LOC122328489 (LOC107750089,LOC107757802)


Basic Information

Item Value
gene id LOC122328489
gene name LOC107750089,LOC107757802
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 23994510 ~ 23995121 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247802.1
CTCAGTGACTTCAGCGATGAAATCAATGATTCTTATGAAGTGGACAATGTGGAGCGTATTCTCTGCTCAGATCTCAAGATGTGGAGGAGATTATCAGGGCAGTACAGCCTGTTTTTAAAGTGCGCCGGCTCCTGTCCCAGTACAAAGTCTCTTTTCTCAAGCATAGAGCTCACCCTGTCCGAAGACTCAGATAAAACTAGCAGTGACTGGAAAAACTTCCTACAAGCATATAACCGATGCAAAGG

Function

NR:

description
PREDICTED: uncharacterized protein LOC107750089

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247802.1 True 245 lncRNA 0.45 3 23994510 23995121

Neighbor

gene id symbol gene type direction distance location
LOC122323657 NA coding upstream 62621 23929631 ~ 23931889 (+)
LOC122323665 NA coding upstream 68879 23920231 ~ 23925631 (+)
hes6 hes6,LOC107737402,LOC107572989,LOC107728379,LOC107569265,LOC107679391 coding upstream 208255 23783724 ~ 23786255 (+)
lpar5a LOC107737401,LOC107698486,LOC107572991,LOC107679392,LOC107728381,LOC107569267 coding upstream 219327 23772880 ~ 23775183 (+)
LOC122356725 LOC107698487,LOC107737400,LOC107679394,LOC107572992,LOC107728385,LOC107569271,LOC793909 coding upstream 224018 23765958 ~ 23770492 (+)
LOC122328481 LOC107599284 coding downstream 62 23995183 ~ 23997150 (+)
LOC122324443 NA coding downstream 33883 24029004 ~ 24032203 (+)
LOC122327432 LOC107549368 coding downstream 76088 24071209 ~ 24073204 (+)
LOC122324938 NA coding downstream 84035 24079156 ~ 24081504 (+)
LOC122326195 NA coding downstream 114542 24109663 ~ 24111683 (+)
LOC122328475 NA non-coding upstream 8307 23985758 ~ 23986203 (+)
G14989 NA non-coding upstream 66897 23927294 ~ 23927613 (+)
G14988 NA non-coding upstream 67260 23927040 ~ 23927250 (+)
G14979 NA non-coding upstream 110094 23883762 ~ 23884416 (+)
G14978 NA non-coding upstream 114906 23879178 ~ 23879604 (+)
G14996 NA non-coding downstream 14404 24009525 ~ 24023608 (+)
G15026 LOC107600260,LOC107713623,LOC107757800,LOC107676328 non-coding downstream 146119 24141240 ~ 24141921 (+)
G15029 NA non-coding downstream 151013 24146134 ~ 24147389 (+)
G15039 LOC108433105 non-coding downstream 180164 24175285 ~ 24211058 (+)
G15041 NA non-coding downstream 191503 24186624 ~ 24250684 (+)
LOC122323670 NA other upstream 55494 23935921 ~ 23939016 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other upstream 446536 23545106 ~ 23547974 (+)
LOC122324535 NA other upstream 989256 23003165 ~ 23005254 (+)
fcer1gl LOC107671799 other upstream 1299180 22691199 ~ 22695330 (+)
LOC122327931 NA other upstream 1320235 22633529 ~ 22674275 (+)
LOC122327416 LOC107728372,LOC107569261,LOC107681443 other downstream 50564 24045685 ~ 24048465 (+)
LOC122327425 LOC107728372,LOC107569261,LOC107681443 other downstream 64291 24059412 ~ 24062202 (+)
LOC122327442 LOC107549368,LOC107569260,LOC107737397,LOC107681447,LOC107681444 other downstream 88717 24083838 ~ 24096897 (+)
abhd17aa abhd17aa,LOC107599293,LOC107757810,LOC107698472,LOC107600230,LOC108433103,LOC105904035,LOC108280794 other downstream 246751 24241872 ~ 24249991 (+)
G15065 rorcb,LOC107600225,LOC107757806,LOC107698501,LOC107713654,LOC107662989 other downstream 498317 24493438 ~ 24499685 (+)

Expression


Co-expression Network