G1375


Basic Information

Item Value
gene id G1375
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 2211443 ~ 2211769 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU1558
TGTCCAGAGTCGGGTTATAACTCATTGCAGATCTGCAGTGAGGCGAGGCTGGGCTCTCTCTGGCCAGGCTGGCTTCAGTGCGATGTGAACTCTCCCAGCATTCCTCACCCAGGACATCAGCGCAGGACAGGACTCCTGGATTACATGTACTGTACGTACACACGTACACCTGCAAACACAGTGGGACAGAAAGAATGTGTGGAAGAGAAATGAATATGTGGAAACCTGTTGTGATTTGTGTGCATTCCCCTCTGACTCTTTAGTCATCGTTCTCTCAACAATGTTGCAAGAAAGATCATTTTTTAAAATTTCTTAACCAAAAAAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1558 True 327 lncRNA 0.35 1 2211443 2211769

Neighbor

gene id symbol gene type direction distance location
CI01000000_02092375_02096188 POLR2B.L, RPB2, POLR2B coding upstream 115255 2092293 ~ 2096188 (+)
CI01000000_02080057_02086228 REST coding upstream 123933 2079831 ~ 2087510 (+)
CI01000000_02018856_02033091 EXOSC3 coding upstream 177064 2018597 ~ 2034379 (+)
CI01000000_01996254_01997531 GPR151 coding upstream 213826 1996074 ~ 1997617 (+)
CI01000000_01978179_01992602 PPP2R2BB, PPP2R2B, PPP2R2B.L coding upstream 218482 1978179 ~ 1992961 (+)
CI01000000_02237986_02243555 NA coding downstream 25925 2237694 ~ 2243820 (+)
CI01000000_02334112_02352906 NA coding downstream 121786 2333555 ~ 2353369 (+)
CI01000000_02496792_02498535 NA coding downstream 284975 2496744 ~ 2498594 (+)
CI01000000_02516813_02517287 NA coding downstream 305044 2516813 ~ 2517787 (+)
CI01000000_02534790_02541012 NA coding downstream 323021 2534790 ~ 2541023 (+)
G1373 NA non-coding upstream 3169 2207864 ~ 2208274 (+)
G1372 NA non-coding upstream 4341 2206763 ~ 2207102 (+)
G1357 NA non-coding upstream 18275 2192482 ~ 2193168 (+)
G1346 NA non-coding upstream 30033 2180986 ~ 2181410 (+)
G1345 NA non-coding upstream 30547 2180438 ~ 2180896 (+)
G1382 NA non-coding downstream 1418 2213187 ~ 2213923 (+)
G1388 NA non-coding downstream 15226 2226995 ~ 2227195 (+)
G1403 NA non-coding downstream 28521 2240290 ~ 2240657 (+)
G1439 NA non-coding downstream 56615 2268384 ~ 2268596 (+)
G1448 NA non-coding downstream 66621 2278390 ~ 2278640 (+)
G579 NA other upstream 302635 1767917 ~ 1908808 (+)
G435 NA other upstream 778589 1425121 ~ 1432854 (+)
G350 NA other upstream 1534506 671842 ~ 676937 (+)
G252 NA other upstream 1704371 503209 ~ 507072 (+)
G2774 NA other downstream 2242009 4453778 ~ 4454232 (+)
G2850 NA other downstream 2514217 4725986 ~ 4726482 (+)
G6811 NA other downstream 7993062 10204831 ~ 10321679 (+)
G6820 NA other downstream 8215454 10427223 ~ 10433018 (+)
G7018 NA other downstream 8766720 10978489 ~ 10980872 (+)

Expression


Co-expression Network