAATCTGCCATGAAGGTTCTTAACAGCTGCTTGTCTTCCATGCCGACAGCTTCAAGAAATCCACCCTGCCTTTCTAAAACCAAGCCTTTCATCTGGGTAACCAAGTGGGTCGACTACTCCAACAAGTACGGCTTTGGTTACCAGCTGTCCAATCAAAACGTCGGCGTACTCTTCAACGAAGGCACTCATCTGAGCCTGTGTGACCAGCGGAGGACTGTACGTTACTGTCTGACGAACAACAAACACTTTAGTTTTCCAGCTGACGCTTTACCAGAAAAGCTCCAGAGTCAAAAGCACATAGTGGATTTGATGGCTAACTACATGGAGCAGAACCTAATGGAGgGTGGTGATGTCAACTGTGAGGACCAGCCACCTCCAAGCTCTTCTCCATTGCTTCTGCAGTGGATCAAAACTGATCACGCCTTAGTCATGCTCTTTGACAACCGAACCTTACAGGTAAATTTTTACACAGACCATACAAAAATCATCCTGTCCAAGACGTCGGACTCCTCGTACCTGCTGACCTACATCAGCAAGGAGCGCGTCTCTTATTCCTACCCTCTGAACGTGCTTTCCGAATGGGGCTGCTCTCCGGAGCTCCGGCAGCGGCTTCATTACGTGGTCCAGCTTCTCCAGCACTACACCAACGCATAATGACTAAGAACTTCGATAACGATTTGCTGCTTACTGCTTCCATTTGAGAAGCGAAAAAGGactatgacaaaaaaaaaaaatcaggggAAGCTTCCACGTTGCCACGAAGATCTCCTGTCCTTGGTCATCGGCTGGCCTCTTTGAACTACCGTGCACTATTTTTcgtttggttttcttttgttgtttttgcgaCTGAGCCTACACCAACCGTATCACACTACCAGCTTGACTCACAGTGTGCACAACCAAAATTTGAGCCTGTtctttttatgatttgtttctttttagcTGGACTTGAAGTGCAGATGGCATAAAACTCACAGGGTTCTTAAGCGTCTTGCTTTTGCTCGCGGTGTCCCCATACACTGCTCGAGATGGGCTTGGCTTTTTATGCTCGATCActtggctttttttaaaaaggacattttatttcactaaaTAGTACACAAAACAAGAAGAGCTACGAACACCAAATGgttattctttttaatgagATTAGTTTTAAAGATGGCAGAGGTGAATGGCTGAGGTTGAACTGTAATTCATGGAGGAGCAGTTAGGAGCGGGAGAGACTAAAGTGCCTTTCTGATGGATTCCTCTGTGCAATAATGGCCCTGGACCTCAAGCTTAAGTCACAAAGGGAATGAAAGGTGCTTTATATGGCGTCTTCATATTCGGTTTTCCAAGCAAATTAGGCAGGAGTGGgagaaaaaaacactacaaataCACACCTGATATAAGCTTTTGCTGTTAAAAGTTATTATATCCTTTAATGTCTGTACTTGAGGAGAAAAAAGACTATGTATTCAGTGTGCCTCCAGCTTTGTTTACTTGACATGCTCCATCATAAGTAATCATAATGTCCTCAAAACTGTGACCATGGCTGTAAGTGTTAAATAAGTGTTCAGAAAACCAACATTGTGAAAGCCATTACCCTCAGACAAATCCTAActagtattattaattaattgtggCACgtgttctatttatttttttatttatagttttttatttattgatgtaacATAATTGTACGGTGTCAACACTGGGAAATGTTCAGTATGATCACTTTTTATGTATTGGGAGAGTGGGGGGGAATAAAGTTtattgaaaatata

Function


symbol description
plk3 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in Golgi disassembly; cellular response to DNA damage stimulus; and regulation of cell cycle process. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm; microtubule cytoskeleton; and nucleus. Is expressed in liver; spinal cord; and spleen. Orthologous to human PLK3 (polo like kinase 3).

NR:

description
serine/threonine-protein kinase PLK3-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08862 PLK3, CNK; polo-like kinase 3

RNA


RNA id representative length rna type GC content exon number start site end site
XM_043263630.1 True 3206 mRNA 0.45 15 16501052 16507898

Neighbor


gene id symbol gene type direction distance location
LOC122355504 cacybp,LOC107722060,LOC107658360,LOC107678928,LOC107726916,LOC107559063,LOC107563589 coding upstream 1350 16497709 ~ 16499702 (+)
mrps14 LOC107722064,LOC107563590,LOC107658361,LOC107678929,LOC107559053,LOC107726917 coding upstream 3831 16495941 ~ 16497221 (+)
tnr tnr,LOC107658355,LOC107726886,LOC107558359 coding upstream 57691 16325150 ~ 16443361 (+)
cop1 rfwd2,LOC107726924,LOC107678936,LOC107722073,LOC107658354 coding upstream 215494 16275070 ~ 16285558 (+)
astn1 astn1 coding upstream 276581 16031983 ~ 16224471 (+)
ankrd45 ankrd45,LOC107563586,LOC107658305,LOC107722043 coding downstream 37438 16545336 ~ 16547012 (+)
rasal2 rasal2,LOC107678931 coding downstream 53486 16561384 ~ 16612466 (+)
dhx9 dhx9 coding downstream 105878 16613776 ~ 16623033 (+)
lamc1 lamc1,LOC107658363,LOC107563558,LOC107557259,LOC107678923,LOC107722047 coding downstream 117947 16625845 ~ 16670329 (+)
lamc2 LOC107722066,LOC107658364,LOC107563561,LOC107678924,LOC107726891 coding downstream 169241 16677139 ~ 16689372 (+)
G12530 pappa2,LOC107568983,LOC107722077,LOC107558342,LOC107658303,LOC107678935,LOC107726923 non-coding upstream 236132 16263774 ~ 16264920 (+)
LOC122359940 LOC107743936,LOC101883431 non-coding upstream 466144 16032757 ~ 16034908 (+)
G12491 NA non-coding upstream 622648 15878134 ~ 15878404 (+)
G12451 NA non-coding upstream 689659 15810893 ~ 15811393 (+)
LOC122356092 NA non-coding upstream 758254 15731819 ~ 15742798 (+)
G12607 NA non-coding downstream 183028 16690926 ~ 16693619 (+)
G12669 NA non-coding downstream 276002 16783900 ~ 16784544 (+)
G12729 LOC107678904 non-coding downstream 319132 16827030 ~ 16829326 (+)
LOC122356672 NA non-coding downstream 322210 16830108 ~ 16839463 (+)
G12730 NA non-coding downstream 322751 16830649 ~ 16831883 (+)
LOC122323293 NA other upstream 44520 16450132 ~ 16456532 (+)
G12531 LOC107722077,LOC107568983 other upstream 232255 16267043 ~ 16268797 (+)
dars2 dars2,LOC107720851,LOC107700987,LOC107558296,LOC107599907 other upstream 625288 15860179 ~ 15875764 (+)
LOC122357435 LOC107733881,LOC107599885,LOC107657419 other upstream 1251803 15241797 ~ 15249249 (+)
ackr4a LOC107664061,LOC107751559,LOC107556724,LOC107751558,LOC107751560,LOC107713978,LOC107586293 other upstream 1718075 14776322 ~ 14782977 (+)
LOC122361622 NA other downstream 216716 16724614 ~ 16776351 (+)
golim4b golim4b,LOC107591324,LOC107684437,LOC107706331,LOC107559125,LOC107659375,LOC107738257 other downstream 524241 17032139 ~ 17039903 (+)
sppl2 sppl2,LOC107738168,LOC107706381,LOC107591351,LOC107659410,LOC107668984 other downstream 854347 17362245 ~ 17369102 (+)
G13114 tep1,LOC107591368,LOC107706362,LOC107659385,LOC107738210,LOC107591364,LOC107738151 other downstream 1058943 17566841 ~ 17567916 (+)
G13111 LOC107738210,LOC107591364 other downstream 1099354 17607252 ~ 17608092 (+)

Expression



Co-expression Network