LOC122328947


Basic Information

Item Value
gene id LOC122328947
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 14138060 ~ 14138149 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247862.1
GTTGTGGTTAATGATGTTGCTCTTTTTTCCCCGTCTTATCGACCGTGGTGATTCCTCTTGAAAATAAGCCTAATCCTCTGAAACCACCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247862.1 True 90 snoRNA 0.43 1 14138060 14138149

Neighbor

gene id symbol gene type direction distance location
trpa1a trpa1a,LOC107550712,LOC107732569,LOC107664053,LOC107751364 coding downstream 24325 14105263 ~ 14113735 (-)
shhb shhb,LOC107586383,LOC107751367,LOC107686079,LOC107664041,LOC107732558,LOC107550703 coding downstream 54596 14077992 ~ 14083464 (-)
cnpy1 LOC107550718,LOC107686078,LOC107586387,LOC107751369 coding downstream 86427 14042928 ~ 14051633 (-)
paxip1 paxip1,LOC107686023,LOC107550719,LOC107664085,LOC107584425 coding downstream 130163 13994788 ~ 14007897 (-)
c2h10orf67 LOC107751365,LOC107585965,LOC107686066,LOC107550695 coding downstream 209690 13911856 ~ 13928370 (-)
ube2wa ube2w,LOC107585923,LOC108280505,LOC107751351,LOC107686032,LOC107664038,LOC108435722 coding upstream 7884 14146033 ~ 14149244 (-)
elocb TCEB1,tceb1,tceb1b,LOC108426597 coding upstream 12021 14150170 ~ 14151983 (-)
jph1b jph1b,jph1,LOC107746914,LOC107550709,LOC107686034,LOC107584332,LOC108435725,LOC108280498 coding upstream 20185 14158334 ~ 14179577 (-)
cbln2a cbln2a,cbln2,LOC107586364,LOC107686082,LOC107550708,LOC107664049 coding upstream 90078 14228227 ~ 14231611 (-)
ctnnd2b ctnnd2b,LOC107746909,LOC107686039,LOC107550705,LOC107664081,LOC107732586 coding upstream 136815 14274964 ~ 14342633 (-)
G11958 NA non-coding downstream 33077 14101518 ~ 14104983 (-)
LOC122357571 NA non-coding downstream 107795 14016345 ~ 14030265 (-)
G11794 LOC101886882 non-coding downstream 345183 13748940 ~ 13792877 (-)
G11792 NA non-coding downstream 436749 13694319 ~ 13701311 (-)
G11770 NA non-coding downstream 665663 13471698 ~ 13472397 (-)
G11940 LOC107751355,LOC107686027,LOC107584387,LOC107550714,LOC107732566,LOC107664055 non-coding upstream 1333 14139482 ~ 14141857 (-)
G11966 NA non-coding upstream 51047 14189196 ~ 14189598 (-)
LOC122357595 NA non-coding upstream 52327 14190476 ~ 14191109 (-)
G11969 NA non-coding upstream 55426 14193575 ~ 14193812 (-)
G11982 NA non-coding upstream 110854 14249003 ~ 14250540 (-)
LOC122328470 ptbp1a,ptbp3,LOC107602545,LOC107674042,LOC107732511,LOC107584874,LOC107558691,LOC107658670,LOC107744247,LOC107729315,LOC107688524 other downstream 573695 13553773 ~ 13564365 (-)
LOC122323969 cahz,LOC107550722,LOC107755757,LOC107664098,LOC107686019,LOC107585971,LOC107751363,LOC108432254 other downstream 667797 13315229 ~ 13470263 (-)
xkr4 xkr4,zgc:123035,LOC107728991,LOC107679338,LOC107714844,LOC107674319,LOC106569249 other downstream 1299967 12789524 ~ 12838093 (-)
hltf hltf,LOC107688483,LOC107722619 other downstream 2523122 11592441 ~ 11614938 (-)
G11317 pde4ca,pde4c,LOC107722623,LOC107680260 other downstream 2560544 11576391 ~ 11577516 (-)
adcyap1b adcyap1b,adcyap1,LOC107713980,LOC107686049,LOC107751550,LOC107664073 other upstream 440846 14578995 ~ 14610266 (-)
faim2a faim2a,LOC107718029,LOC107701017,LOC107556958,LOC107657438,LOC107709826 other upstream 982438 15120587 ~ 15127491 (-)
smarcd3a smarcd3a,smarcd3,LOC107657439,LOC107599876,LOC107709803,LOC107556978,LOC107718026,LOC103039772 other upstream 995822 15133971 ~ 15153989 (-)
ccdc24 ccdc24,LOC107657456,LOC107599905 other upstream 1421514 15559663 ~ 15579706 (-)
pappa2 pappa2,LOC107722077,LOC107568983,LOC107678935,LOC107726923,LOC107658303,LOC107558342 other upstream 2086574 16224723 ~ 16268835 (-)

Expression


Co-expression Network