LOC122363040 (abhd4,LOC107713680,LOC107663512,LOC107655861,LOC107729967)


Basic Information

Item Value
gene id LOC122363040
gene name abhd4,LOC107713680,LOC107663512,LOC107655861,LOC107729967
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 25300200 ~ 25304723 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264908.1
ACGGTCTGTCTGTTTATGTGACAGATCCGGTAGCGAATACAGCCGTCCGAAGAAGCGTTATGTCAGTCTGTTCTTGTGGAGTTTTCCCGTACCGTACTGATACTAATGTCTCCTACAAACGCCGATGCAATGCAAGACGAGACTGACACCGAGCAGACCTCTGGGAACTGGTCTTGGTGGCCCTCTTGGAGACCAACATCCATGTCACTATTGAAAAGTGCCGAAGCTAAAATTCTCGCCTGTCTCCAGAATGACGTTTGGTCCAGGTTTGTGACGTTGCCAAATCAAAACCGAATATGGACCCTTAAAGTCACCGATAAATCAGCCCGCAAGCATAAAGCTGAAGCCGCTCAGACGCCCCTAGTGATGATCCACGGCTTTGGAGGCGGCGTCGGCCTCTGGATCCGAAACCTGGACGCTTTGAGTCAGTCTCGACCCGTCTACGCCTTCGACCTGCTGGGCTTCGGTCGCAGCTCTCGGCCCTCGTTCCCGTCTGACGCCTCGTTGGCTGAGGAGCAGTTTGTGTCTTCCATAGAGCACTGGAGACAGTCACTGGGGCTGGAGCGCATGATCCTATTGGGCCACAGCCTGGGTGGTTACCTGGCAACATCCTACACGATCCAACATCCGGAAAGAGTCAGTCACCTCATCCTGGTGGATGCGTGGGGTTTCCCTGAACGACTTCAGCCTCAGTTACAGGGGTCAGGAGGTCAAGGGTCAGAGGTTAAAAGGGTCTCACCTCCTCGCTGGGTGAAAGCTGTGGTGTCAGTGTTCAGCTTCTTCAACCCGCTGGCCGTCATCAGAGCGGCCGGACCCTGGGGTCCAGGGCTGGTGAACCGATTCCGTCCCGACTTCAAGAGGAAGTTTGAGGATCTGTTTGATGACGACACCATGACGCAGTATATTTATCACTGTAACGCTCAGAACCCGAGTGGTGAGGTGGGCTTTAAAGCCATGTGTGAGTCTCTCGGCTGGGCCAAGAGGCCGATGGTTCAGCGTGTTCATCTGCTGCCCCCGTCGATGCCCGTCAGCATGCTGTACGGCTCTCTGTCCTGGGTGGACTCGTCCACCGGAAACACGGTCGCTCAGATGCGAGGCAGAAGCCCCACCAGCATCACGCTGATCGAAGATGCTTCCCATCACGTCTACGCCGACCAGCCCGAAGAGTTCAACCGAGTGGTGGAGAGTATTTGTAATACTGTAGACTGAATAAGACGCGCATCGGTTTGTAGGTGTgggcatttgtattttttaatgtggGATCAGATTGATAGAAACATTTAAAGGCAAAGCTGTTCTCAGACCTTGTCGCTTCTATTCTAATTTTACTATTTGTGGCCTTCAACGCGGAAAGGCTCTGTGATTGTTCTGCAGGGTTTAACGGAAGCTGGCTGTGTTTGTATATTCGAAGCTATATTTTCTCCAGATTTCTTTTCAATCACGCACTGAGGAGGCTTCGCCGTTAAACCCGTGTCACGAATGCATTGACAATGTTTGGAAAGTCATATTGactaaaagaagaaatgtttaataattcac

Function

symbol description
abhd4 Predicted to enable lysophosphatidic acid acyltransferase activity and lysophospholipase activity. Predicted to be involved in lipid homeostasis and phosphatidic acid biosynthetic process. Predicted to be active in lipid droplet and mitochondrion. Orthologous to human ABHD4 (abhydrolase domain containing 4, N-acyl phospholipase B).

NR:

description
PREDICTED: protein ABHD4

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K13698 ABHD4; abhydrolase domain-containing protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264908.1 True 1539 mRNA 0.52 9 25300200 25304723

Neighbor

gene id symbol gene type direction distance location
crygn1 crygn1,LOC107600194,LOC107713687,LOC107655847,LOC107558278,LOC107696799,LOC107729968 coding upstream 80577 25216488 ~ 25219623 (+)
lrrc24 lrrc24,LOC107713676,LOC107655866,LOC107600207,LOC107757831,LOC107599237,LOC107663504 coding upstream 189424 25089791 ~ 25110776 (+)
eef1da eef1da,LOC107713671,LOC107757829,LOC107663523,LOC107599238,LOC107600209,LOC107655868 coding upstream 237690 25051270 ~ 25062510 (+)
trnal-uaa_14 NA coding upstream 249561 25050557 ~ 25050639 (+)
trnal-uaa_13 NA coding upstream 250514 25049604 ~ 25049686 (+)
LOC122322894 zcchc2,LOC107757820,LOC107662991,LOC107599249,LOC107713659 coding downstream 110796 25415519 ~ 25419928 (+)
LOC122358952 LOC107586591,LOC107722548 coding downstream 266418 25571141 ~ 25574135 (+)
LOC122358930 crtc1a,LOC107709901,LOC107680255,LOC107722627,LOC107585074 coding downstream 276077 25580800 ~ 25591012 (+)
G15225 NA non-coding upstream 89384 25105703 ~ 25210816 (+)
G15226 NA non-coding upstream 93270 25199691 ~ 25206930 (+)
G15233 LOC107600201 non-coding upstream 142965 25149255 ~ 25157235 (+)
G15240 NA non-coding upstream 155194 25123300 ~ 25145006 (+)
G15236 LOC107558270,LOC107558271,LOC107713634,LOC107655863,LOC107757833 non-coding upstream 185062 25111261 ~ 25115138 (+)
G15392 NA non-coding downstream 160727 25465450 ~ 25595289 (+)
LOC122362952 LOC107713688,LOC107600193,LOC107558294,LOC100331938,LOC107729982,LOC107655843,LOC107696796 other upstream 63591 25222144 ~ 25236609 (+)
G15224 abhd4,LOC107713680,LOC107663512,LOC107655861 other upstream 124912 25170736 ~ 25175288 (+)
zcchc2 zcchc2,LOC107713659,LOC107757820,LOC107599249 other upstream 545609 24687556 ~ 24754591 (+)
G15065 rorcb,LOC107600225,LOC107757806,LOC107698501,LOC107713654,LOC107662989 other upstream 800515 24493438 ~ 24499685 (+)
abhd17aa abhd17aa,LOC107599293,LOC107757810,LOC107698472,LOC107600230,LOC108433103,LOC105904035,LOC108280794 other upstream 1050209 24241872 ~ 24249991 (+)
LOC122327519 hecw1b,hecw1,LOC107600217,LOC107662981,LOC108280656,LOC107576258,LOC107656133 other downstream 89433 25394156 ~ 25406903 (+)
LOC122362387 LOC107722547,LOC107680242,LOC107550619,LOC107688474,LOC107709878 other downstream 187537 25492260 ~ 25516180 (+)
G15410 crsp7,LOC107722610,LOC107688472,LOC107585090,LOC107550620 other downstream 294738 25599461 ~ 25599926 (+)

Expression


Co-expression Network