tmem68 (tmem68,LOC107674304,LOC107584594,LOC107714846,LOC107602519,LOC107729056,LOC107679320)


Basic Information

Item Value
gene id tmem68
gene name tmem68,LOC107674304,LOC107584594,LOC107714846,LOC107602519,LOC107729056,LOC107679320
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 12785128 ~ 12790107 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264411.1
TCCTGTTTGTGTCACATGTAAAGAGAGCCGGTTGAGTCAGGaaggaaaatatttattgaggGCAACGGTGTCTATTTTATCGAGGTATCATAATGGCACTGTTGTGAGTTTGGTATGTTTGGCCGAGCAACGCATTTCCGTTGGAAaagATCTGCCCTTTGGCAGATTGTTGCCTTGCTCAGCCCATCTGCCACTGGGAGAGGCTAACAGTGAAGCAGCATGTCCAGTGGGAATGAGTCCTGTCTGTTTAAGAACGGATCCATCAGCTTCTTCTCCTGCTTAGTTCACGTCTGGGAGGAGTGGGCAGGACTCGGGCAGCTCGAGGACTACCTCAGTTTCTTGGAGTATCTGCTATGGGTCTTCACACCTCTAGCCATAGTCTTCATTCTGCCTTTTCTCATAGTTATCTTCCTCTATCTGTCCATACTCTTCCTCCATGTATACAAACGCAAAAACCAATTGAGGGAAGCTTATTCCAATAACCTGTGGGATGGTGCGAGAAAAACTCTGGCAACCCTATGGGATGGACACGGTGCTATTTGGCACGGTTATGAAATCCATGGTTTAGAAAAGATTCCAGATGAAGGACCTGCTCTCATAGTCTACTATCATGGAGCTATTCCCATAGACTACTATTACTTCCTGGCAAGTGTTATCATTCAAAAGGGAAGAACTTGTCATTCGGTGGCTGATCATTTTCTGTTCAAGGTCCCAgGGTTTAAGCTCCTCTTGGAGGTGTTTAGTGTGATCCACGGGCCGCAGGAGGAGTGTGTGAAGGCCCTGCGCAACGGCCACCTCCTGGGCATCTCTCCTGGAGGAGTGCGGGAGGCCCTGTTCAGCGACGAGACCTACCCTCTGCTCTGGGGCAAACGCAAGGGATTTGCACAAGTGGCCATTGACTCTAAAGTGCCAGTTATACCCATGTTTACTCAAAACTTGAGGGAGGGATTTCGCTCTCTTGGGACGTTAAGGTTTTACCGCTGGGTGTATGAGAGGTTTCGTCTACCGATAGCACCCATTTATGGAGGTTTTCCAGTCAAATTTCGCACCTACTTGGGTGACCCCATTCCATACGACCCCAAGCTCAATGCAGCTGAGCTGGCGGAAAAGGTGCAACAGGCAGTTCAAGCACTTATCGACAAACACCAGAAGATACCTGGAAACATCCTCCGAGCTCTTCTAGAGCGATTCCAAAGGGAGCGCAAAGAAGATTAGCACACTTGCCTTCTCTCAgactgaacaaataaatatgctttaagCATAATTTAACTGAATACTGGagattttataatattgttacattataaaattaGGAAACGTTACTGACACTGTAATGGACGTATCGGCATATATCGCAATGTTGCATATCAAATAATGGTGCGTGTCTTTGTAACGTCTTTTTACATGTAGTCTTGTGCATGTCGAAGAgtgtttttgtgaacttttttaatatatatatatatatatatatatatatatatatata
>XM_043264420.1
GAGAGCCGGTTGAGTCAGGaaggaaaatatttattgaggGCAACGGTGTCTATTTTATCGAGGTATCATAATGTAAGTAGAttaagtaaaaacattattttttattcgcTTCTTCTAAAACATCAGTCTGTACGTTTAGTTTTTCGAGCGATCAGATGTGTAAGTTTGAAGACGTGTGTGACAGCTTTTTAAACACGTAAAATCTGGAGCTGTTTTAGGTTTGTTTGTCAATGAATGCTATCCACTGTTCAAGTGTAACTGCAGACAGAACGGTCTTCATGTGAATGATTTGTACGGCAGTCTCGCCCGTGACCGAGCGGGAGCTAACAGAATGAACAGATCTGCCCTTTGGCAGATTGTTGCCTTGCTCAGCCCATCTGCCACTGGGAGAGGCTAACAGTGAAGCAGCATGTCCAGTGGGAATGAGTCCTGTCTGTTTAAGAACGGATCCATCAGCTTCTTCTCCTGCTTAGTTCACGTCTGGGAGGAGTGGGCAGGACTCGGGCAGCTCGAGGACTACCTCAGTTTCTTGGAGTATCTGCTATGGGTCTTCACACCTCTAGCCATAGTCTTCATTCTGCCTTTTCTCATAGTTATCTTCCTCTATCTGTCCATACTCTTCCTCCATGTATACAAACGCAAAAACCAATTGAGGGAAGCTTATTCCAATAACCTGTGGGATGGTGCGAGAAAAACTCTGGCAACCCTATGGGATGGACACGGTGCTATTTGGCACGGTTATGAAATCCATGGTTTAGAAAAGATTCCAGATGAAGGACCTGCTCTCATAGTCTACTATCATGGAGCTATTCCCATAGACTACTATTACTTCCTGGCAAGTGTTATCATTCAAAAGGGAAGAACTTGTCATTCGGTGGCTGATCATTTTCTGTTCAAGGTCCCAgGGTTTAAGCTCCTCTTGGAGGTGTTTAGTGTGATCCACGGGCCGCAGGAGGAGTGTGTGAAGGCCCTGCGCAACGGCCACCTCCTGGGCATCTCTCCTGGAGGAGTGCGGGAGGCCCTGTTCAGCGACGAGACCTACCCTCTGCTCTGGGGCAAACGCAAGGGATTTGCACAAGTGGCCATTGACTCTAAAGTGCCAGTTATACCCATGTTTACTCAAAACTTGAGGGAGGGATTTCGCTCTCTTGGGACGTTAAGGTTTTACCGCTGGGTGTATGAGAGGTTTCGTCTACCGATAGCACCCATTTATGGAGGTTTTCCAGTCAAATTTCGCACCTACTTGGGTGACCCCATTCCATACGACCCCAAGCTCAATGCAGCTGAGCTGGCGGAAAAGGTGCAACAGGCAGTTCAAGCACTTATCGACAAACACCAGAAGATACCTGGAAACATCCTCCGAGCTCTTCTAGAGCGATTCCAAAGGGAGCGCAAAGAAGATTAGCACACTTGCCTTCTCTCAgactgaacaaataaatatgctttaagCATAATTTAACTGAATACTGGagattttataatattgttacattataaaattaGGAAACGTTACTGACACTGTAATGGACGTATCGGCATATATCGCAATGTTGCATATCAAATAATGGTGCGTGTCTTTGTAACGTCTTTTTACATGTAGTCTTGTGCATGTCGAAGAgtgtttttgtgaacttttttaatatatatatatatatatatatatatatatatatata
>XM_043264429.1
GTTGAGTCAGGaaggaaaatatttattgaggGCAACGGTGTCTATTTTATCGAGGTATCATAATTGTAACTGCAGACAGAACGGTCTTCATGTGAATGATTTGTACGGCAGTCTCGCCCGTGACCGAGCGGGAGCTAACAGAATGAACAGATCTGCCCTTTGGCAGATTGTTGCCTTGCTCAGCCCATCTGCCACTGGGAGAGGCTAACAGTGAAGCAGCATGTCCAGTGGGAATGAGTCCTGTCTGTTTAAGAACGGATCCATCAGCTTCTTCTCCTGCTTAGTTCACGTCTGGGAGGAGTGGGCAGGACTCGGGCAGCTCGAGGACTACCTCAGTTTCTTGGAGTATCTGCTATGGGTCTTCACACCTCTAGCCATAGTCTTCATTCTGCCTTTTCTCATAGTTATCTTCCTCTATCTGTCCATACTCTTCCTCCATGTATACAAACGCAAAAACCAATTGAGGGAAGCTTATTCCAATAACCTGTGGGATGGTGCGAGAAAAACTCTGGCAACCCTATGGGATGGACACGGTGCTATTTGGCACGGTTATGAAATCCATGGTTTAGAAAAGATTCCAGATGAAGGACCTGCTCTCATAGTCTACTATCATGGAGCTATTCCCATAGACTACTATTACTTCCTGGCAAGTGTTATCATTCAAAAGGGAAGAACTTGTCATTCGGTGGCTGATCATTTTCTGTTCAAGGTCCCAgGGTTTAAGCTCCTCTTGGAGGTGTTTAGTGTGATCCACGGGCCGCAGGAGGAGTGTGTGAAGGCCCTGCGCAACGGCCACCTCCTGGGCATCTCTCCTGGAGGAGTGCGGGAGGCCCTGTTCAGCGACGAGACCTACCCTCTGCTCTGGGGCAAACGCAAGGGATTTGCACAAGTGGCCATTGACTCTAAAGTGCCAGTTATACCCATGTTTACTCAAAACTTGAGGGAGGGATTTCGCTCTCTTGGGACGTTAAGGTTTTACCGCTGGGTGTATGAGAGGTTTCGTCTACCGATAGCACCCATTTATGGAGGTTTTCCAGTCAAATTTCGCACCTACTTGGGTGACCCCATTCCATACGACCCCAAGCTCAATGCAGCTGAGCTGGCGGAAAAGGTGCAACAGGCAGTTCAAGCACTTATCGACAAACACCAGAAGATACCTGGAAACATCCTCCGAGCTCTTCTAGAGCGATTCCAAAGGGAGCGCAAAGAAGATTAGCACACTTGCCTTCTCTCAgactgaacaaataaatatgctttaagCATAATTTAACTGAATACTGGagattttataatattgttacattataaaattaGGAAACGTTACTGACACTGTAATGGACGTATCGGCATATATCGCAATGTTGCATATCAAATAATGGTGCGTGTCTTTGTAACGTCTTTTTACATGTAGTCTTGTGCATGTCGAAGAgtgtttttgtgaacttttttaatatatatatatatatatatatatatatatatatata

Function

symbol description
tmem68 Predicted to enable acyltransferase activity. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Orthologous to human TMEM68 (transmembrane protein 68).

NR:

description
PREDICTED: transmembrane protein 68 isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016746 transferase activity, transferring acyl groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264411.1 False 1486 mRNA 0.45 8 12785128 12790107
XM_043264420.1 True 1676 mRNA 0.44 7 12785150 12790107
XM_043264429.1 False 1487 mRNA 0.45 8 12785158 12790107

Neighbor

gene id symbol gene type direction distance location
zswim5 zswim5,LOC107728925,LOC107674240,LOC107602525,LOC107584626,LOC107714849,LOC107679324 coding upstream 45290 12699932 ~ 12739838 (+)
elovl8a elovl8a,LOC107679337,LOC107602526,LOC107714853 coding upstream 120752 12660915 ~ 12664376 (+)
selenop2 LOC107679336,LOC107729074,LOC107674235 coding upstream 124686 12658046 ~ 12660442 (+)
si:ch73-382f3.1 si:ch73-382f3.1,LOC107586484,LOC107729092,LOC107602516,LOC107674450,LOC107714852,LOC107679322 coding upstream 128244 12653878 ~ 12656884 (+)
tesk2 tesk2,LOC107728975,LOC107679327,LOC107602527,LOC107714850,LOC107674209,LOC107585988 coding upstream 134718 12630031 ~ 12650410 (+)
buc buc,LOC107679335,LOC107584532,LOC107674330,LOC107567412,LOC107714843,LOC107728998 coding downstream 73758 12863865 ~ 12867056 (+)
mc4r mc4r,LOC107678942,LOC107714827,LOC107729066,LOC107586449 coding downstream 113025 12903132 ~ 12904941 (+)
cdh10a cdh10a,LOC107586427,LOC107667292,LOC107737811,LOC107567403,LOC107678940,LOC107716359,LOC108280231 coding downstream 337304 13127411 ~ 13146799 (+)
cdh12a cdh12a,LOC107716362,LOC107584489,LOC107687149,LOC107657054,LOC107706948,LOC107550696 coding downstream 384036 13174143 ~ 13213126 (+)
cdh18a cdh18,LOC107706951,LOC107686063,LOC107664087,LOC107716360 coding downstream 469636 13259743 ~ 13298145 (+)
G11622 NA non-coding upstream 25237 12745812 ~ 12759891 (+)
G11618 NA non-coding upstream 87834 12697086 ~ 12697294 (+)
G11595 dsela,LOC107679326,LOC107584692,LOC107728919,LOC107714854,LOC107674195 non-coding upstream 163714 12615995 ~ 12621414 (+)
G11593 NA non-coding upstream 170532 12614375 ~ 12614596 (+)
G11590 NA non-coding upstream 239536 12545353 ~ 12545592 (+)
LOC122362827 NA non-coding downstream 18965 12809072 ~ 12813327 (+)
G11740 NA non-coding downstream 525122 13315229 ~ 13466961 (+)
LOC122362453 NA non-coding downstream 578486 13368593 ~ 13410609 (+)
G11779 NA non-coding downstream 904212 13694319 ~ 13701326 (+)
G11812 NA non-coding downstream 1114461 13904568 ~ 13917191 (+)
LOC122358236 NA other upstream 158741 12623823 ~ 12626387 (+)
pld1a pld1a,LOC107688495,LOC107550602,LOC107680234,LOC107722545,LOC108442335 other upstream 847538 11908073 ~ 11937590 (+)
mast3a LOC107722547,LOC107688474,LOC107680242,LOC107550619,LOC107709878,LOC107586070 other upstream 1277424 11482104 ~ 11507704 (+)
rps28 NA other upstream 1340557 11422090 ~ 11444571 (+)
mrpl34 LOC107688463,LOC107585198,LOC107722555,LOC107680228 other upstream 1444017 11339735 ~ 11341111 (+)
rnf152 rnf152,LOC107729101,LOC107679332,LOC107567413,LOC107674343,LOC107714840,LOC107584540 other downstream 77822 12867929 ~ 12874008 (+)
G11854 jph1b,jph1,LOC107584332,LOC107550709,LOC107746914,LOC107732545,LOC107664083,LOC107686034,LOC107740042 other downstream 1385257 14175364 ~ 14179615 (+)
plxdc2a LOC107686089,LOC107713976,LOC107751571 other downstream 1956000 14746107 ~ 14753161 (+)
ackr4a LOC107664061,LOC107751559,LOC107556724,LOC107751558,LOC107751560,LOC107713978,LOC107586293 other downstream 1986215 14776322 ~ 14782977 (+)
LOC122357435 LOC107733881,LOC107599885,LOC107657419 other downstream 2451690 15241797 ~ 15249249 (+)

Expression


Co-expression Network